Last updated on 2026-07-04 21:52:23 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.10.0 | 5.83 | 140.59 | 146.42 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.10.0 | 4.35 | 99.41 | 103.76 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.10.0 | 11.00 | 391.49 | 402.49 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.10.0 | 11.00 | 412.29 | 423.29 | OK | |
| r-devel-windows-x86_64 | 2.10.0 | 9.00 | 166.00 | 175.00 | OK | |
| r-patched-linux-x86_64 | 2.10.0 | 8.08 | 134.21 | 142.29 | OK | |
| r-release-linux-x86_64 | 2.10.0 | OK | ||||
| r-release-macos-arm64 | 2.10.0 | 2.00 | 33.00 | 35.00 | OK | |
| r-release-macos-x86_64 | 2.10.0 | 5.00 | 165.00 | 170.00 | OK | |
| r-release-windows-x86_64 | 2.10.0 | 10.00 | 149.00 | 159.00 | OK | |
| r-oldrel-macos-arm64 | 2.10.0 | 2.00 | 37.00 | 39.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.10.0 | 5.00 | 133.00 | 138.00 | OK | |
| r-oldrel-windows-x86_64 | 2.10.0 | 13.00 | 177.00 | 190.00 | OK |
Version: 2.10.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(loo)
This is loo version 2.10.0
- Online documentation and vignettes at mc-stan.org/loo
- As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.
> library(testthat)
Attaching package: 'testthat'
The following object is masked from 'package:loo':
compare
> Sys.setenv("R_TESTS" = "")
> test_check("loo")
Starting 2 test processes.
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2:
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: -theta %o% xFUN(X[[i]], ...)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 3: 7: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: lapply(X = S, FUN = FUN, ...) 6:
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: FUN(X[[i]], ...)tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 7: 10: lapply(X = S, FUN = FUN, ...)tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 8: 11: doTryCatch(return(expr), name, parentenv, handler)tryCatch(expr, error = function(e) {
> test_loo_and_waic.R: call <- conditionCall(e) 9: if (!is.null(call)) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) 11: prefix <- paste0(prefix, "\n ")tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } call <- sys.call(-4L) invisible(structure(msg, class = "try-error", condition = e)) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]}) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")
> test_loo_and_waic.R: if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) 12: prefix <- paste0(prefix, "\n ")try(lapply(X = S, FUN = FUN, ...), silent = TRUE) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))
> test_loo_and_waic.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) }FUN(X[[i]], ...)
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)16:
> test_loo_and_waic.R: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: 13: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: FUN(X[[i]], ...)
> test_loo_and_waic.R: method = method)
> test_loo_and_waic.R: 18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)15:
> test_loo_and_waic.R: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, 19: i], tail_len_i = tail_len[i]))loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 20: loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_and_waic.R: 21: 18: withCallingHandlers(expr, warning = function(w) if (inherits(w, importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, classes)) tryInvokeRestart("muffleWarning")) method = is_method)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 22: 19: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 23: 20: eval(code, test_env)loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 21: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning"))
> test_loo_and_waic.R:
> test_loo_and_waic.R: 24: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({22: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: 23: eval(code, test_env) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations24: if (snapshot_skipped) {eval(code, test_env) skip("On CRAN")
> test_loo_and_waic.R: }25: else if (!new_expectations && skip_on_empty) {withCallingHandlers({ skip_empty() eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, expectation = handle_expectation, packageNotFoundError = function(e) { if (snapshot_skipped) { if (on_cran()) { skip("On CRAN") skip(paste0("{", e$package, "} is not installed.")) } } else if (!new_expectations && skip_on_empty) {}, snapshot_on_cran = function(cnd) { skip_empty() snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot")}, expectation = handle_expectation, packageNotFoundError = function(e) {}, skip = handle_skip, warning = handle_warning, message = handle_message, if (on_cran()) { error = handle_error, interrupt = handle_interrupt) skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")26: }, skip = handle_skip, warning = handle_warning, message = handle_message, doTryCatch(return(expr), name, parentenv, handler) error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28:
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29:
> test_loo_and_waic.R: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29: tryCatch(withCallingHandlers({ eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations31: if (snapshot_skipped) {withOneRestart(expr, restarts[[1L]]) skip("On CRAN")
> test_loo_and_waic.R: }32: else if (!new_expectations && skip_on_empty) {withRestarts(tryCatch(withCallingHandlers({ skip_empty() eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { skip_empty() snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot")}, expectation = handle_expectation, packageNotFoundError = function(e) {}, skip = handle_skip, warning = handle_warning, message = handle_message, if (on_cran()) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal) skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }30: }, snapshot_on_cran = function(cnd) {doWithOneRestart(return(expr), restart) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() {
