Last updated on 2026-03-04 20:50:37 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.11.0 | 39.03 | 729.79 | 768.82 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.11.0 | 24.01 | 471.53 | 495.54 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.11.0 | 69.00 | 1188.07 | 1257.07 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.11.0 | 66.00 | 1215.06 | 1281.06 | OK | |
| r-devel-macos-arm64 | 0.11.0 | 8.00 | 120.00 | 128.00 | OK | |
| r-devel-windows-x86_64 | 0.11.0 | 37.00 | 488.00 | 525.00 | OK | |
| r-patched-linux-x86_64 | 0.10.0 | 52.10 | 746.38 | 798.48 | OK | |
| r-release-linux-x86_64 | 0.10.0 | 36.68 | 734.52 | 771.20 | OK | |
| r-release-macos-arm64 | 0.11.0 | 8.00 | 113.00 | 121.00 | OK | |
| r-release-macos-x86_64 | 0.11.0 | 28.00 | 883.00 | 911.00 | OK | |
| r-release-windows-x86_64 | 0.11.0 | 37.00 | 370.00 | 407.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.11.0 | 8.00 | 108.00 | 116.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.11.0 | 26.00 | 600.00 | 626.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.11.0 | 54.00 | 624.00 | 678.00 | ERROR |
Version: 0.11.0
Check: tests
Result: ERROR
Running 'testthat.R' [34s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes.
> test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1)
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_mlr_graphs_convert_types.R:
Error:
! testthat subprocess exited in file 'test_mlr_graphs_convert_types.R'.
Caused by error:
! R session crashed with exit code -1073741819
Backtrace:
▆
1. └─testthat::test_check("mlr3pipelines")
2. └─testthat::test_dir(...)
3. └─testthat:::test_files(...)
4. └─testthat:::test_files_parallel(...)
5. ├─withr::with_dir(...)
6. │ └─base::force(code)
7. ├─testthat::with_reporter(...)
8. │ └─base::tryCatch(...)
9. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
10. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
11. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
12. └─testthat:::parallel_event_loop_chunky(queue, reporters, ".")
13. └─queue$poll(Inf)
14. └─base::lapply(...)
15. └─testthat (local) FUN(X[[i]], ...)
16. └─private$handle_error(msg, i)
17. └─cli::cli_abort(...)
18. └─rlang::abort(...)
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.11.0
Check: examples
Result: ERROR
Running examples in ‘mlr3pipelines-Ex.R’ failed
The error most likely occurred in:
> ### Name: mlr_pipeops_nmf
> ### Title: Non-negative Matrix Factorization
> ### Aliases: mlr_pipeops_nmf PipeOpNMF
>
> ### ** Examples
>
> ## Don't show:
> if (mlr3misc::require_namespaces(c("NMF", "MASS"), quietly = TRUE)) withAutoprint({ # examplesIf
+ ## End(Don't show)
+ ## Don't show:
+ # NMF attaches these packages to search path on load, #929
+ lapply(c("package:Biobase", "package:BiocGenerics", "package:generics"), detach, character.only = TRUE)
+ ## End(Don't show)
+ library("mlr3")
+
+ task = tsk("iris")
+ pop = po("nmf")
+
+ task$data()
+ pop$train(list(task))[[1]]$data()
+
+ pop$state
+ ## Don't show:
+ # BiocGenerics overwrites printer for our tables mlr-org/mlr3#1112
+ # Necessary as detaching packages does not remove registered S3 methods
+ suppressWarnings(try(rm("format.list", envir = .BaseNamespaceEnv$.__S3MethodsTable__.), silent = TRUE))
+ ## End(Don't show)
+ ## Don't show:
+ }) # examplesIf
> lapply(c("package:Biobase", "package:BiocGenerics", "package:generics"),
+ detach, character.only = TRUE)
Error in FUN(X[[i]], ...) : invalid 'name' argument
Calls: withAutoprint ... withVisible -> eval -> eval -> lapply -> lapply -> FUN
Execution halted
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.11.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes.
