GxEScanR: Run GWAS/GWEIS Scans Using Binary Dosage Files

Tools to run genome-wide association study (GWAS) and genome-wide by environment interaction study (GWEIS) scans using the genetic data stored in a binary dosage file. The user provides a data frame with the subject's covariate data and the information about the binary dosage file returned by the BinaryDosage::getbdinfo() routine.

Version:	3.0.0
Depends:	R (≥ 3.5.0)
Imports:	lsReg, BinaryDosage
Suggests:	testthat (≥ 2.1.0), knitr, rmarkdown
Published:	2026-05-01
DOI:	10.32614/CRAN.package.GxEScanR
Author:	John Morrison [aut, cre], W. James Gauderman [aut], NCI [fnd] (CA196559), NCI [fnd] (CA201407), NIEHS [fnd] (ES007048), NHLBI [fnd] (HL115606)
Maintainer:	John Morrison <jmorr at usc.edu>
License:	GPL-3
NeedsCompilation:	no
Language:	en-US
Materials:	README, NEWS
CRAN checks:	GxEScanR results

Documentation:

Reference manual:	GxEScanR.html , GxEScanR.pdf
Vignettes:	Using GxEScanR (source, R code)

Downloads:

Package source:	GxEScanR_3.0.0.tar.gz
Windows binaries:	r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries:	r-release (arm64): GxEScanR_3.0.0.tgz, r-oldrel (arm64): GxEScanR_3.0.0.tgz, r-release (x86_64): GxEScanR_3.0.0.tgz, r-oldrel (x86_64): GxEScanR_3.0.0.tgz
Old sources:	GxEScanR archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=GxEScanR to link to this page.