ivolcano 0.0.5
pathway_volcano() now highlights pathway genes in the
volcano plot after selection, while keeping all points and graying out
non-pathway genes.
- After pathway selection, recompute and render labels within the
pathway subset following
geom_ivolcano_gene() rules
(top_n/label_mode/label_sig_only).
- Fix an issue where volcano points/labels could be unintentionally
hidden after selection by caching and restoring original SVG
styles.
idotplot() removes deprecated ggplot2 usage (replace
aes_string() with tidy-eval).
ivolcano() adds
data-pval/data-logfc/data-sig
attributes to interactive points for front-end linkage.
geom_ivolcano_gene() writes label settings into
plot_env for pathway_volcano().
ivolcano 0.0.4
- explicitly call
knitr::knit_print when running in knitr
(2025-12-02, Tue)
- Add more
onclick functions (2025-12-01, Mon)
- onclick_ncbi to open NCBI Gene database.
- onclick_ensembl to open Ensembl database.
- onclick_hgnc to open HGNC symbol report.
- onclick_uniprot to search UniProt.
- onclick_pubmed to search PubMed for the gene.
ivolcano 0.0.3
- geom_ivolcano_line, geom_ivolcano_gene, and
scale_color_figuareya/scale_fill_figureya (2025-11-21, Fri)
ivolcano 0.0.2
ivolcano 0.0.1
- ivolcano
- onclick_fanyi
- onclick_genecards