> test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1)
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_multiplicities.R:
> test_multiplicities.R: [[1]]
> test_multiplicities.R: [1] 0
> test_multiplicities.R:
> test_multiplicities.R:
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
Saving _problems/test_pipeop_datefeatures-7.R
Saving _problems/test_pipeop_datefeatures-17.R
> test_pipeop_isomap.R: 2026-03-05 06:50:19.713722: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:19.71404: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:19.717107: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:19.723188: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:19.734109: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:19.734224: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:19.736682: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:19.742306: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:19.748987: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-05 06:50:19.749165: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:19.753613: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:19.768156: embedding
> test_pipeop_isomap.R: 2026-03-05 06:50:19.768501: DONE
> test_pipeop_isomap.R: 2026-03-05 06:50:19.774359: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-05 06:50:19.77448: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:19.778495: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:19.791647: embedding
> test_pipeop_isomap.R: 2026-03-05 06:50:19.791913: DONE
> test_pipeop_isomap.R: 2026-03-05 06:50:19.808904: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:19.809012: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:19.817694: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:19.851184: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:19.861085: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-05 06:50:19.861273: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:19.869523: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:19.947743: embedding
> test_pipeop_isomap.R: 2026-03-05 06:50:19.948744: DONE
> test_pipeop_isomap.R: 2026-03-05 06:50:19.98095: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:19.981072: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:19.988333: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:19.994708: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:20.002926: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.003074: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.00784: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.022254: embedding
> test_pipeop_isomap.R: 2026-03-05 06:50:20.022643: DONE
> test_pipeop_isomap.R: 2026-03-05 06:50:20.05506: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.055188: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.057399: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.063301: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:20.074121: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.074284: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.078642: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.093176: embedding
> test_pipeop_isomap.R: 2026-03-05 06:50:20.093501: DONE
> test_pipeop_isomap.R: 2026-03-05 06:50:20.119158: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.119279: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.12137: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.127491: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:20.138242: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.138406: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.142896: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.157938: embedding
> test_pipeop_isomap.R: 2026-03-05 06:50:20.158317: DONE
> test_pipeop_isomap.R: 2026-03-05 06:50:20.176297: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.176413: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.178642: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.184707: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:20.195948: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.196101: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.205328: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.219673: embedding
> test_pipeop_isomap.R: 2026-03-05 06:50:20.220127: DONE
> test_pipeop_isomap.R: 2026-03-05 06:50:20.235686: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.235792: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.237673: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.243538: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:20.25519: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.255368: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.259867: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.274621: embedding
> test_pipeop_isomap.R: 2026-03-05 06:50:20.275066: DONE
> test_pipeop_isomap.R: 2026-03-05 06:50:20.293892: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.294024: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.296333: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.302463: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:20.329867: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.330018: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.332134: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.338158: Classical Scaling
> test_pipeop_isomap.R: 2026-03-05 06:50:20.343542: Isomap START
> test_pipeop_isomap.R: 2026-03-05 06:50:20.343653: constructing knn graph
> test_pipeop_isomap.R: 2026-03-05 06:50:20.345824: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-05 06:50:20.351819: Classical Scaling
