Last updated on 2024-03-28 19:48:41 CET.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 0.2.1 | 26.80 | 267.50 | 294.30 | NOTE | |
r-devel-linux-x86_64-debian-gcc | 0.2.1 | 19.03 | 198.29 | 217.32 | NOTE | |
r-devel-linux-x86_64-fedora-clang | 0.2.1 | 396.35 | NOTE | |||
r-devel-linux-x86_64-fedora-gcc | 0.2.1 | 358.90 | NOTE | |||
r-devel-windows-x86_64 | 0.2.1 | 22.00 | 201.00 | 223.00 | ERROR | |
r-patched-linux-x86_64 | 0.2.1 | 27.39 | 252.29 | 279.68 | NOTE | |
r-release-linux-x86_64 | 0.2.1 | 24.47 | 256.21 | 280.68 | OK | |
r-release-macos-arm64 | 0.2.1 | 99.00 | OK | |||
r-release-macos-x86_64 | 0.2.1 | 168.00 | OK | |||
r-release-windows-x86_64 | 0.2.1 | 29.00 | 256.00 | 285.00 | OK | |
r-oldrel-macos-arm64 | 0.2.1 | 100.00 | OK | |||
r-oldrel-windows-x86_64 | 0.2.1 | 31.00 | 245.00 | 276.00 | OK |
Version: 0.2.1
Check: Rd files
Result: NOTE
checkRd: (-1) impute_plot.Rd:32: Lost braces; missing escapes or markup?
32 | \item{global}{Logical. If \code{TRUE} ({default}), a global density plot is
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64
Version: 0.2.1
Check: tests
Result: ERROR
Running 'testthat.R' [7s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(promor)
>
> test_check("promor")
0 empty row(s) removed.
2 empty column(s) removed.
1 protein(s) (rows) only identified by site removed.
4 protein(s) identified by 2 or fewer unique peptides removed.
Zeros have been replaced with NAs.
Data have been log-transformed.
4 proteins with higher than 33% NAs in at least one group removed.
0 empty row(s) removed.
4 empty column(s) removed.
10 protein contaminant(s) (rows) removed.
0 protein(s) identified by 2 or fewer unique peptides removed.
Zeros have been replaced with NAs.
Data have been log-transformed.
missForest iteration 1 in progress...done!
estimated error(s): 1.238942
difference(s): 0.01291771
time: 0.02 seconds
missForest iteration 2 in progress...done!
estimated error(s): 1.308915
difference(s): 0.002628932
time: 0 seconds
missForest iteration 3 in progress...done!
estimated error(s): 1.089121
difference(s): 0.006704341
time: 0.01 seconds
change in estimate: 0.02415548
change in estimate: 0.02101209
change in estimate: 0.01821531
change in estimate: 0.0157772
change in estimate: 0.01367284
change in estimate: 0.01186459
change in estimate: 0.01031291
change in estimate: 0.008980791
1 siginificantly differentially expressed proteins found.
Flavor: r-devel-windows-x86_64