CRAN Package Check Results for Package micompr

Last updated on 2025-05-31 20:50:40 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	1.1.4	3.35	69.01	72.36	ERROR
r-devel-linux-x86_64-debian-gcc	1.1.4	2.46	48.93	51.39	ERROR
r-devel-linux-x86_64-fedora-clang	1.1.4			110.90	ERROR
r-devel-linux-x86_64-fedora-gcc	1.1.4			124.49	ERROR
r-devel-windows-x86_64	1.1.4	5.00	137.00	142.00	OK
r-patched-linux-x86_64	1.1.4	3.96	82.63	86.59	OK
r-release-linux-x86_64	1.1.4	3.40	64.90	68.30	ERROR
r-release-macos-arm64	1.1.4			64.00	OK
r-release-macos-x86_64	1.1.4			114.00	OK
r-release-windows-x86_64	1.1.4	4.00	139.00	143.00	OK
r-oldrel-macos-arm64	1.1.4			54.00	OK
r-oldrel-macos-x86_64	1.1.4			140.00	OK
r-oldrel-windows-x86_64	1.1.4	6.00	121.00	127.00	ERROR

Check Details

Version: 1.1.4
Check: examples
Result: ERROR Running examples in ‘micompr-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: assumptions.cmpoutput > ### Title: Get assumptions for parametric tests performed on output > ### comparisons > ### Aliases: assumptions.cmpoutput > > ### ** Examples > > > # Create a cmpoutput object from the provided datasets > cmp <- cmpoutput("All", 0.9, pphpc_ok$data[["All"]], pphpc_ok$obs_lvls) > > # Get the assumptions for the parametric tests performed in cmp > acmp <- assumptions(cmp) Error in MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", : unused arguments (mvnTest = "royston", univariateTest = "SW") Calls: assumptions -> assumptions.cmpoutput -> assumptions_manova Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [14s/21s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # Copyright (c) 2016 Nuno Fachada > # Distributed under the MIT License (http://opensource.org/licenses/MIT) > > library(testthat) > > test_check("micompr") Loading required package: micompr [ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5 ── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ── Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─micompr::assumptions_manova(bogus_data, factors) ── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3 2. └─micompr:::assumptions.cmpoutput(cmp) 3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) ── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3 2. └─micompr:::assumptions.micomp(mic1a) 3. └─base::lapply(obj, function(x) assumptions(x)) 4. └─micompr (local) FUN(X[[i]], ...) 5. ├─micompr::assumptions(x) 6. └─micompr:::assumptions.cmpoutput(x) 7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) [ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘paper.Rnw’ using knitr Quitting from paper.Rnw:340-342 [sunspot3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `MVN::mvn()`: ! unused arguments (mvnTest = "royston", univariateTest = "SW") --- Backtrace: x 1. +-micompr::assumptions(cmp) 2. \-micompr:::assumptions.cmpoutput(cmp) 3. \-micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'paper.Rnw' failed with diagnostics: unused arguments (mvnTest = "royston", univariateTest = "SW") --- failed re-building ‘paper.Rnw’ --- re-building ‘tolatex-examples.Rnw’ using knitr --- finished re-building ‘tolatex-examples.Rnw’ SUMMARY: processing the following file failed: ‘paper.Rnw’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [9s/15s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # Copyright (c) 2016 Nuno Fachada > # Distributed under the MIT License (http://opensource.org/licenses/MIT) > > library(testthat) > > test_check("micompr") Loading required package: micompr [ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5 ── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ── Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─micompr::assumptions_manova(bogus_data, factors) ── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3 2. └─micompr:::assumptions.cmpoutput(cmp) 3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) ── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3 2. └─micompr:::assumptions.micomp(mic1a) 3. └─base::lapply(obj, function(x) assumptions(x)) 4. └─micompr (local) FUN(X[[i]], ...) 5. ├─micompr::assumptions(x) 6. └─micompr:::assumptions.cmpoutput(x) 7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) [ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.4
Check: examples
Result: ERROR Running examples in ‘micompr-Ex.R’ failed The error most likely occurred in: > ### Name: assumptions.cmpoutput > ### Title: Get assumptions for parametric tests performed on output > ### comparisons > ### Aliases: assumptions.cmpoutput > > ### ** Examples > > > # Create a cmpoutput object from the provided datasets > cmp <- cmpoutput("All", 0.9, pphpc_ok$data[["All"]], pphpc_ok$obs_lvls) > > # Get the assumptions for the parametric tests performed in cmp > acmp <- assumptions(cmp) Error in MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", : unused arguments (mvnTest = "royston", univariateTest = "SW") Calls: assumptions -> assumptions.cmpoutput -> assumptions_manova Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-oldrel-windows-x86_64