Saving _problems/test_pipeop_nmf-45.R
Saving _problems/test_pipeop_nmf-73.R
Saving _problems/test_pipeop_nmf-93.R
Saving _problems/test_pipeop_nmf-98.R
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
══ Skipped tests (128) ═════════════════════════════════════════════════════════
• On CRAN (125): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3',
'test_Graph.R:283:3', 'test_PipeOp.R:32:1', 'test_GraphLearner.R:5:3',
'test_GraphLearner.R:221:3', 'test_GraphLearner.R:343:3',
'test_GraphLearner.R:408:3', 'test_GraphLearner.R:571:3',
'test_doublearrow.R:2:1', 'test_gunion.R:2:1',
'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3',
'test_learner_weightedaverage.R:105:3',
'test_learner_weightedaverage.R:152:3', 'test_meta.R:39:3',
'test_dictionary.R:7:3', 'test_mlr_graphs_branching.R:26:3',
'test_mlr_graphs_bagging.R:6:3', 'test_mlr_graphs_robustify.R:5:3',
'test_pipeop_adas.R:8:3', 'test_pipeop_blsmote.R:8:3',
'test_pipeop_branch.R:4:3', 'test_pipeop_chunk.R:4:3',
'test_pipeop_boxcox.R:7:3', 'test_pipeop_classbalancing.R:7:3',
'test_pipeop_classweights.R:10:3', 'test_pipeop_classweightsex.R:9:3',
'test_pipeop_collapsefactors.R:6:3', 'test_pipeop_colapply.R:9:3',
'test_pipeop_copy.R:5:3', 'test_pipeop_colroles.R:6:3',
'test_pipeop_decode.R:14:3', 'test_pipeop_encode.R:21:3',
'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodepl.R:5:3',
'test_pipeop_encodepl.R:72:3', 'test_pipeop_ensemble.R:3:1',
'test_pipeop_encodelmer.R:15:3', 'test_pipeop_encodelmer.R:37:3',
'test_pipeop_encodelmer.R:80:3', 'test_pipeop_featureunion.R:9:3',
'test_pipeop_featureunion.R:134:3', 'test_pipeop_fixfactors.R:9:3',
'test_pipeop_filter.R:7:3', 'test_pipeop_histbin.R:7:3',
'test_pipeop_ica.R:7:3', 'test_pipeop_impute.R:4:3',
'test_pipeop_info.R:3:1', 'test_pipeop_imputelearner.R:43:3',
'test_pipeop_kernelpca.R:9:3', 'test_pipeop_isomap.R:10:3',
'test_pipeop_learner.R:17:3', 'test_pipeop_learnerpicvplus.R:2:1',
'test_pipeop_missind.R:6:3', 'test_pipeop_modelmatrix.R:7:3',
'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_multiplicityimply.R:9:3',
'test_pipeop_mutate.R:9:3', 'test_pipeop_nearmiss.R:7:3',
'test_pipeop_learnercv.R:3:3', 'test_pipeop_learnercv.R:43:3',
'test_pipeop_learnercv.R:73:3', 'test_pipeop_learnercv.R:92:3',
'test_pipeop_learnercv.R:141:3', 'test_pipeop_learnercv.R:157:3',
'test_pipeop_learnercv.R:203:3', 'test_pipeop_learnercv.R:249:3',
'test_pipeop_learnercv.R:278:3', 'test_pipeop_learnercv.R:332:3',
'test_pipeop_learnercv.R:359:3', 'test_pipeop_learnercv.R:389:3',
'test_pipeop_learnercv.R:399:3', 'test_pipeop_learnercv.R:432:3',
'test_pipeop_learnercv.R:472:3', 'test_pipeop_learnercv.R:481:3',
'test_pipeop_learnercv.R:498:3', 'test_pipeop_learnercv.R:506:3',
'test_pipeop_learnercv.R:530:3', 'test_pipeop_learnercv.R:554:3',
'test_pipeop_learnercv.R:634:3', 'test_pipeop_learnercv.R:654:3',
'test_pipeop_learnercv.R:669:3', 'test_pipeop_learnercv.R:754:3',
'test_pipeop_learnercv.R:799:3', 'test_pipeop_learnercv.R:827:3',
'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3',
'test_pipeop_proxy.R:2:1', 'test_pipeop_quantilebin.R:5:3',
'test_pipeop_randomprojection.R:6:3', 'test_pipeop_randomresponse.R:5:3',
'test_pipeop_removeconstants.R:6:3', 'test_pipeop_renamecolumns.R:6:3',
'test_pipeop_replicate.R:9:3', 'test_pipeop_rowapply.R:6:3',
'test_pipeop_scale.R:6:3', 'test_pipeop_scale.R:10:3',
'test_pipeop_scalemaxabs.R:6:3', 'test_pipeop_scalerange.R:7:3',
'test_pipeop_select.R:9:3', 'test_pipeop_smote.R:10:3',
'test_pipeop_smotenc.R:8:3', 'test_pipeop_spatialsign.R:3:1',
'test_pipeop_splines.R:3:1', 'test_pipeop_nmf.R:6:3',
'test_pipeop_targetinvert.R:4:3', 'test_pipeop_targetmutate.R:5:3',
'test_pipeop_targettrafo.R:4:3', 'test_pipeop_targettrafoscalerange.R:5:3',
'test_pipeop_subsample.R:6:3', 'test_pipeop_task_preproc.R:4:3',
'test_pipeop_task_preproc.R:14:3', 'test_pipeop_tomek.R:7:3',
'test_pipeop_textvectorizer.R:37:3', 'test_pipeop_textvectorizer.R:186:3',
'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3',
'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:7:3',
'test_ppl.R:63:3', 'test_pipeop_tunethreshold.R:111:3',
'test_pipeop_tunethreshold.R:191:3', 'test_typecheck.R:188:3'
• Skipping (1): 'test_GraphLearner.R:1278:3'
• empty test (2): 'test_pipeop_isomap.R:111:1', 'test_pipeop_missind.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pipeop_datefeatures.R:7:3'): PipeOpDateFeatures - basic properties ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:7:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_datefeatures.R:17:3'): PipeOpDateFeatures - finds POSIXct column ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:17:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_nmf.R:45:3'): PipeOpNMF - does not modify search path when NMF is not loaded, fix for #929 ──
Error in `detach(package:generics)`: invalid 'name' argument
Backtrace:
▆
1. └─base::detach(package:generics) at test_pipeop_nmf.R:45:3
── Failure ('test_pipeop_nmf.R:73:3'): PipeOpNMF - does not modify search path when NMF is loaded, fix for #929 ──
Expected `all(...)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test_pipeop_nmf.R:93:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Expected `all(paste0("package:", c("BiocGenerics", "generics")) %in% search())` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test_pipeop_nmf.R:98:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Error in `FUN(X[[i]], ...)`: invalid 'name' argument
This happened in PipeOp nmf's $train()
Backtrace:
▆
1. ├─op$train(list(tsk("iris"))) at test_pipeop_nmf.R:98:3
2. │ └─mlr3pipelines:::.__PipeOp__train(...)
