CRAN Package Check Results for Maintainer Peter Carbonetto <peter.carbonetto at gmail.com>

CRAN Package Check Results for Maintainer ‘Peter Carbonetto <peter.carbonetto at gmail.com>’

Last updated on 2026-02-28 19:50:54 CET.

Package	WARN	NOTE	OK
EbayesThresh			14
ebnm			14
fastTopics	1	2	11
mashr		4	10
mixsqp			14
mr.mashr		3	11
susieR			14
varbvs			14

Package ebnm

Current CRAN status: OK: 14

Package fastTopics

Current CRAN status: WARN: 1, NOTE: 2, OK: 11

Version: 0.7-38
Check: installed package size
Result: NOTE installed size is 14.3Mb sub-directories of 1Mb or more: data 7.2Mb doc 1.9Mb libs 4.7Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.7-38
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.7-38
Check: for unstated dependencies in ‘tests’
Result: WARN Warning: unable to access index for repository https://bioconductor.org/packages/3.20/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.20/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.20/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.20/data/experiment/src/contrib/PACKAGES' Flavor: r-oldrel-windows-x86_64

Package mashr

Current CRAN status: NOTE: 4, OK: 10

Version: 0.2.79
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘softImpute’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.2.79
Check: installed package size
Result: NOTE installed size is 8.3Mb sub-directories of 1Mb or more: libs 7.4Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package mixsqp

Current CRAN status: OK: 14

Package mr.mashr

Current CRAN status: NOTE: 3, OK: 11

Version: 0.3.44
Check: installed package size
Result: NOTE installed size is 7.0Mb sub-directories of 1Mb or more: doc 1.1Mb libs 5.6Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.3.44
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package susieR

Current CRAN status: OK: 14

Package varbvs

Current CRAN status: OK: 14