MIDASim: Simulating Realistic Microbiome Data using 'MIDASim'
The 'MIDASim' package is a microbiome data simulator for generating realistic microbiome datasets by adapting a user-provided template. It supports the controlled introduction of experimental signals-such as shifts in taxon relative abundances, prevalence, and sample library sizes-to create distinct synthetic populations under diverse simulation scenarios. For more details, see He et al. (2024) <doi:10.1186/s40168-024-01822-z>.
Version: |
2.0 |
Depends: |
R (≥ 3.5.0) |
Imports: |
psych, MASS, pracma, scam, stats |
Suggests: |
vegan, phyloseq, rmarkdown, knitr, roxygen2, testthat |
Published: |
2025-07-05 |
Author: |
Mengyu He [aut, cre] |
Maintainer: |
Mengyu He <mhe44 at emory.edu> |
BugReports: |
https://github.com/mengyu-he/MIDASim/issues |
License: |
GPL-2 |
URL: |
https://github.com/mengyu-he/MIDASim |
NeedsCompilation: |
no |
CRAN checks: |
MIDASim results |
Documentation:
Downloads:
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