3. │ ├─base::withCallingHandlers(...)
4. │ └─private$.train(input)
5. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train(...)
6. │ └─private$.train_task(intask)
7. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train_task(...)
8. │ ├─data.table::as.data.table(...)
9. │ └─private$.train_dt(dt, task$levels(cols), task$truth())
10. │ └─mlr3pipelines:::.__PipeOpNMF__.train_dt(...)
11. │ └─mlr3misc::map(to_be_detached, detach, character.only = TRUE)
12. │ └─base::lapply(.x, .f, ...)
13. │ └─base (local) FUN(X[[i]], ...)
14. │ └─base::stop("invalid 'name' argument")
15. └─base::.handleSimpleError(...)
16. └─mlr3pipelines (local) h(simpleError(msg, call))
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.11.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [259s/295s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes.
> test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1)
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_multiplicities.R:
> test_multiplicities.R: [[1]]
> test_multiplicities.R: [1] 0
> test_multiplicities.R:
> test_multiplicities.R:
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1]
> test_pipeop_blsmote.R: "Borderline-SMOTE done"
> test_pipeop_blsmote.R:
Saving _problems/test_pipeop_datefeatures-7.R
Saving _problems/test_pipeop_datefeatures-17.R
> test_pipeop_isomap.R: 2026-03-04 11:26:48.35286: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:48.35333: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:48.38348: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:48.421765: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:48.520902: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:48.521177: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:48.527557: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:48.597181: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:48.649333: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 11:26:48.649772: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:48.680142: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:48.792341: embedding
> test_pipeop_isomap.R: 2026-03-04 11:26:48.793464: DONE
> test_pipeop_isomap.R: 2026-03-04 11:26:48.849457: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 11:26:48.849761: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:48.887063: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:48.983388: embedding
> test_pipeop_isomap.R: 2026-03-04 11:26:49.006964: DONE
> test_pipeop_isomap.R: 2026-03-04 11:26:49.17584: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:49.17612: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:49.211828: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:49.463918: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:49.559994: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 11:26:49.560583: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:49.636571: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:50.161494: embedding
> test_pipeop_isomap.R: 2026-03-04 11:26:50.185789: DONE
> test_pipeop_isomap.R: 2026-03-04 11:26:50.539205: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:50.539534: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:50.562639: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:50.598854: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:50.657456: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 11:26:50.657875: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:50.709048: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:50.826167: embedding
> test_pipeop_isomap.R: 2026-03-04 11:26:50.827331: DONE
> test_pipeop_isomap.R: 2026-03-04 11:26:51.151812: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:51.152113: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:51.158975: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:51.210861: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:51.310845: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 11:26:51.311429: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:51.33613: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:51.471472: embedding
> test_pipeop_isomap.R: 2026-03-04 11:26:51.472576: DONE
> test_pipeop_isomap.R: 2026-03-04 11:26:51.641249: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:51.641536: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:51.659059: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:51.707233: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:51.798712: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 11:26:51.799151: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:51.844818: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:51.968212: embedding
> test_pipeop_isomap.R: 2026-03-04 11:26:51.969318: DONE
> test_pipeop_isomap.R: 2026-03-04 11:26:52.136737: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:52.137065: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:52.144062: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:52.21195: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:52.301825: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 11:26:52.302465: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:52.335456: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:52.43561: embedding
