readtextgrid

CRAN status R-CMD-check

readtextgrid parses Praat textgrids into R dataframes.

Installation

Install from CRAN:

install.packages("readtextgrid")

Install the development version from Github:

install.packages("remotes")
remotes::install_github("tjmahr/readtextgrid")

Basic example

Here is the example textgrid created by Praat. It was created using New -> Create TextGrid... with default settings in Praat.

This textgrid is bundled with this R package. We can locate the file with example_textgrid(). We read in the textgrid with read_textgrid().

library(readtextgrid)

# Locates path to an example textgrid bundled with this package
tg <- example_textgrid()

read_textgrid(path = tg)
#> # A tibble: 3 × 10
#>   file                    tier_num tier_name tier_type    tier_xmin tier_xmax
#>   <chr>                      <dbl> <chr>     <chr>            <dbl>     <dbl>
#> 1 Mary_John_bell.TextGrid        1 Mary      IntervalTier         0         1
#> 2 Mary_John_bell.TextGrid        2 John      IntervalTier         0         1
#> 3 Mary_John_bell.TextGrid        3 bell      TextTier             0         1
#>    xmin  xmax text  annotation_num
#>   <dbl> <dbl> <chr>          <int>
#> 1     0     1 ""                 1
#> 2     0     1 ""                 1
#> 3    NA    NA <NA>              NA

The dataframe contains one row per annotation: one row for each interval on an interval tier and one row for each point on a point tier. If a point tier has no points, it is represented with single row with NA values.

The columns encode the following information:

Reading in directories of textgrids

Suppose you have data on multiple speakers with one folder of textgrids per speaker. As an example, this package has a folder called speaker_data bundled with it representing 5 five textgrids from 2 speakers.

speaker-data
+-- speaker001
|   +-- s2T01.TextGrid
|   +-- s2T02.TextGrid
|   +-- s2T03.TextGrid
|   +-- s2T04.TextGrid
|   \-- s2T05.TextGrid
\-- speaker002
    +-- s2T01.TextGrid
    +-- s2T02.TextGrid
    +-- s2T03.TextGrid
    +-- s2T04.TextGrid
    \-- s2T05.TextGrid

First, we create a vector of file-paths to read into R.

# Get the path of the folder bundled with the package
data_dir <- system.file(package = "readtextgrid", "speaker-data")

# Get the full paths to all the textgrids
paths <- list.files(
  path = data_dir, 
  pattern = "TextGrid$",
  full.names = TRUE, 
  recursive = TRUE
)

We can use purrr::map_dfr()map the read_textgrid function over the paths and combine the dataframes (_dfr)—to read all these textgrids into R. But note that this way loses the speaker information.

library(purrr)

map_dfr(paths, read_textgrid)
#> # A tibble: 150 × 10
#>    file           tier_num tier_name tier_type    tier_xmin tier_xmax  xmin
#>    <chr>             <dbl> <chr>     <chr>            <dbl>     <dbl> <dbl>
#>  1 s2T01.TextGrid        1 words     IntervalTier         0      1.35 0    
#>  2 s2T01.TextGrid        1 words     IntervalTier         0      1.35 0.297
#>  3 s2T01.TextGrid        1 words     IntervalTier         0      1.35 0.522
#>  4 s2T01.TextGrid        1 words     IntervalTier         0      1.35 0.972
#>  5 s2T01.TextGrid        2 phones    IntervalTier         0      1.35 0    
#>  6 s2T01.TextGrid        2 phones    IntervalTier         0      1.35 0.297
#>  7 s2T01.TextGrid        2 phones    IntervalTier         0      1.35 0.36 
#>  8 s2T01.TextGrid        2 phones    IntervalTier         0      1.35 0.495
#>  9 s2T01.TextGrid        2 phones    IntervalTier         0      1.35 0.522
#> 10 s2T01.TextGrid        2 phones    IntervalTier         0      1.35 0.621
#>     xmax text    annotation_num
#>    <dbl> <chr>            <int>
#>  1 0.297 ""                   1
#>  2 0.522 "bird"               2
#>  3 0.972 "house"              3
#>  4 1.35  ""                   4
#>  5 0.297 "sil"                1
#>  6 0.36  "B"                  2
#>  7 0.495 "ER1"                3
#>  8 0.522 "D"                  4
#>  9 0.621 "HH"                 5
#> 10 0.783 "AW1"                6
#> # ℹ 140 more rows

We can use purrr::map2_dfr() and some dataframe manipulation to add the speaker information.

library(dplyr)

