gquad: Prediction of G Quadruplexes and Other Non-B DNA Motifs

Genomic biology is not limited to the confines of the canonical B-forming DNA duplex, but includes over ten different types of other secondary structures that are collectively termed non-B DNA structures. Of these non-B DNA structures, the G-quadruplexes are highly stable four-stranded structures that are recognized by distinct subsets of nuclear factors. This package provide functions for predicting intramolecular G quadruplexes. In addition, functions for predicting other intramolecular nonB DNA structures are included.

Version: 2.1-2
Depends: R (≥ 4.2.0)
Imports: ape (≥ 5.6-2), seqinr (≥ 4.2-23)
Suggests: knitr, rmarkdown
Published: 2022-11-29
DOI: 10.32614/CRAN.package.gquad
Author: Hannah O. Ajoge
Maintainer: Hannah O. Ajoge <ohuajo at>
License: Artistic-2.0
NeedsCompilation: no
CRAN checks: gquad results


Reference manual: gquad.pdf
Vignettes: Manuscript


Package source: gquad_2.1-2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): gquad_2.1-2.tgz, r-oldrel (arm64): gquad_2.1-2.tgz, r-release (x86_64): gquad_2.1-2.tgz, r-oldrel (x86_64): gquad_2.1-2.tgz
Old sources: gquad archive


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