Last updated on 2025-11-02 23:49:42 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 244.69 | 257.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.68 | 268.38 | 279.06 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 188.00 | 202.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 172.00 | 182.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/142s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.604, system: 0.055, elapsed: 2.029 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.508, system: 0.118, elapsed: 12.439 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.016, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.844, system: 0.214, elapsed: 4.638 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.180 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.886, system: 0.432, elapsed: 20.244 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.035, elapsed: 1.651 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.664, system: 0.205, elapsed: 12.895 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.017, elapsed: 0.358 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.999, system: 0.222, elapsed: 9.812 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.007, elapsed: 0.267 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.187, system: 0.511, elapsed: 25.786 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.762, system: 0.068, elapsed: 2.477 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.865, system: 0.344, elapsed: 14.854 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.018, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.131, system: 0.292, elapsed: 6.443 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.271 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.262, system: 0.257, elapsed: 1.083 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.037, system: 1.024, elapsed: 26.429 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.709, system: 0.082, elapsed: 2.581 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.883, system: 0.295, elapsed: 25.451 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.015, elapsed: 0.498 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.187, system: 0.314, elapsed: 10.735 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.407 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.946, system: 0.526, elapsed: 20.431 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.762, system: 1.279, elapsed: 61.459 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.788, system: 0.074, elapsed: 2.497 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.919, system: 0.292, elapsed: 15.176 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.022, elapsed: 0.351 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.889, system: 0.272, elapsed: 4.904 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.006, elapsed: 0.182 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.517, system: 0.693, elapsed: 23.833 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.702, system: 0.074, elapsed: 2.135 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.935, system: 0.289, elapsed: 14.584 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.017, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.978, system: 0.272, elapsed: 5.665 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.015, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.556, system: 0.713, elapsed: 23.751 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.947, system: 0.107, elapsed: 2.709 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.748, system: 0.355, elapsed: 12.075 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.016, elapsed: 0.235 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.738, system: 0.257, elapsed: 4.743 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.018, elapsed: 0.294 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.131, system: 0.248, elapsed: 1.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.579, system: 1.048, elapsed: 22.314 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.791, system: 0.066, elapsed: 2.845 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.409, system: 0.109, elapsed: 11.316 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.010, elapsed: 0.203 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.715, system: 0.175, elapsed: 6.309 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.004, elapsed: 0.489 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.715, system: 0.489, elapsed: 19.947 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.658, system: 0.887, elapsed: 42.353 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64