# This tells read_textgrid() to set the file column to the full path
data <- map2_dfr(paths, paths, read_textgrid) |> 
  mutate(
    # basename() removes the folder part from a path, 
    # dirname() removes the file part from a path
    speaker = basename(dirname(file)),
    file = basename(file),
  ) |> 
  select(
    speaker, everything()
  )

data
#> # A tibble: 150 × 11
#>    speaker    file           tier_num tier_name tier_type    tier_xmin tier_xmax
#>    <chr>      <chr>             <dbl> <chr>     <chr>            <dbl>     <dbl>
#>  1 speaker001 s2T01.TextGrid        1 words     IntervalTier         0      1.35
#>  2 speaker001 s2T01.TextGrid        1 words     IntervalTier         0      1.35
#>  3 speaker001 s2T01.TextGrid        1 words     IntervalTier         0      1.35
#>  4 speaker001 s2T01.TextGrid        1 words     IntervalTier         0      1.35
#>  5 speaker001 s2T01.TextGrid        2 phones    IntervalTier         0      1.35
#>  6 speaker001 s2T01.TextGrid        2 phones    IntervalTier         0      1.35
#>  7 speaker001 s2T01.TextGrid        2 phones    IntervalTier         0      1.35
#>  8 speaker001 s2T01.TextGrid        2 phones    IntervalTier         0      1.35
#>  9 speaker001 s2T01.TextGrid        2 phones    IntervalTier         0      1.35
#> 10 speaker001 s2T01.TextGrid        2 phones    IntervalTier         0      1.35
#>     xmin  xmax text    annotation_num
#>    <dbl> <dbl> <chr>            <int>
#>  1 0     0.297 ""                   1
#>  2 0.297 0.522 "bird"               2
#>  3 0.522 0.972 "house"              3
#>  4 0.972 1.35  ""                   4
#>  5 0     0.297 "sil"                1
#>  6 0.297 0.36  "B"                  2
#>  7 0.36  0.495 "ER1"                3
#>  8 0.495 0.522 "D"                  4
#>  9 0.522 0.621 "HH"                 5
#> 10 0.621 0.783 "AW1"                6
#> # ℹ 140 more rows

Another strategy would be to read the textgrid dataframes into a list column and unnest() them.

# Read dataframes into a list column
data_nested <- tibble(
  speaker = basename(dirname(paths)),
  data = map(paths, read_textgrid)
)

# We have one row per textgrid dataframe because `data` is a list column
data_nested
#> # A tibble: 10 × 2
#>    speaker    data              
#>    <chr>      <list>            
#>  1 speaker001 <tibble [13 × 10]>
#>  2 speaker001 <tibble [15 × 10]>
#>  3 speaker001 <tibble [16 × 10]>
#>  4 speaker001 <tibble [12 × 10]>
#>  5 speaker001 <tibble [19 × 10]>
#>  6 speaker002 <tibble [13 × 10]>
#>  7 speaker002 <tibble [15 × 10]>
#>  8 speaker002 <tibble [16 × 10]>
#>  9 speaker002 <tibble [12 × 10]>
#> 10 speaker002 <tibble [19 × 10]>

# promote the nested dataframes into the main dataframe
tidyr::unnest(data_nested, "data")
#> # A tibble: 150 × 11
#>    speaker    file  tier_num tier_name tier_type tier_xmin tier_xmax  xmin  xmax
#>    <chr>      <chr>    <dbl> <chr>     <chr>         <dbl>     <dbl> <dbl> <dbl>
#>  1 speaker001 s2T0…        1 words     Interval…         0      1.35 0     0.297
#>  2 speaker001 s2T0…        1 words     Interval…         0      1.35 0.297 0.522
#>  3 speaker001 s2T0…        1 words     Interval…         0      1.35 0.522 0.972
#>  4 speaker001 s2T0…        1 words     Interval…         0      1.35 0.972 1.35 
#>  5 speaker001 s2T0…        2 phones    Interval…         0      1.35 0     0.297
#>  6 speaker001 s2T0…        2 phones    Interval…         0      1.35 0.297 0.36 
#>  7 speaker001 s2T0…        2 phones    Interval…         0      1.35 0.36  0.495
#>  8 speaker001 s2T0…        2 phones    Interval…         0      1.35 0.495 0.522
#>  9 speaker001 s2T0…        2 phones    Interval…         0      1.35 0.522 0.621
#> 10 speaker001 s2T0…        2 phones    Interval…         0      1.35 0.621 0.783
#> # ℹ 140 more rows
#> # ℹ 2 more variables: text <chr>, annotation_num <int>

Other tips

Speeding things up

Do you have thousands of textgrids to read? The following workflow can speed things up. We are going to read the textgrids in parallel. We use the future package to manage the parallel computation. We use the furrr package to get future-friendly versions of the purrr functions. We tell future to use a multisession plan for parallelism: Do the extra computation on separate R sessions in the background. Then everything else is the same. Just replace map() with future_map().

library(future)
library(furrr)
plan(multisession, workers = 4)

data_nested <- tibble(
  speaker = basename(dirname(paths)),
  data = future_map(paths, read_textgrid)
)

By default, readtextgrid uses readr::guess_encoding() to determine the encoding of the textgrid before reading it in. But if you know the encoding beforehand, you can skip this guessing. In my limited testing, I found that setting the encoding could reduce benchmark times by 3–4% compared to guessing the encoding.