> test_loo_and_waic.R: })31:
> test_loo_and_waic.R: withOneRestart(expr, restarts[[1L]])33:
> test_loo_and_waic.R: test_code(code, parent.frame())32:
> test_loo_and_waic.R: withRestarts(tryCatch(withCallingHandlers({34: eval(code, test_env)test_that("loo with cores=1 and cores=2 gives same results", { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { expect_equal(loo1$estimates, loo2$estimates) skip_empty() })
> test_loo_and_waic.R: 35: eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: 37: }withCallingHandlers({}, expectation = handle_expectation, packageNotFoundError = function(e) { eval(code, test_env) if (on_cran()) { new_expectations <- the$test_expectations > starting_expectations skip(paste0("{", e$package, "} is not installed.")) if (snapshot_skipped) { } skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, snapshot_on_cran = function(cnd) {}, expectation = handle_expectation, packageNotFoundError = function(e) { snapshot_skipped <<- TRUE if (on_cran()) { invokeRestart("muffle_cran_snapshot") skip(paste0("{", e$package, "} is not installed."))}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal), }, snapshot_on_cran = function(cnd) { end_test = function() { snapshot_skipped <<- TRUE }) invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38:
> test_loo_and_waic.R: doTryCatch(return(expr), name, parentenv, handler)33:
> test_loo_and_waic.R: test_code(code, parent.frame())39:
> test_loo_and_waic.R: tryCatchOne(expr, names, parentenv, handlers[[1L]])34:
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: test_that("loo with cores=1 and cores=2 gives same results", tryCatch(withCallingHandlers({ { eval(code, test_env) loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, new_expectations <- the$test_expectations > starting_expectations cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35: if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()eval(code, test_env) }
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: 37: }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: withCallingHandlers({43: eval(code, test_env)withOneRestart(expr, restarts[[1L]]) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {
> test_loo_and_waic.R: skip_empty()44: }withRestarts(tryCatch(withCallingHandlers({}, expectation = handle_expectation, packageNotFoundError = function(e) { eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE else if (!new_expectations && skip_on_empty) { invokeRestart("muffle_cran_snapshot") skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: }45: }, expectation = handle_expectation, packageNotFoundError = function(e) {test_code(code = exprs, env = env, reporter = get_reporter() %||% if (on_cran()) { StopReporter$new()) skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }46: }, snapshot_on_cran = function(cnd) {source_file(path, env = env(env), desc = desc, shuffle = shuffle, snapshot_skipped <<- TRUE error_call = error_call) invokeRestart("muffle_cran_snapshot")
> test_loo_and_waic.R: }, skip = handle_skip, warning = handle_warning, message = handle_message, 47: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 42: 48: doWithOneRestart(return(expr), restart)doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 43: 49: withOneRestart(expr, restarts[[1L]])tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: 44: tryCatch(code, testthat_abort_reporter = function(cnd) {withRestarts(tryCatch(withCallingHandlers({ cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: eval(code, test_env)with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53:
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R: 54: (function (path, shuffle) }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }{}, snapshot_on_cran = function(cnd) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() {{ if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) }) .Internal(do.call(what, args, envir))
> test_loo_and_waic.R: })(base::quote(function (path, shuffle) 45: {test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: error_call = error_call)56:
> test_loo_and_waic.R: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311134df0de"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 47: 57: test_one_file(path, env = the$testing_env, shuffle = shuffle)base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311134df0de"),
> test_loo_and_waic.R: base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, 48: quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", doTryCatch(return(expr), name, parentenv, handler) compress = FALSE)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 49: 58: tryCatchOne(expr, names, parentenv, handlers[[1L]])base::withCallingHandlers({
> test_loo_and_waic.R: { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311134df0de"), 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, NULL quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", }) compress = FALSE)
> test_loo_and_waic.R: base::flush(base::stdout())52: base::flush(base::stderr())with_reporter(multi, test_one_file(path, env = the$testing_env, { shuffle = shuffle)) NULL
> test_loo_and_waic.R: NULL53: }asNamespace("testthat")$queue_task(path, shuffle) base::invisible()
> test_loo_and_waic.R: }, error = function(e) {54: {(function (path, shuffle) callr_data <- base::as.environment("tools:callr")$`__callr_data__`{ err <- callr_data$err asNamespace("testthat")$queue_task(path, shuffle) if (FALSE) {})(base::quote("test_loo_and_waic.R"), base::quote(FALSE)) base::assign(".Traceback", base::.traceback(4), envir = callr_data)
