--- title: "Benchmarking" output: rmarkdown::html_vignette vignette: > %\VignetteIndexEntry{Benchmarking} %\VignetteEngine{knitr::rmarkdown} %\VignetteEncoding{UTF-8} --- `inst/benchmarks/run-benchmark.R` reproduces a benchmark of `fastgbm` against `gbm`, `xgboost`, and `ranger` on six real survival datasets from the `biostatlab` package (`pbc`, `heart_failure`, `breast`, `colon_cancer`, `crc_mondaca2020`, `framingham`), under an equal-hyperparameter-grid regime with repeated 70/30 train/test splits. ```r # from the package root Rscript inst/benchmarks/run-benchmark.R ``` This writes, under `inst/benchmarks/`: * `benchmark-results.csv` -- one row per (dataset, model, repeat), with training time, prediction time, and Harrell's C-index; * `benchmark-summary.csv` -- median/IQR per (dataset, model), plus paired win/loss/tie counts of `fastgbm` against each competitor; * `parallel-speedup.csv` -- `threads = 1` vs. `threads = ` training time on the largest dataset (`framingham`); * `session-info.txt` -- R/package versions, OS, seed, and hyperparameters, for reproducibility. The full write-up, with tables and figures generated directly from these CSVs, is in `paper/fastgbm-benchmark.qmd` (renders to `fastgbm-benchmark.pdf` via `quarto render`). Results are reported honestly (win/loss/tie per dataset), not as a universal superiority claim -- see the paper's Comparative Summary section.