CRAN Package Check Results for Maintainer Carl Boettiger <cboettig at gmail.com>

CRAN Package Check Results for Maintainer ‘Carl Boettiger <cboettig at gmail.com>’

Last updated on 2026-04-29 21:49:08 CEST.

Package	WARN	NOTE	OK
arkdb			13
codemeta			13
codemetar			13
contentid			13
duckdbfs			13
earthdatalogin			13
EcoNetGen		2	11
EML			13
emld			13
gbifdb		2	11
knitcitations			13
minioclient			13
neonstore		13
piggyback			13
pmc			13
rcloner			13
rdflib			13
rfishbase			13
RNeXML		13
roxigraph		1	12
sarsop	1		12
taxadb		13
taxalight		2	11
treebase			13
virtuoso			13

Package arkdb

Current CRAN status: OK: 13

Version: 0.2.4
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’ The Description field contains <arXiv:1708.01242>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package EML

Current CRAN status: OK: 13

Package emld

Current CRAN status: OK: 13

Package gbifdb

Current CRAN status: NOTE: 2, OK: 11

Version: 1.0.0
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’ The BugReports field in DESCRIPTION has https://github.com/ropensci/gbifdb which should likely be https://github.com/ropensci/gbifdb/issues instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package knitcitations

Current CRAN status: OK: 13

Package minioclient

Current CRAN status: OK: 13

Package neonstore

Current CRAN status: NOTE: 13

Version: 0.5.1
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘neon_cloud.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package piggyback

Current CRAN status: OK: 13

Package pmc

Current CRAN status: OK: 13

Package rcloner

Current CRAN status: OK: 13

Package rdflib

Current CRAN status: OK: 13

Package rfishbase

Current CRAN status: OK: 13

Package RNeXML

Current CRAN status: NOTE: 13

Version: 2.4.11
Check: Rd files
Result: NOTE checkRd: (-1) nexml_get.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:33: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:35: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package roxigraph

Current CRAN status: NOTE: 1, OK: 12

Version: 0.1.1
Check: compiled code
Result: NOTE File ‘roxigraph/libs/roxigraph.so’: Found non-API calls to R: ‘R_MissingArg’, ‘R_UnboundValue’ Compiled code should not call non-API entry points in R. See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual, and section ‘Moving into C API compliance’ for issues with the use of non-API entry points. Flavor: r-release-macos-x86_64

Package sarsop

Current CRAN status: WARN: 1, OK: 12

Additional issues

musl

Version: 0.6.16
Check: whether package can be installed
Result: WARN Found the following significant warnings: appl-0.96/PolicyGraph/PolicyGraphGenerator.cpp:53:65: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Evaluator/EvaluatorSampleEngine.cpp:150:68: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Evaluator/EvaluatorSampleEngine.cpp:176:68: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Evaluator/EvaluatorSampleEngine.cpp:201:81: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Bounds/BeliefValuePairPoolSet.h:62:64: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Algorithms/SARSOP/Sample.cpp:145:69: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Algorithms/SARSOP/Sample.cpp:163:73: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Algorithms/SARSOP/Sample.cpp:180:80: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Bounds/AlphaPlanePoolSet.h:62:64: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Algorithms/SARSOP/SARSOP.cpp:729:62: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Bounds/AlphaVectorPolicy.cpp:226:65: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Bounds/BackupAlphaPlaneMOMDP.cpp:222:78: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Bounds/BackupBeliefValuePairMOMDP.cpp:136:65: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Bounds/BackupBeliefValuePairMOMDP.cpp:146:65: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/Evaluator/Evaluator.cpp:192:64: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] appl-0.96/OfflineSolver/solver.cpp:375:69: warning: ISO C++20 considers use of overloaded operator '!=' (with operand types 'VariableContainer::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>') and 'momdp::SymbolSet<momdp::ValueSet>::iterator' (aka 'SymbolSetIterator<momdp::ValueSet>')) to be ambiguous despite there being a unique best viable function with non-reversed arguments [-Wambiguous-reversed-operator] See ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.6/sarsop.Rcheck/00install.out’ for details. * used C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ * used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ * used SDK: ‘NA’ Flavor: r-release-macos-x86_64

Package taxadb

Current CRAN status: NOTE: 13

Version: 0.2.1
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘parse_schema.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package taxalight

Current CRAN status: NOTE: 2, OK: 11

Version: 0.1.5
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’ The BugReports field in DESCRIPTION has https://github.com/cboettig/taxalight which should likely be https://github.com/cboettig/taxalight/issues instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package treebase

Current CRAN status: OK: 13

Package virtuoso

Current CRAN status: OK: 13