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [22s/31s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # Copyright (c) 2016 Nuno Fachada > # Distributed under the MIT License (http://opensource.org/licenses/MIT) > > library(testthat) > > test_check("micompr") Loading required package: micompr [ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5 ── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ── Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─micompr::assumptions_manova(bogus_data, factors) ── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3 2. └─micompr:::assumptions.cmpoutput(cmp) 3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) ── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3 2. └─micompr:::assumptions.micomp(mic1a) 3. └─base::lapply(obj, function(x) assumptions(x)) 4. └─micompr (local) FUN(X[[i]], ...) 5. ├─micompr::assumptions(x) 6. └─micompr:::assumptions.cmpoutput(x) 7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) [ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘paper.Rnw’ using knitr Quitting from paper.Rnw:340-342 [sunspot3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `MVN::mvn()`: ! unused arguments (mvnTest = "royston", univariateTest = "SW") --- Backtrace: x 1. +-micompr::assumptions(cmp) 2. \-micompr:::assumptions.cmpoutput(cmp) 3. \-micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'paper.Rnw' failed with diagnostics: unused arguments (mvnTest = "royston", univariateTest = "SW") --- failed re-building ‘paper.Rnw’ --- re-building ‘tolatex-examples.Rnw’ using knitr --- finished re-building ‘tolatex-examples.Rnw’ SUMMARY: processing the following file failed: ‘paper.Rnw’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-oldrel-windows-x86_64

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [23s/44s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # Copyright (c) 2016 Nuno Fachada > # Distributed under the MIT License (http://opensource.org/licenses/MIT) > > library(testthat) > > test_check("micompr") Loading required package: micompr [ FAIL 4 | WARN 73 | SKIP 0 | PASS 287 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5 ── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ── Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─micompr::assumptions_manova(bogus_data, factors) ── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3 2. └─micompr:::assumptions.cmpoutput(cmp) 3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) ── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3 2. └─micompr:::assumptions.micomp(mic1a) 3. └─base::lapply(obj, function(x) assumptions(x)) 4. └─micompr (local) FUN(X[[i]], ...) 5. ├─micompr::assumptions(x) 6. └─micompr:::assumptions.cmpoutput(x) 7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) [ FAIL 4 | WARN 73 | SKIP 0 | PASS 287 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [14s/18s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # Copyright (c) 2016 Nuno Fachada > # Distributed under the MIT License (http://opensource.org/licenses/MIT) > > library(testthat) > > test_check("micompr") Loading required package: micompr [ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5 ── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ── Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─micompr::assumptions_manova(bogus_data, factors) ── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3 2. └─micompr:::assumptions.cmpoutput(cmp) 3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) ── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3 2. └─micompr:::assumptions.micomp(mic1a) 3. └─base::lapply(obj, function(x) assumptions(x)) 4. └─micompr (local) FUN(X[[i]], ...) 5. ├─micompr::assumptions(x) 6. └─micompr:::assumptions.cmpoutput(x) 7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) [ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 1.1.4
Check: tests
Result: ERROR Running 'testthat.R' [17s] Running the tests in 'tests/testthat.R' failed. Complete output: > # Copyright (c) 2016 Nuno Fachada > # Distributed under the MIT License (http://opensource.org/licenses/MIT) > > library(testthat) > > test_check("micompr") Loading required package: micompr [ FAIL 4 | WARN 73 | SKIP 0 | PASS 287 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5 ── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ── Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─micompr::assumptions_manova(bogus_data, factors) ── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3 2. └─micompr:::assumptions.cmpoutput(cmp) 3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) ── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ── Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW") Backtrace: ▆ 1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3 2. └─micompr:::assumptions.micomp(mic1a) 3. └─base::lapply(obj, function(x) assumptions(x)) 4. └─micompr (local) FUN(X[[i]], ...) 5. ├─micompr::assumptions(x) 6. └─micompr:::assumptions.cmpoutput(x) 7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls) [ FAIL 4 | WARN 73 | SKIP 0 | PASS 287 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64