CRAN Package Check Results for Maintainer ‘Toby Hocking <toby.hocking at r-project.org>’

Last updated on 2024-04-24 20:54:58 CEST.

Package ERROR NOTE OK
animint2 7 6
atime 3 10
aum 12
binsegRcpp 12
directlabels 13
FLOPART 12
inlinedocs 12
LOPART 12
mlr3resampling 13
nc 13
neuroblastoma 7 5
PeakError 12
PeakSegDisk 12
PeakSegDP 13
PeakSegJoint 13
PeakSegOptimal 13
penaltyLearning 13
plotHMM 12
WeightedROC 7 5

Package animint2

Current CRAN status: NOTE: 7, OK: 6

Version: 2024.1.24
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: stat_unique.html:110:1 (stat_unique.Rd:65): Warning: trimming empty <li> stat_unique.html:109:1 (stat_unique.Rd:65): Warning: trimming empty <ul> Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-windows-x86_64

Package atime

Current CRAN status: ERROR: 3, OK: 10

Version: 2024.4.17
Check: tests
Result: ERROR Running ‘testthat.R’ [8s/15s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > if(require(testthat))test_check("atime") Loading required package: testthat Loading required package: atime [ FAIL 2 | WARN 0 | SKIP 0 | PASS 41 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-CRAN.R:70:3'): more units defined in 1 row result ──────────── `disp.units` not identical to `expected.units`. Lengths differ: 4 is not 5 ── Failure ('test-CRAN.R:82:3'): more units defined in 1 row result ──────────── `{ ... }` threw an error with unexpected message. Expected match: "foobar is not a valid unit; argument names of predict must be one of these valid units: int, kilobytes, match.len, num, seconds" Actual message: "foobar is not a valid unit; argument names of predict must be one of these valid units: int, match.len, num, seconds" Backtrace: ▆ 1. ├─testthat::expect_error(...) at test-CRAN.R:82:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. ├─stats::predict(ref.list, foobar = 0) at test-CRAN.R:83:5 7. └─atime:::predict.references_best(ref.list, foobar = 0) 8. ├─...[] 9. └─data.table::`[.data.table`(...) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 41 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2024.4.17
Check: tests
Result: ERROR Running ‘testthat.R’ [14s/17s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > if(require(testthat))test_check("atime") Loading required package: testthat Loading required package: atime [ FAIL 2 | WARN 0 | SKIP 0 | PASS 41 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-CRAN.R:70:3'): more units defined in 1 row result ──────────── `disp.units` not identical to `expected.units`. Lengths differ: 4 is not 5 ── Failure ('test-CRAN.R:82:3'): more units defined in 1 row result ──────────── `{ ... }` threw an error with unexpected message. Expected match: "foobar is not a valid unit; argument names of predict must be one of these valid units: int, kilobytes, match.len, num, seconds" Actual message: "foobar is not a valid unit; argument names of predict must be one of these valid units: int, match.len, num, seconds" Backtrace: ▆ 1. ├─testthat::expect_error(...) at test-CRAN.R:82:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. ├─stats::predict(ref.list, foobar = 0) at test-CRAN.R:83:5 7. └─atime:::predict.references_best(ref.list, foobar = 0) 8. ├─...[] 9. └─data.table::`[.data.table`(...) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 41 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2024.4.17
Check: tests
Result: ERROR Running ‘testthat.R’ [13s/15s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > if(require(testthat))test_check("atime") Loading required package: testthat Loading required package: atime [ FAIL 2 | WARN 0 | SKIP 0 | PASS 41 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-CRAN.R:70:3'): more units defined in 1 row result ──────────── `disp.units` not identical to `expected.units`. Lengths differ: 4 is not 5 ── Failure ('test-CRAN.R:82:3'): more units defined in 1 row result ──────────── `{ ... }` threw an error with unexpected message. Expected match: "foobar is not a valid unit; argument names of predict must be one of these valid units: int, kilobytes, match.len, num, seconds" Actual message: "foobar is not a valid unit; argument names of predict must be one of these valid units: int, match.len, num, seconds" Backtrace: ▆ 1. ├─testthat::expect_error(...) at test-CRAN.R:82:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. ├─stats::predict(ref.list, foobar = 0) at test-CRAN.R:83:5 7. └─atime:::predict.references_best(ref.list, foobar = 0) 8. ├─...[] 9. └─data.table::`[.data.table`(...) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 41 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Package aum

Current CRAN status: OK: 12

Package binsegRcpp

Current CRAN status: OK: 12

Package directlabels

Current CRAN status: OK: 13

Package FLOPART

Current CRAN status: OK: 12

Package inlinedocs

Current CRAN status: OK: 12

Package LOPART

Current CRAN status: OK: 12

Package mlr3resampling

Current CRAN status: OK: 13

Package nc

Current CRAN status: OK: 13

Package neuroblastoma

Current CRAN status: NOTE: 7, OK: 5

Version: 2023.9.3
Check: installed package size
Result: NOTE installed size is 7.9Mb sub-directories of 1Mb or more: data 7.8Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package PeakError

Current CRAN status: OK: 12

Package PeakSegDisk

Current CRAN status: OK: 12

Package PeakSegDP

Current CRAN status: OK: 13

Package PeakSegJoint

Current CRAN status: OK: 13

Package PeakSegOptimal

Current CRAN status: OK: 13

Package penaltyLearning

Current CRAN status: OK: 13

Package plotHMM

Current CRAN status: OK: 12

Package WeightedROC

Current CRAN status: NOTE: 7, OK: 5

Version: 2020.1.31
Check: Rd files
Result: NOTE checkRd: (-1) WeightedROC.Rd:10: Lost braces; missing escapes or markup? 10 | integer/numeric with values all in {0=negative,1=positive} or | ^ checkRd: (-1) WeightedROC.Rd:11: Lost braces; missing escapes or markup? 11 | {1=negative,2=positive} or {-1=negative,1=positive}.} | ^ checkRd: (-1) WeightedROC.Rd:11: Lost braces; missing escapes or markup? 11 | {1=negative,2=positive} or {-1=negative,1=positive}.} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-windows-x86_64