Last updated on 2025-07-22 21:51:05 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 244.35 | 257.79 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.13 | 259.77 | 270.90 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 178.00 | 198.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 164.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 185.00 | 204.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 152.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 22.00 | 236.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.052, elapsed: 2.233 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.032, system: 0.094, elapsed: 11.967 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.257 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.743, system: 0.183, elapsed: 5.412 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.234 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.214, system: 0.370, elapsed: 20.886 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.425, system: 0.027, elapsed: 1.890 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.968, system: 0.064, elapsed: 15.216 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.374 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.721, system: 0.166, elapsed: 6.823 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.995, system: 0.292, elapsed: 25.328 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.497, system: 0.031, elapsed: 2.209 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.000, system: 0.063, elapsed: 14.933 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.354 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.543, system: 0.178, elapsed: 4.371 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.191 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.124, system: 0.208, elapsed: 0.981 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.116, system: 0.520, elapsed: 23.957 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.420, system: 0.028, elapsed: 2.012 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.989, system: 0.049, elapsed: 12.891 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.560, system: 0.153, elapsed: 5.402 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.219 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.087, system: 0.425, elapsed: 14.316 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.043, system: 0.699, elapsed: 36.067 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/103s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.513, system: 0.040, elapsed: 1.705 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.796, system: 0.061, elapsed: 10.536 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.307 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.465, system: 0.179, elapsed: 4.454 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.004, elapsed: 0.212 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.640, system: 0.314, elapsed: 17.859 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.471, system: 0.029, elapsed: 1.985 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.993, system: 0.065, elapsed: 14.498 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.012, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.487, system: 0.157, elapsed: 5.020 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.221 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.829, system: 0.292, elapsed: 22.736 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.515, system: 0.027, elapsed: 2.014 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.902, system: 0.065, elapsed: 13.674 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.012, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.445, system: 0.163, elapsed: 4.754 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.174 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.037, system: 0.201, elapsed: 0.790 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.853, system: 0.508, elapsed: 22.544 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.436, system: 0.033, elapsed: 1.598 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.846, system: 0.055, elapsed: 11.732 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.242 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.504, system: 0.163, elapsed: 4.757 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.002, elapsed: 0.197 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.951, system: 0.438, elapsed: 14.982 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.698, system: 0.730, elapsed: 34.268 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64