--- title: "Validation and speed" author: "Muhammad Yaseen" date: last-modified format: html: self-contained: true number-sections: true toc: true toc-depth: 3 highlight-style: pygments code-tools: true html-math-method: mathjax vignette: > %\VignetteIndexEntry{Validation and speed} %\VignetteEngine{quarto::html} %\VignetteEncoding{UTF-8} execute: echo: true warning: false message: false --- {{< include _mhpfilter-macros.txt >}} ```{r setup, include = FALSE} # HTML figures are drawn as PNG and kept as WebP: lossless, or lossy at quality 90 when that is less than half the # size. The PDF figures stay vector graphics. Any failure of magick (not installed, no WebP, or a broken # installation whose system libraries are missing) keeps the PNG webp <- function(path) { if (knitr::is_latex_output() || !grepl(pattern = "[.]png$", x = path)) return(path) tryCatch( { if (!requireNamespace("magick", quietly = TRUE) || !isTRUE(magick::magick_config()$webp)) return(path) img <- magick::image_read(path) out <- sub(pattern = "[.]png$", replacement = ".webp", x = path) tmp <- tempfile(fileext = ".webp") magick::image_write( image = img , path = out , format = "webp" , quality = 100 , defines = c(`webp:lossless` = "true") ) magick::image_write(image = img, path = tmp, format = "webp", quality = 90) if (file.size(tmp) < file.size(out) / 2) file.copy(from = tmp, to = out, overwrite = TRUE) unlink(c(path, tmp)) out } , error = function(e) path ) } knitr::opts_chunk$set(collapse = FALSE, comment = "", fig.width = 7, fig.height = 4.2, dev = if (knitr::is_latex_output()) "cairo_pdf" else "ragg_png", dpi = 96, fig.process = webp) if (requireNamespace("mhpfilter", quietly = TRUE)) library(mhpfilter) else pkgload::load_all(export_all = FALSE, helpers = FALSE, quiet = TRUE) ``` # Abstract This vignette sets out how the results of the package are checked: against version 0.1.0, against direct dense computations, against the MATLAB code of the authors and against the published values. It ends with timings of this version against version 0.1.0. # Against version 0.1.0 The results of every exported function of version 0.1.0 were saved before the rewrite (`dev/legacy`), and the test `test-legacy.R` compares the new results with them: the smoothing parameters are identical, and the trends, cycles and criteria agree to $10^{-8}$. The names of the functions, their arguments and the components of their results are kept; new arguments come after the old ones. # Against dense computations The package never forms the $T \times T$ smoothing matrix. Forming it shows that the banded solves give the same trend: ```{r dense} x <- log(us_macro$gdp) T <- length(x) K <- diff(diag(T), differences = 2) A <- crossprod(K) fit <- hp_filter( x = x , lambda = 1600 , as_dt = FALSE , log_scale = FALSE ) max(abs(solve(a = diag(T) + 1600 * A, b = x) - fit$trend)) ``` The same holds for the fully modified filter, with the end-point weights it chose, in both forms: ```{r dense-weights} for (form in c("rows", "differences")) { f <- fmhp_filter( x = x , max_lambda = 3000L , k_linear = 15L , k_quadratic = NULL , alpha_linear = seq(from = 0, to = 2000, by = 10) , alpha_quadratic = seq(from = 0, to = 2000, by = 5) , schemes = c("linear", "quadratic") , form = form , lambda = NULL , log_scale = FALSE , as_dt = FALSE ) M <- if (form == "rows") diag(T) + diag(f$lambda_t) %*% A else diag(T) + t(K) %*% diag(f$lambda_t) %*% K cat(form, ":", max(abs(solve(a = M, b = x) - f$trend)), "\n") } ``` and the exact cross-validation computed from the eigenvalues of $\mA$ agrees with the trace of the dense smoothing matrix: ```{r dense-gcv} lam <- 683 B <- solve(diag(T) + lam * A) gcv_dense <- mean((x - B %*% x)^2) / (1 - sum(diag(B)) / T)^2 ex <- suppressWarnings( mhp_filter( x = x , max_lambda = 2000 , as_dt = FALSE , log_scale = FALSE , criterion = "exact" ) ) c(dense = gcv_dense, package = ex$gcv_path[lam]) ``` # Against the MATLAB code The tests carry line-by-line ports of the MATLAB functions of Choudhary et al. (2014) and Hanif et al. (2017), with dense matrices and explicit loops (`tests/testthat/helper-matlab.R`). `mhp_filter()` returns the same smoothing parameter as the first on 80 quarters of US GDP, with trend and cycle to $10^{-9}$; `fmhp_filter()` returns the same smoothing parameters and weights as the second on a simulated series, with losses to $10^{-10}$ and trend to $10^{-8}$. # Against the published values ```{r published} ref <- mhp_reference( source = NULL , evaluate = TRUE , level = 1 ) ref[, .(id, value, computed = round(x = computed, digits = 3), agrees)] ``` The one row that does not agree is annotated in the file and discussed in the vignette "Reproducing the fully modified HP filter"; the test of published values skips annotated rows. # Speed Version 0.1.0 solved a dense $T \times T$ system for every $\lambda$ of the search, $O(T^3)$ operations each. This version factors the pentadiagonal system in $O(T)$, and in the search updates the bands in place. The timings below were taken by `tools/bench.R` on simulated series (median of repeated runs, milliseconds) and are stored with the package: ```{r bench} b <- data.table::fread(system.file("extdata", "bench.csv", package = "mhpfilter")) w <- data.table::dcast(data = b, formula = case ~ version, value.var = "median_ms") v <- sort(unique(b$version)) w[, speedup := round(get(v[1]) / get(v[2]))] w ``` The cases are `hp_filter()` and `mhp_filter()` with 200 and 500 observations, the search up to $\lambda = 100000$ with 200 observations, and `mhp_batch()` with ten series of 200 observations. The gain grows with the length of the series, since the old cost per $\lambda$ grew as $T^3$ and the new one grows as $T$. # References Choudhary, M. A., Hanif, M. N. and Iqbal, J. (2014). On smoothing macroeconomic time series using the modified HP filter. *Applied Economics*, 46(19), 2205--2214. Hanif, M. N., Iqbal, J. and Choudhary, M. A. (2017). Fully modified HP filter. *SBP Working Paper Series*, No. 88, State Bank of Pakistan.