> test_loo_and_waic.R: utils::dump.frames("__callr_dump__")55: base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, (function (what, args, quote = FALSE, envir = parent.frame()) envir = callr_data){ base::rm("__callr_dump__", envir = .GlobalEnv) if (!is.list(args)) } stop("second argument must be a list") e <- err$process_call(e) if (quote) e2 <- err$new_error("error in callr subprocess") args <- lapply(args, enquote) class <- base::class .Internal(do.call(what, args, envir)) class(e2) <- base::c("callr_remote_error", class(e2))})(base::quote(function (path, shuffle) e2 <- err$add_trace_back(e2){ cut <- base::which(e2$trace$scope == "global")[1] asNamespace("testthat")$queue_task(path, shuffle) if (!base::is.na(cut)) {}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), e2$trace <- e2$trace[-(1:cut), ] quote = base::quote(TRUE)) }
> test_loo_and_waic.R: if (callr_data$has_otel) {56: callr_data$otel_span$record_exception(e2)base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311134df0de"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: }base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311134df0de"), base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, ".error")) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", } compress = FALSE)}, interrupt = function(e) {
> test_loo_and_waic.R: {58: callr_data <- base::as.environment("tools:callr")$`__callr_data__`base::withCallingHandlers({ err <- callr_data$err { if (FALSE) { NULL base::assign(".Traceback", base::.traceback(4), envir = callr_data) NULL utils::dump.frames("__callr_dump__") } base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311134df0de"), envir = callr_data) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, base::rm("__callr_dump__", envir = .GlobalEnv) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", } compress = FALSE) e <- err$process_call(e) base::flush(base::stdout()) e2 <- err$new_error("error in callr subprocess") base::flush(base::stderr()) class <- base::class { class(e2) <- base::c("callr_remote_error", class(e2)) NULL e2 <- err$add_trace_back(e2) NULL cut <- base::which(e2$trace$scope == "global")[1] } if (!base::is.na(cut)) { base::invisible() e2$trace <- e2$trace[-(1:cut), ]}, error = function(e) { } { if (callr_data$has_otel) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` callr_data$otel_span$record_exception(e2) err <- callr_data$err } if (FALSE) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", base::assign(".Traceback", base::.traceback(4), envir = callr_data) ".error")) utils::dump.frames("__callr_dump__") } base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, }, callr_message = function(e) { envir = callr_data) base::try({ base::rm("__callr_dump__", envir = .GlobalEnv) callr_data <- base::as.environment("tools:callr")$`__callr_data__` } pxlib <- callr_data$pxlib e <- err$process_call(e) if (base::is.null(e$code)) { e2 <- err$new_error("error in callr subprocess") e$code <- "301" class <- base::class } class(e2) <- base::c("callr_remote_error", class(e2)) msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, e2 <- err$add_trace_back(e2) NULL))) cut <- base::which(e2$trace$scope == "global")[1] data <- base::paste0(e$code, " ", base::nchar(msg), "\n", if (!base::is.na(cut)) { msg) e2$trace <- e2$trace[-(1:cut), ] if (callr_data$has_otel) { } callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) {
> test_loo_and_waic.R: base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_and_waic.R: 59: if (callr_data$has_otel) {doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: callr_data$otel_span$record_exception(e2)tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) }
> test_loo_and_waic.R: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", 62: ".error"))doTryCatch(return(expr), name, parentenv, handler) }
> test_loo_and_waic.R: }, interrupt = function(e) {63: {tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), callr_data <- base::as.environment("tools:callr")$`__callr_data__` names[nh], parentenv, handlers[[nh]]) err <- callr_data$err
> test_loo_and_waic.R: if (FALSE) {64: base::assign(".Traceback", base::.traceback(4), envir = callr_data)tryCatchList(expr, classes, parentenv, handlers) utils::dump.frames("__callr_dump__")
> test_loo_and_waic.R: base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, 65: envir = callr_data)base::tryCatch(base::withCallingHandlers({ base::rm("__callr_dump__", envir = .GlobalEnv) { } NULL e <- err$process_call(e) NULL e2 <- err$new_error("error in callr subprocess") } class <- base::class base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311134df0de"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", compress = FALSE) base::flush(base::stdout()) class(e2) <- base::c("callr_remote_error", class(e2)) base::flush(base::stderr()) e2 <- err$add_trace_back(e2) { cut <- base::which(e2$trace$scope == "global")[1] NULL if (!base::is.na(cut)) { NULL e2$trace <- e2$trace[-(1:cut), ] } } base::invisible() if (callr_data$has_otel) {}, error = function(e) { callr_data$otel_span$record_exception(e2) { } callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", err <- callr_data$err ".error")) if (FALSE) { } base::assign(".Traceback", base::.traceback(4), envir = callr_data)}, callr_message = function(e) { utils::dump.frames("__callr_dump__") base::try({ base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, callr_data <- base::as.environment("tools:callr")$`__callr_data__` envir = callr_data) pxlib <- callr_data$pxlib base::rm("__callr_dump__", envir = .GlobalEnv) if (base::is.null(e$code)) { } e$code <- "301" e <- err$process_call(e) } e2 <- err$new_error("error in callr subprocess") msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, class <- base::class NULL))) class(e2) <- base::c("callr_remote_error", class(e2)) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", e2 <- err$add_trace_back(e2) msg) cut <- base::which(e2$trace$scope == "global")[1] if (callr_data$has_otel) { if (!base::is.na(cut)) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } }) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", ".error")) }}, interrupt = function(e) { {})
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__")60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e)
