CRAN Package Check Results for Maintainer ‘Henrik Bengtsson <henrikb at braju.com>’

Last updated on 2026-02-28 19:50:46 CET.

Package ERROR NOTE OK
ACNE 14
aroma.affymetrix 3 11
aroma.apd 14
aroma.cn 14
aroma.core 3 11
calmate 2 12
dChipIO 14
doFuture 14
future 14
future.apply 14
future.batchtools 14
future.callr 14
future.mirai 14
future.tests 14
futureverse 14
futurize 14
globals 14
listenv 14
matrixStats 14
parallelly 1 13
port4me 14
profmem 14
progressr 14
PSCBS 14
R.cache 14
R.devices 14
R.filesets 14
R.huge 14
R.matlab 14
R.methodsS3 2 12
R.oo 14
R.rsp 14
R.utils 14
seguid 14
startup 14
TopDom 14

Package ACNE

Current CRAN status: OK: 14

Package aroma.affymetrix

Current CRAN status: NOTE: 3, OK: 11

Version: 3.2.3
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘AffymetrixDataTestFiles’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 3.2.3
Check: installed package size
Result: NOTE installed size is 6.2Mb sub-directories of 1Mb or more: R 3.1Mb help 1.1Mb testScripts 1.1Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package aroma.apd

Current CRAN status: OK: 14

Package aroma.cn

Current CRAN status: OK: 14

Package aroma.core

Current CRAN status: NOTE: 3, OK: 11

Version: 3.3.2
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'sfit', 'expectile', 'HaarSeg', 'mpcbs' Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package calmate

Current CRAN status: NOTE: 2, OK: 12

Version: 0.13.0
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Henrik Bengtsson <henrikb@braju.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package dChipIO

Current CRAN status: OK: 14

Package doFuture

Current CRAN status: OK: 14

Package future

Current CRAN status: OK: 14

Package future.apply

Current CRAN status: OK: 14

Package future.batchtools

Current CRAN status: OK: 14

Package future.callr

Current CRAN status: OK: 14

Package future.mirai

Current CRAN status: OK: 14

Package future.tests

Current CRAN status: OK: 14

Package futureverse

Current CRAN status: OK: 14

Package futurize

Current CRAN status: OK: 14

Package globals

Current CRAN status: OK: 14

Package listenv

Current CRAN status: OK: 14

Package matrixStats

Current CRAN status: OK: 14

Package parallelly

Current CRAN status: ERROR: 1, OK: 13

Version: 1.46.1
Check: tests
Result: ERROR Running 'test-all.equal.connection.R' [1s] Running 'test-as.cluster.R' [2s] Running 'test-autoStopCluster.R' [2s] Running 'test-availableConnections.R' [1s] Running 'test-availableCores.R' [1s] Running 'test-availableWorkers.R' [1s] Running 'test-cgroups.R' [4s] Running 'test-cli.R' [1s] Running 'test-cloneNode.R' [19s] Running 'test-cpuLoad.R' [1s] Running 'test-freeCores.R' [1s] Running 'test-freePort.R' [1s] Running 'test-isConnectionValid.R' [1s] Running 'test-isForkedChild.R' [2s] Running 'test-isForkedNode.R' [1s] Running 'test-isLocalhostNode.R' [2s] Running 'test-isNodeAlive.R' [7s] Running 'test-killNode.R' [20s] Running 'test-makeClusterMPI.R' [1s] Running 'test-makeClusterPSOCK.R' [23s] Running 'test-makeClusterSequential.R' [1s] Running 'test-makeNodePSOCK.R' [4s] Running 'test-options-and-envvars.R' [1s] Running 'test-r_bug18119.R' [1s] Running 'test-registerClusterTypes.R' [2s] Running 'test-serializedSize.R' [1s] Running 'test-startup.R' [1s] Running 'test-stealth_sample.R' [1s] Running 'test-supportsMulticore.R' [1s] Running 'test-utils,cluster.R' [1s] Running 'test-utils,conditions.R' [1s] Running 'test-utils,pid.R' [5s] Running 'test-utils.R' [4s] Running the tests in 'tests/test-isConnectionValid.R' failed. Complete output: > #! /usr/bin/env Rscript > ## This runs testme test script inst/testme/test-isConnectionValid.R > ## Don't edit - it was autogenerated by inst/testme/deploy.R > parallelly:::testme("isConnectionValid") Test 'isConnectionValid' ... > library(parallelly) > message("isConnectionValid() ...") isConnectionValid() ... > stopifnot(connectionId(stdin()) == 0) > stopifnot(connectionId(stdout()) == 1) > stopifnot(connectionId(stderr()) == 2) > con_no_id <- file(tempfile(), open = "w+") > class(con_no_id) <- c("test_connection", class(con_no_id)) > attr(con_no_id, "conn_id") <- NULL > res <- connectionId(con_no_id) Warning in for (ii in 1L:length(res)) { : closing unused connection 3 (D:\temp\2026_02_26_01_50_00_29184\RtmpaUvGFk\file8ee828ea7197) > stopifnot(is.na(res)) > close(con_no_id) Error in close.connection(con_no_id) : invalid connection Calls: <Anonymous> ... withVisible -> eval -> eval -> close -> close.connection Execution halted Flavor: r-devel-windows-x86_64

Package port4me

Current CRAN status: OK: 14

Package profmem

Current CRAN status: OK: 14

Package progressr

Current CRAN status: OK: 14

Package PSCBS

Current CRAN status: OK: 14

Package R.cache

Current CRAN status: OK: 14

Package R.devices

Current CRAN status: OK: 14

Package R.filesets

Current CRAN status: OK: 14

Package R.huge

Current CRAN status: OK: 14

Package R.matlab

Current CRAN status: NOTE: 14

Version: 3.7.0
Check: Rd files
Result: NOTE checkRd: (-1) setOption.Matlab.Rd:37-39: Lost braces in \itemize; meant \describe ? checkRd: (-1) setOption.Matlab.Rd:40-41: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package R.methodsS3

Current CRAN status: NOTE: 2, OK: 12

Version: 1.8.2
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Henrik Bengtsson <henrikb@braju.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package R.oo

Current CRAN status: OK: 14

Package R.rsp

Current CRAN status: OK: 14

Package R.utils

Current CRAN status: OK: 14

Package seguid

Current CRAN status: OK: 14

Package startup

Current CRAN status: OK: 14

Package TopDom

Current CRAN status: NOTE: 14

Version: 0.10.1
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Henrik Bengtsson <henrikb@braju.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.10.1
Check: Rd files
Result: NOTE checkRd: (-1) TopDom.Rd:21: Lost braces; missing escapes or markup? 21 | Recommended range is in {5, ..., 20}.} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64