Last updated on 2026-01-06 19:50:32 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.04 | 246.46 | 259.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.16 | 230.17 | 241.33 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 193.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.71 | 269.87 | 284.58 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.05 | 254.30 | 269.35 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 187.00 | 197.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 350.00 | 360.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 248.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [127s/144s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.672, system: 0.051, elapsed: 2.560 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.489, system: 0.132, elapsed: 12.028 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.258, system: 0.022, elapsed: 0.288 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.919, system: 0.871, elapsed: 10.805 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.005, elapsed: 0.211 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.100, system: 1.109, elapsed: 26.598 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.577, system: 0.040, elapsed: 1.581 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.538, system: 0.112, elapsed: 12.177 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.019, elapsed: 1.829 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.474, system: 0.748, elapsed: 44.447 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.004, elapsed: 0.196 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.565, system: 0.954, elapsed: 61.131 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.567, system: 0.031, elapsed: 1.774 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.759, system: 0.125, elapsed: 12.236 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.236, system: 0.018, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.970, system: 0.859, elapsed: 8.428 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.005, elapsed: 0.167 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.216, system: 0.226, elapsed: 0.856 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.764, system: 1.318, elapsed: 24.550 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.727, system: 0.046, elapsed: 1.455 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.676, system: 0.036, elapsed: 8.538 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.499, system: 0.022, elapsed: 0.184 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 11.885, system: 0.812, elapsed: 4.335 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.006, elapsed: 0.174 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 29.286, system: 1.091, elapsed: 10.515 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 53.537, system: 2.057, elapsed: 25.827 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/229s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.586, system: 0.039, elapsed: 4.737 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.566, system: 0.054, elapsed: 27.067 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.016, elapsed: 0.594 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.236, system: 0.435, elapsed: 12.966 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.439 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.326, system: 0.572, elapsed: 47.529 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.032, elapsed: 4.464 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.558, system: 0.057, elapsed: 26.284 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.014, elapsed: 0.612 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.281, system: 0.423, elapsed: 13.269 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.433 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.376, system: 0.549, elapsed: 46.566 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.035, elapsed: 4.309 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.600, system: 0.068, elapsed: 25.730 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.602 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.292, system: 0.407, elapsed: 11.870 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.458 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.164, system: 0.310, elapsed: 1.857 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.703, system: 0.863, elapsed: 46.602 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.033, elapsed: 4.251 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.488, system: 0.064, elapsed: 25.490 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.542 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.232, system: 0.414, elapsed: 12.254 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.435 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.817, system: 0.562, elapsed: 28.983 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.130, system: 1.114, elapsed: 73.638 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64