> test_pipeop_isomap.R: 2026-03-04 11:26:52.436751: DONE
> test_pipeop_isomap.R: 2026-03-04 11:26:52.589633: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:52.589969: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:52.611412: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:52.658054: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:52.746255: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-04 11:26:52.746863: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:52.823847: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:52.937532: embedding
> test_pipeop_isomap.R: 2026-03-04 11:26:52.938848: DONE
> test_pipeop_isomap.R: 2026-03-04 11:26:53.159748: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:53.160049: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:53.177867: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:53.220457: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:53.377589: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:53.378528: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:53.386678: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:53.438815: Classical Scaling
> test_pipeop_isomap.R: 2026-03-04 11:26:53.503876: Isomap START
> test_pipeop_isomap.R: 2026-03-04 11:26:53.504172: constructing knn graph
> test_pipeop_isomap.R: 2026-03-04 11:26:53.523483: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-04 11:26:53.562121: Classical Scaling
Saving _problems/test_pipeop_nmf-45.R
Saving _problems/test_pipeop_nmf-73.R
Saving _problems/test_pipeop_nmf-93.R
Saving _problems/test_pipeop_nmf-98.R
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
══ Skipped tests (128) ═════════════════════════════════════════════════════════
• On CRAN (125): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3',
'test_Graph.R:283:3', 'test_PipeOp.R:32:1', 'test_GraphLearner.R:5:3',
'test_GraphLearner.R:221:3', 'test_GraphLearner.R:343:3',
'test_GraphLearner.R:408:3', 'test_GraphLearner.R:571:3',
'test_doublearrow.R:2:1', 'test_gunion.R:2:1',
'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3',
'test_learner_weightedaverage.R:105:3',
'test_learner_weightedaverage.R:152:3', 'test_dictionary.R:7:3',
'test_meta.R:39:3', 'test_mlr_graphs_branching.R:26:3',
'test_mlr_graphs_bagging.R:6:3', 'test_mlr_graphs_robustify.R:5:3',
'test_pipeop_adas.R:8:3', 'test_pipeop_blsmote.R:8:3',
'test_pipeop_branch.R:4:3', 'test_pipeop_chunk.R:4:3',
'test_pipeop_classbalancing.R:7:3', 'test_pipeop_boxcox.R:7:3',
'test_pipeop_classweights.R:10:3', 'test_pipeop_classweightsex.R:9:3',
'test_pipeop_collapsefactors.R:6:3', 'test_pipeop_colapply.R:9:3',
'test_pipeop_copy.R:5:3', 'test_pipeop_colroles.R:6:3',
'test_pipeop_decode.R:14:3', 'test_pipeop_encode.R:21:3',
'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodepl.R:5:3',
'test_pipeop_encodepl.R:72:3', 'test_pipeop_ensemble.R:3:1',
'test_pipeop_encodelmer.R:15:3', 'test_pipeop_encodelmer.R:37:3',
'test_pipeop_encodelmer.R:80:3', 'test_pipeop_filter.R:7:3',
'test_pipeop_fixfactors.R:9:3', 'test_pipeop_histbin.R:7:3',
'test_pipeop_ica.R:7:3', 'test_pipeop_featureunion.R:9:3',
'test_pipeop_featureunion.R:134:3', 'test_pipeop_imputelearner.R:43:3',
'test_pipeop_info.R:3:1', 'test_pipeop_impute.R:4:3',
'test_pipeop_kernelpca.R:9:3', 'test_pipeop_isomap.R:10:3',
'test_pipeop_learner.R:17:3', 'test_pipeop_learnerpicvplus.R:2:1',
'test_pipeop_missind.R:6:3', 'test_pipeop_modelmatrix.R:7:3',
'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_multiplicityimply.R:9:3',
'test_pipeop_mutate.R:9:3', 'test_pipeop_nearmiss.R:7:3',
'test_pipeop_learnercv.R:3:3', 'test_pipeop_learnercv.R:43:3',
'test_pipeop_learnercv.R:73:3', 'test_pipeop_learnercv.R:92:3',
'test_pipeop_learnercv.R:141:3', 'test_pipeop_learnercv.R:157:3',
'test_pipeop_learnercv.R:203:3', 'test_pipeop_learnercv.R:249:3',
'test_pipeop_learnercv.R:278:3', 'test_pipeop_learnercv.R:332:3',
'test_pipeop_learnercv.R:359:3', 'test_pipeop_learnercv.R:389:3',
'test_pipeop_learnercv.R:399:3', 'test_pipeop_learnercv.R:432:3',
'test_pipeop_learnercv.R:472:3', 'test_pipeop_learnercv.R:481:3',
'test_pipeop_learnercv.R:498:3', 'test_pipeop_learnercv.R:506:3',
'test_pipeop_learnercv.R:530:3', 'test_pipeop_learnercv.R:554:3',
'test_pipeop_learnercv.R:634:3', 'test_pipeop_learnercv.R:654:3',
'test_pipeop_learnercv.R:669:3', 'test_pipeop_learnercv.R:754:3',
'test_pipeop_learnercv.R:799:3', 'test_pipeop_learnercv.R:827:3',
'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3',
'test_pipeop_proxy.R:2:1', 'test_pipeop_quantilebin.R:5:3',
'test_pipeop_randomprojection.R:6:3', 'test_pipeop_randomresponse.R:5:3',
'test_pipeop_removeconstants.R:6:3', 'test_pipeop_renamecolumns.R:6:3',
'test_pipeop_replicate.R:9:3', 'test_pipeop_rowapply.R:6:3',
'test_pipeop_scale.R:6:3', 'test_pipeop_scale.R:10:3',
'test_pipeop_scalemaxabs.R:6:3', 'test_pipeop_nmf.R:6:3',
'test_pipeop_scalerange.R:7:3', 'test_pipeop_select.R:9:3',
'test_pipeop_smotenc.R:8:3', 'test_pipeop_spatialsign.R:3:1',
'test_pipeop_splines.R:3:1', 'test_pipeop_smote.R:10:3',
'test_pipeop_targetinvert.R:4:3', 'test_pipeop_targetmutate.R:5:3',
'test_pipeop_targettrafo.R:4:3', 'test_pipeop_targettrafoscalerange.R:5:3',
'test_pipeop_task_preproc.R:4:3', 'test_pipeop_task_preproc.R:14:3',
'test_pipeop_subsample.R:6:3', 'test_pipeop_tomek.R:7:3',
'test_pipeop_textvectorizer.R:37:3', 'test_pipeop_textvectorizer.R:186:3',
'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3',
'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:7:3',
'test_ppl.R:63:3', 'test_pipeop_tunethreshold.R:111:3',
'test_pipeop_tunethreshold.R:191:3', 'test_typecheck.R:188:3'
• Skipping (1): 'test_GraphLearner.R:1278:3'
• empty test (2): 'test_pipeop_isomap.R:111:1', 'test_pipeop_missind.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pipeop_datefeatures.R:7:3'): PipeOpDateFeatures - basic properties ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:7:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_datefeatures.R:17:3'): PipeOpDateFeatures - finds POSIXct column ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:17:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_nmf.R:45:3'): PipeOpNMF - does not modify search path when NMF is not loaded, fix for #929 ──
Error in `detach(package:generics)`: invalid 'name' argument
Backtrace:
▆
1. └─base::detach(package:generics) at test_pipeop_nmf.R:45:3
── Failure ('test_pipeop_nmf.R:73:3'): PipeOpNMF - does not modify search path when NMF is loaded, fix for #929 ──
Expected `all(...)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test_pipeop_nmf.R:93:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Expected `all(paste0("package:", c("BiocGenerics", "generics")) %in% search())` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test_pipeop_nmf.R:98:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Error in `FUN(X[[i]], ...)`: invalid 'name' argument
This happened in PipeOp nmf's $train()
Backtrace:
▆
1. ├─op$train(list(tsk("iris"))) at test_pipeop_nmf.R:98:3
2. │ └─mlr3pipelines:::.__PipeOp__train(...)
3. │ ├─base::withCallingHandlers(...)
4. │ └─private$.train(input)
5. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train(...)
6. │ └─private$.train_task(intask)
7. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train_task(...)
8. │ ├─data.table::as.data.table(...)
9. │ └─private$.train_dt(dt, task$levels(cols), task$truth())
10. │ └─mlr3pipelines:::.__PipeOpNMF__.train_dt(...)
11. │ └─mlr3misc::map(to_be_detached, detach, character.only = TRUE)
12. │ └─base::lapply(.x, .f, ...)
13. │ └─base (local) FUN(X[[i]], ...)
14. │ └─base::stop("invalid 'name' argument")
15. └─base::.handleSimpleError(...)
16. └─mlr3pipelines (local) h(simpleError(msg, call))
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 0.11.0
Check: tests
Result: ERROR
Running 'testthat.R' [241s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes.
> test_Graph.R: Training debug.multi with input list(input_1 = 1, input_2 = 1)
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_PipeOp.R: Training test_autotrain
> test_PipeOp.R: Predicting test_autotrain
> test_multiplicities.R:
> test_multiplicities.R:
> test_multiplicities.R: [[1]]
> test_multiplicities.R: [1] 0
> test_multiplicities.R:
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
> test_pipeop_blsmote.R: [1] "Borderline-SMOTE done"
Saving _problems/test_pipeop_datefeatures-7.R
Saving _problems/test_pipeop_datefeatures-17.R
> test_pipeop_isomap.R: 2026-03-02 22:04:20.449788: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:20.450847: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:20.464997: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:20.484803: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:20.557764: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:20.55837: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:20.569669: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:20.590593: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:20.633154: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:20.634032: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:20.656897: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:20.707449: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:20.709322: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:20.754579: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:20.755272: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:20.780099: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:20.829966: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:20.831761: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:21.064053: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:21.064825: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:21.085713: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:21.175293: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:21.222275: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:21.223041: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:21.253627: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:21.486371: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:21.491754: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:21.700167: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:21.700814: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:21.711808: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:21.733867: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:21.775788: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:21.776427: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:21.80638: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:21.845498: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:21.846663: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:22.066367: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.066981: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.078695: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.099919: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:22.175231: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.176342: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.202178: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.252915: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:22.255088: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:22.378555: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.37924: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.392285: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.408871: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:22.458515: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.459178: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.474797: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.511226: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:22.51262: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:22.647087: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.647817: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.660507: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.680541: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:22.756917: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.757844: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.780308: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.829057: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:22.83088: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:22.958029: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:22.958741: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:22.97172: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:22.993241: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:23.066977: L-Isomap embed START
> test_pipeop_isomap.R: 2026-03-02 22:04:23.067878: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:23.090404: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:23.137942: embedding
> test_pipeop_isomap.R: 2026-03-02 22:04:23.139504: DONE
> test_pipeop_isomap.R: 2026-03-02 22:04:23.26562: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:23.266068: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:23.273442: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:23.288412: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:23.378645: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:23.379301: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:23.389784: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:23.411627: Classical Scaling
> test_pipeop_isomap.R: 2026-03-02 22:04:23.471079: Isomap START
> test_pipeop_isomap.R: 2026-03-02 22:04:23.471783: constructing knn graph
> test_pipeop_isomap.R: 2026-03-02 22:04:23.48269: calculating geodesic distances
> test_pipeop_isomap.R: 2026-03-02 22:04:23.504897: Classical Scaling
Saving _problems/test_pipeop_nmf-45.R
Saving _problems/test_pipeop_nmf-73.R
Saving _problems/test_pipeop_nmf-93.R
Saving _problems/test_pipeop_nmf-98.R
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
> test_pipeop_task_preproc.R: Training debug_affectcols
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
══ Skipped tests (128) ═════════════════════════════════════════════════════════
• On CRAN (125): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3',
'test_Graph.R:283:3', 'test_PipeOp.R:32:1', 'test_GraphLearner.R:5:3',
'test_GraphLearner.R:221:3', 'test_GraphLearner.R:343:3',
'test_GraphLearner.R:408:3', 'test_GraphLearner.R:571:3',
'test_doublearrow.R:2:1', 'test_gunion.R:2:1',
'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3',
'test_learner_weightedaverage.R:105:3',
'test_learner_weightedaverage.R:152:3', 'test_meta.R:39:3',
'test_dictionary.R:7:3', 'test_mlr_graphs_branching.R:26:3',
'test_mlr_graphs_bagging.R:6:3', 'test_mlr_graphs_robustify.R:5:3',
'test_pipeop_adas.R:8:3', 'test_pipeop_blsmote.R:8:3',
'test_pipeop_branch.R:4:3', 'test_pipeop_chunk.R:4:3',
'test_pipeop_classbalancing.R:7:3', 'test_pipeop_boxcox.R:7:3',
'test_pipeop_classweights.R:10:3', 'test_pipeop_classweightsex.R:9:3',
'test_pipeop_collapsefactors.R:6:3', 'test_pipeop_colapply.R:9:3',
'test_pipeop_copy.R:5:3', 'test_pipeop_colroles.R:6:3',
'test_pipeop_decode.R:14:3', 'test_pipeop_encode.R:21:3',
'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodepl.R:5:3',
'test_pipeop_encodepl.R:72:3', 'test_pipeop_ensemble.R:3:1',
'test_pipeop_encodelmer.R:15:3', 'test_pipeop_encodelmer.R:37:3',