Here, we read 100 textgrids using different approaches to benchmark the results.

paths_bench <- sample(paths, 100, replace = TRUE)
bench::mark(
  lapply_guess = lapply(paths_bench, read_textgrid),
  lapply_set = lapply(paths_bench, read_textgrid, encoding = "UTF-8"),
  future_guess = future_map(paths_bench, read_textgrid),
  future_set = future_map(paths_bench, read_textgrid, encoding = "UTF-8"), 
  min_iterations = 5,
  check = TRUE
)
#> Warning: Some expressions had a GC in every iteration; so filtering is
#> disabled.
#> # A tibble: 4 × 6
#>   expression        min   median `itr/sec` mem_alloc `gc/sec`
#>   <bch:expr>   <bch:tm> <bch:tm>     <dbl> <bch:byt>    <dbl>
#> 1 lapply_guess    3.61s    3.67s     0.262  183.89MB     1.89
#> 2 lapply_set      3.52s    3.54s     0.278  176.01MB     1.61
#> 3 future_guess    1.33s    1.36s     0.732    5.14MB     0   
#> 4 future_set      1.24s    1.27s     0.783    5.14MB     0

Helpful columns

The following columns are often helpful:

Here is how to create them:

data |>
  # grouping needed for counting annotations per tier per file per speaker
  group_by(speaker, file, tier_num) |>
  mutate(
    duration = xmax - xmin,
    xmid = xmin + (xmax - xmin) / 2,
    total_annotations = sum(!is.na(annotation_num))
  ) |> 
  ungroup() |> 
  glimpse()
#> Rows: 150
#> Columns: 14
#> $ speaker           <chr> "speaker001", "speaker001", "speaker001", "speaker00…
#> $ file              <chr> "s2T01.TextGrid", "s2T01.TextGrid", "s2T01.TextGrid"…
#> $ tier_num          <dbl> 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 1, 1, 1, 2…
#> $ tier_name         <chr> "words", "words", "words", "words", "phones", "phone…
#> $ tier_type         <chr> "IntervalTier", "IntervalTier", "IntervalTier", "Int…
#> $ tier_xmin         <dbl> 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0…
#> $ tier_xmax         <dbl> 1.348571, 1.348571, 1.348571, 1.348571, 1.348571, 1.…
#> $ xmin              <dbl> 0.000, 0.297, 0.522, 0.972, 0.000, 0.297, 0.360, 0.4…
#> $ xmax              <dbl> 0.297000, 0.522000, 0.972000, 1.348571, 0.297000, 0.…
#> $ text              <chr> "", "bird", "house", "", "sil", "B", "ER1", "D", "HH…
#> $ annotation_num    <int> 1, 2, 3, 4, 1, 2, 3, 4, 5, 6, 7, 8, 9, 1, 2, 3, 4, 1…
#> $ duration          <dbl> 0.29700000, 0.22500000, 0.45000000, 0.37657143, 0.29…
#> $ xmid              <dbl> 0.148500, 0.409500, 0.747000, 1.160286, 0.148500, 0.…
#> $ total_annotations <int> 4, 4, 4, 4, 9, 9, 9, 9, 9, 9, 9, 9, 9, 4, 4, 4, 4, 1…

Launching Praat

This tip is written from the perspective of a Windows user who uses git bash for a terminal.

To open textgrids in Praat, you can tell R to call Praat from the command line. You have to know where the location of the Praat binary is though. I like to keep a copy in my project directories. So, assuming that Praat.exe in my working folder, the following would open the 10 textgrids in paths in Praat.

system2(
  command = "./Praat.exe",
  args = c("--open", paths),
  wait = FALSE
)

Limitations

readtextgrid supports textgrids created by Praat by using Save as text file.... It uses a parsing strategy based on regular expressions targeting indentation patterns and text flags in the file format. The formal specification of the textgrid format, however, is much more flexible. As a result, not every textgrid that Praat can open—especially the minimal “short text” files—is compatible with this package.

Acknowledgments

readtextgrid was created to process data from the WISC Lab project. Thus, development of this package was supported by NIH R01DC009411 and NIH R01DC015653.


Please note that the ‘readtextgrid’ project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.