## ----setup, include = FALSE--------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ## ----eval=FALSE--------------------------------------------------------------- # # Load required libraries # library(dplyr) # # # Generate example growth curve data # set.seed(123) # time <- 1:10 # biomass <- c(0.1, 0.3, 0.7, 1.5, 3.0, 5.0, 8.0, 12.0, 18.0, 25.0) # gr_curve <- data.frame(time = time, biomass = biomass) # # # Calculate lag for the Logistic model # lag_result <- calc_lag_fit_to_logistic_with_lag(gr_curve, n0 = 0.1, init_gr_rate = 0.5, init_K = 30, init_lag = 0.5) # # # Print the calculated lag # lag_result$lag_N ## ----eval= FALSE-------------------------------------------------------------- # # Load required libraries # library(dplyr) # # # Generate example growth curve data # set.seed(123) # time <- 1:10 # biomass <- c(0.1, 0.3, 0.7, 1.5, 3.0, 5.0, 8.0, 12.0, 18.0, 25.0) # gr_curve <- data.frame(time = time, biomass = biomass) # # # Calculate lag for the Baranyi model # lag_result <- calc_lag_fit_to_baranyi_with_lag(gr_curve, LOG10N0 = NULL, init_lag = NULL, init_mumax = NULL, init_LOG10Nmax = NULL, algorithm = "auto") # # # Print the calculated lag # lag_result$lag_N