CASMAP: Detection of Statistically Significant Combinations of SNPs in Association Mapping

A significant pattern mining-based toolbox for region-based genome-wide association studies and higher-order epistasis analyses, implementing the methods described in Llinares-López et al. (2017) <doi:10.1093/bioinformatics/btx071>.

Version: 0.6.1
Depends: R (≥ 3.0.2)
Imports: methods, Rcpp
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown
Published: 2020-05-05
DOI: 10.32614/CRAN.package.CASMAP
Author: Felipe Llinares-López [aut, cph], Laetitia Papaxanthos [aut, cph], Damian Roqueiro [aut, cph], Matthew Baker [ctr], Mikołaj Rybiński [ctr], Uwe Schmitt [ctr], Dean Bodenham [aut, cre, cph], Karsten Borgwardt [aut, fnd, cph]
Maintainer: Dean Bodenham <deanbodenhambsse at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
SystemRequirements: C++11
CRAN checks: CASMAP results


Reference manual: CASMAP.pdf
Vignettes: CASMAP-introduction


Package source: CASMAP_0.6.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): CASMAP_0.6.1.tgz, r-oldrel (arm64): CASMAP_0.6.1.tgz, r-release (x86_64): CASMAP_0.6.1.tgz, r-oldrel (x86_64): CASMAP_0.6.1.tgz
Old sources: CASMAP archive


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