pQTLdata: A Collection of Proteome Panels and Metadata
It aggregates protein panel data and metadata for protein quantitative
trait locus (pQTL) analysis using 'pQTLtools' (<https://jinghuazhao.github.io/pQTLtools/>).
The package includes data from affinity-based panels such as 'Olink' (<https://olink.com/>)
and 'SomaScan' (<https://somalogic.com/>), as well as mass spectrometry-based panels from
'CellCarta' (<https://cellcarta.com/>), 'Seer' (<https://seer.bio/>) and 'SWATH-MS'
(<doi:10.15252/msb.20178126>). The metadata encompasses updated annotations
and publication details.
| Version: |
0.6 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
knitr, Rdpack |
| Suggests: |
dplyr, grid, EnsDb.Hsapiens.v75, ensembldb, IRanges, org.Hs.eg.db, S4Vectors, VennDiagram |
| Published: |
2026-03-09 |
| DOI: |
10.32614/CRAN.package.pQTLdata |
| Author: |
Jing Hua Zhao 
[aut, cre] (0000-0003-4930-3582),
Uwe Ligges [ctb],
Benjamin Altmann [ctb],
Brian Ripley [ctb] |
| Maintainer: |
Jing Hua Zhao <jinghuazhao at hotmail.com> |
| BugReports: |
https://github.com/jinghuazhao/pQTLdata/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://jinghuazhao.github.io/pQTLdata/,
https://github.com/jinghuazhao/pQTLdata |
| NeedsCompilation: |
no |
| Materials: |
README, NEWS |
| CRAN checks: |
pQTLdata results |
Documentation:
Downloads:
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