CRAN Package Check Results for Package ordPens

Last updated on 2025-07-06 21:48:28 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.0 9.06 386.55 395.61 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.0 7.82 133.58 141.40 ERROR
r-devel-linux-x86_64-fedora-clang 1.1.0 616.54 OK
r-devel-linux-x86_64-fedora-gcc 1.1.0 625.51 OK
r-devel-windows-x86_64 1.1.0 13.00 359.00 372.00 NOTE
r-patched-linux-x86_64 1.1.0 12.30 380.37 392.67 NOTE
r-release-linux-x86_64 1.1.0 12.26 382.28 394.54 NOTE
r-release-macos-arm64 1.1.0 181.00 OK
r-release-macos-x86_64 1.1.0 405.00 OK
r-release-windows-x86_64 1.1.0 12.00 358.00 370.00 NOTE
r-oldrel-macos-arm64 1.1.0 168.00 OK
r-oldrel-macos-x86_64 1.1.0 270.00 OK
r-oldrel-windows-x86_64 1.1.0 17.00 502.00 519.00 OK

Check Details

Version: 1.1.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: ordAOV.Rd: LRTSim, RLRTSim, RLRsim, exactLRT, exactRLRT ordGene.Rd: LRTSim, RLRTSim ordSmooth.Rd: gam, mgcv Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 1.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘ordPCA.Rmd’ using rmarkdown Quitting from ordPCA.Rmd:135-141 [unnamed-chunk-11] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `princomp.default()`: ! cannot use 'cor = TRUE' with a constant variable --- Backtrace: ▆ 1. └─ordPens::ordPCA(...) 2. ├─stats::princomp(Qk, cor = TRUE) 3. └─stats:::princomp.default(Qk, cor = TRUE) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'ordPCA.Rmd' failed with diagnostics: cannot use 'cor = TRUE' with a constant variable --- failed re-building ‘ordPCA.Rmd’ --- re-building ‘ordPens.Rmd’ using rmarkdown --- finished re-building ‘ordPens.Rmd’ SUMMARY: processing the following file failed: ‘ordPCA.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc