Last updated on 2025-09-04 21:49:47 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.63 | 251.90 | 265.53 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.61 | 231.30 | 241.91 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 354.05 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 179.00 | 198.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.82 | 240.60 | 256.42 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.01 | 254.59 | 269.60 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 203.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 237.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.542, system: 0.040, elapsed: 2.819 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.021, system: 0.103, elapsed: 18.293 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.408 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.808, system: 0.188, elapsed: 7.344 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.326 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.268, system: 0.373, elapsed: 30.083 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.508, system: 0.036, elapsed: 2.533 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.998, system: 0.082, elapsed: 12.512 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.741, system: 0.161, elapsed: 6.099 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.127, system: 0.312, elapsed: 22.542 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.031, elapsed: 2.292 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.953, system: 0.064, elapsed: 14.795 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.313 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.745, system: 0.196, elapsed: 6.814 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.277 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.150, system: 0.220, elapsed: 1.227 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.314, system: 0.546, elapsed: 26.728 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.486, system: 0.033, elapsed: 2.416 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.023, system: 0.085, elapsed: 14.396 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.266 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.671, system: 0.170, elapsed: 6.322 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.371 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.310, system: 0.451, elapsed: 19.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.499, system: 0.787, elapsed: 44.200 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/141s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.525, system: 0.044, elapsed: 2.726 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.989, system: 0.100, elapsed: 16.986 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.015, elapsed: 0.424 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.626, system: 0.241, elapsed: 6.998 seconds]
Computing values for grid cells...
... done. [user: 0.154, system: 0.004, elapsed: 0.296 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.022, system: 0.429, elapsed: 28.425 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.048, elapsed: 2.964 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.019, system: 0.150, elapsed: 19.630 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.564 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.655, system: 0.154, elapsed: 10.395 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.006, elapsed: 0.455 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.074, system: 0.397, elapsed: 35.200 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.504, system: 0.026, elapsed: 4.100 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.934, system: 0.069, elapsed: 18.431 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.010, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.511, system: 0.157, elapsed: 5.053 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.012, elapsed: 0.256 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.042, system: 0.245, elapsed: 0.926 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.978, system: 0.548, elapsed: 30.422 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.030, elapsed: 2.290 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.929, system: 0.076, elapsed: 14.618 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.012, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.630, system: 0.181, elapsed: 5.478 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.006, elapsed: 0.225 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.076, system: 0.454, elapsed: 15.529 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.122, system: 0.786, elapsed: 39.512 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64