ushr: Understanding Suppression of HIV

Analyzes longitudinal data of HIV decline in patients on antiretroviral therapy using the canonical biphasic exponential decay model (pioneered, for example, by work in Perelson et al. (1997) <doi:10.1038/387188a0>; and Wu and Ding (1999) <doi:10.1111/j.0006-341X.1999.00410.x>). Model fitting and parameter estimation are performed, with additional options to calculate the time to viral suppression. Plotting and summary tools are also provided for fast assessment of model results.

Version: 0.2.3
Depends: dplyr (≥, tidyr (≥ 0.8.3), ggplot2 (≥ 3.1.1), stats
Suggests: GGally (≥ 1.4.0), knitr (≥ 1.22), rmarkdown (≥ 1.12), testthat (≥ 2.2.0)
Published: 2020-04-21
DOI: 10.32614/CRAN.package.ushr
Author: Sinead E. Morris ORCID iD [aut, cre], Luise Dziobek-Garrett [ctb], Andrew Yates [ctb]
Maintainer: Sinead E. Morris <sinead.morris at>
License: MIT + file LICENSE
NeedsCompilation: no
Citation: ushr citation info
Materials: NEWS
CRAN checks: ushr results


Reference manual: ushr.pdf
Vignettes: ushr


Package source: ushr_0.2.3.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): ushr_0.2.3.tgz, r-oldrel (arm64): ushr_0.2.3.tgz, r-release (x86_64): ushr_0.2.3.tgz, r-oldrel (x86_64): ushr_0.2.3.tgz
Old sources: ushr archive


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