'test_pipeop_encodelmer.R:80:3', 'test_pipeop_filter.R:7:3',
'test_pipeop_fixfactors.R:9:3', 'test_pipeop_histbin.R:7:3',
'test_pipeop_ica.R:7:3', 'test_pipeop_featureunion.R:9:3',
'test_pipeop_featureunion.R:134:3', 'test_pipeop_imputelearner.R:43:3',
'test_pipeop_info.R:3:1', 'test_pipeop_impute.R:4:3',
'test_pipeop_kernelpca.R:9:3', 'test_pipeop_isomap.R:10:3',
'test_pipeop_learner.R:17:3', 'test_pipeop_learnerpicvplus.R:2:1',
'test_pipeop_learnercv.R:3:3', 'test_pipeop_learnercv.R:43:3',
'test_pipeop_learnercv.R:73:3', 'test_pipeop_learnercv.R:92:3',
'test_pipeop_learnercv.R:141:3', 'test_pipeop_learnercv.R:157:3',
'test_pipeop_learnercv.R:203:3', 'test_pipeop_learnercv.R:249:3',
'test_pipeop_learnercv.R:278:3', 'test_pipeop_learnercv.R:332:3',
'test_pipeop_learnercv.R:359:3', 'test_pipeop_learnercv.R:389:3',
'test_pipeop_learnercv.R:399:3', 'test_pipeop_learnercv.R:432:3',
'test_pipeop_learnercv.R:472:3', 'test_pipeop_learnercv.R:481:3',
'test_pipeop_learnercv.R:498:3', 'test_pipeop_learnercv.R:506:3',
'test_pipeop_learnercv.R:530:3', 'test_pipeop_learnercv.R:554:3',
'test_pipeop_learnercv.R:634:3', 'test_pipeop_learnercv.R:654:3',
'test_pipeop_learnercv.R:669:3', 'test_pipeop_learnercv.R:754:3',
'test_pipeop_learnercv.R:799:3', 'test_pipeop_learnercv.R:827:3',
'test_pipeop_modelmatrix.R:7:3', 'test_pipeop_missind.R:6:3',
'test_pipeop_multiplicityexply.R:9:3', 'test_pipeop_mutate.R:9:3',
'test_pipeop_nearmiss.R:7:3', 'test_pipeop_multiplicityimply.R:9:3',
'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3',
'test_pipeop_proxy.R:2:1', 'test_pipeop_quantilebin.R:5:3',
'test_pipeop_randomprojection.R:6:3', 'test_pipeop_randomresponse.R:5:3',
'test_pipeop_removeconstants.R:6:3', 'test_pipeop_renamecolumns.R:6:3',
'test_pipeop_replicate.R:9:3', 'test_pipeop_rowapply.R:6:3',
'test_pipeop_scale.R:6:3', 'test_pipeop_scale.R:10:3',
'test_pipeop_scalemaxabs.R:6:3', 'test_pipeop_scalerange.R:7:3',
'test_pipeop_select.R:9:3', 'test_pipeop_smote.R:10:3',
'test_pipeop_smotenc.R:8:3', 'test_pipeop_spatialsign.R:3:1',
'test_pipeop_splines.R:3:1', 'test_pipeop_nmf.R:6:3',
'test_pipeop_targetinvert.R:4:3', 'test_pipeop_targetmutate.R:5:3',
'test_pipeop_targettrafo.R:4:3', 'test_pipeop_subsample.R:6:3',
'test_pipeop_targettrafoscalerange.R:5:3', 'test_pipeop_task_preproc.R:4:3',
'test_pipeop_task_preproc.R:14:3', 'test_pipeop_tomek.R:7:3',
'test_pipeop_textvectorizer.R:37:3', 'test_pipeop_textvectorizer.R:186:3',
'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3',
'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:7:3',
'test_ppl.R:63:3', 'test_pipeop_tunethreshold.R:111:3',
'test_pipeop_tunethreshold.R:191:3', 'test_typecheck.R:188:3'
• Skipping (1): 'test_GraphLearner.R:1278:3'
• empty test (2): 'test_pipeop_isomap.R:111:1', 'test_pipeop_missind.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pipeop_datefeatures.R:7:3'): PipeOpDateFeatures - basic properties ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:7:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_datefeatures.R:17:3'): PipeOpDateFeatures - finds POSIXct column ──
Error in `seq.Date(as.Date("2020-01-31"), length.out = 150L)`: exactly two of 'to', 'by' and 'length.out' / 'along.with' must be specified
Backtrace:
▆
1. ├─base::seq(as.Date("2020-01-31"), length.out = 150L) at test_pipeop_datefeatures.R:17:3
2. └─base::seq.Date(as.Date("2020-01-31"), length.out = 150L)
── Error ('test_pipeop_nmf.R:45:3'): PipeOpNMF - does not modify search path when NMF is not loaded, fix for #929 ──
Error in `detach(package:generics)`: invalid 'name' argument
Backtrace:
▆
1. └─base::detach(package:generics) at test_pipeop_nmf.R:45:3
── Failure ('test_pipeop_nmf.R:73:3'): PipeOpNMF - does not modify search path when NMF is loaded, fix for #929 ──
Expected `all(...)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test_pipeop_nmf.R:93:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Expected `all(paste0("package:", c("BiocGenerics", "generics")) %in% search())` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test_pipeop_nmf.R:98:3'): PipeOpNMF - does not modify search path when some of NMF's dependencies are loaded, fix for #929 ──
Error in `FUN(X[[i]], ...)`: invalid 'name' argument
This happened in PipeOp nmf's $train()
Backtrace:
▆
1. ├─op$train(list(tsk("iris"))) at test_pipeop_nmf.R:98:3
2. │ └─mlr3pipelines:::.__PipeOp__train(...)
3. │ ├─base::withCallingHandlers(...)
4. │ └─private$.train(input)
5. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train(...)
6. │ └─private$.train_task(intask)
7. │ └─mlr3pipelines:::.__PipeOpTaskPreproc__.train_task(...)
8. │ ├─data.table::as.data.table(...)
9. │ └─private$.train_dt(dt, task$levels(cols), task$truth())
10. │ └─mlr3pipelines:::.__PipeOpNMF__.train_dt(...)
11. │ └─mlr3misc::map(to_be_detached, detach, character.only = TRUE)
12. │ └─base::lapply(.x, .f, ...)
13. │ └─base (local) FUN(X[[i]], ...)
14. │ └─base::stop("invalid 'name' argument")
15. └─base::.handleSimpleError(...)
16. └─mlr3pipelines (local) h(simpleError(msg, call))
[ FAIL 6 | WARN 0 | SKIP 128 | PASS 8754 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64