A collection of measures for measuring ecological diversity. Ecological diversity comes in two flavors: alpha diversity measures the diversity within a single site or sample, and beta diversity measures the diversity across two sites or samples. This package overlaps considerably with other R packages such as 'vegan', 'gUniFrac', 'betapart', and 'fossil'. We also include a wide range of functions that are implemented in software outside the R ecosystem, such as 'scipy', 'Mothur', and 'scikit-bio'. The implementations here are designed to be basic and clear to the reader.
Version: | 0.2.0 |
Imports: | ape |
Suggests: | testthat (≥ 2.1.0), vegan |
Published: | 2020-01-20 |
DOI: | 10.32614/CRAN.package.abdiv |
Author: | Kyle Bittinger [aut, cre] |
Maintainer: | Kyle Bittinger <kylebittinger at gmail.com> |
BugReports: | https://github.com/kylebittinger/abdiv/issues |
License: | MIT + file LICENSE |
URL: | https://github.com/kylebittinger/abdiv |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | abdiv results |
Reference manual: | abdiv.pdf |
Package source: | abdiv_0.2.0.tar.gz |
Windows binaries: | r-devel: abdiv_0.2.0.zip, r-release: abdiv_0.2.0.zip, r-oldrel: abdiv_0.2.0.zip |
macOS binaries: | r-devel (arm64): abdiv_0.2.0.tgz, r-release (arm64): abdiv_0.2.0.tgz, r-oldrel (arm64): abdiv_0.2.0.tgz, r-devel (x86_64): abdiv_0.2.0.tgz, r-release (x86_64): abdiv_0.2.0.tgz, r-oldrel (x86_64): abdiv_0.2.0.tgz |
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