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1]tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), if (!base::is.na(cut)) { names[nh], parentenv, handlers[[nh]]) e2$trace <- e2$trace[-(1:cut), ]
> test_loo_and_waic.R: }64: if (callr_data$has_otel) {tryCatchList(expr, classes, parentenv, handlers) callr_data$otel_span$record_exception(e2)
> test_loo_and_waic.R: }65: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", base::tryCatch(base::withCallingHandlers({ ".error")) { } NULL}, callr_message = function(e) { NULL base::try({ } callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311134df0de"), pxlib <- callr_data$pxlib base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, if (base::is.null(e$code)) { quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", e$code <- "301" compress = FALSE) } base::flush(base::stdout()) msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, base::flush(base::stderr()) NULL))) { data <- base::paste0(e$code, " ", base::nchar(msg), "\n", NULL msg) NULL if (callr_data$has_otel) { } callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } base::invisible() })}, error = function(e) {}), error = function(e) { { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` NULL err <- callr_data$err NULL if (FALSE) { } base::assign(".Traceback", base::.traceback(4), envir = callr_data) if (FALSE) { utils::dump.frames("__callr_dump__") base::try(base::stop(e)) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, } envir = callr_data) if (FALSE) { base::rm("__callr_dump__", envir = .GlobalEnv) base::q(save = "no", status = 1) } } e <- err$process_call(e) base::invisible() e2 <- err$new_error("error in callr subprocess")}, interrupt = function(e) { class <- base::class { class(e2) <- base::c("callr_remote_error", class(e2))
> test_loo_and_waic.R: NULL NULL } if (FALSE) { e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] base::q(save = "no", status = 1) if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] base::invisible() } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", ".error")) }}, interrupt = function(e) {}) {
> test_loo_and_waic.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__`An irrecoverable exception occurred. R is aborting now ...
> test_loo_and_waic.R: err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-13311620088b8", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_and_waic-30.R
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 9: 1: tryCatchOne(expr, names, parentenv, handlers[[1L]])outer(X, Y)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) 3: if (!is.null(call)) {posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE) if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w))
> test_loo_predictive_metric.R: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...) 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis")
> test_loo_predictive_metric.R: 19: psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 20: psis(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 21: eval(code, test_env)
> test_loo_predictive_metric.R: 22:
> test_loo_predictive_metric.R: eval(code, test_env)
> test_loo_predictive_metric.R: 23: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e)}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({ eval(code, test_env) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29:
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis") skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }
> test_loo_predictive_metric.R: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 19: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: psis.matrix(-LL, r_eff = r_eff, cores = 2)31:
> test_loo_predictive_metric.R: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_predictive_metric.R: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 20: 33: psis(-LL, r_eff = r_eff, cores = 2)test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 21: eval(code, test_env)
> test_loo_predictive_metric.R: 22: eval(code, test_env)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 23: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36: if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n")}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler) NULL})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_predictive_metric.R: 39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 40: (function (path, shuffle) {25: asNamespace("testthat")$queue_task(path, shuffle)tryCatchOne(expr, names, parentenv, handlers[[1L]])})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) eval(code, test_env) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311656f4ec6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE) }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
> test_loo_predictive_metric.R: 43: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311656f4ec6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", compress = FALSE)
> test_loo_predictive_metric.R: 44: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311656f4ec6"),
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { eval(code, test_env) NULL NULL } base::invisible() new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) {
> test_loo_predictive_metric.R: base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess")}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new()) e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) }
> test_loo_predictive_metric.R: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 33: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__`test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_predictive_metric.R: 39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) { err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_predictive_metric.R", FALSE)), e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311656f4ec6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", ".error")) }}, callr_message = function(e) { base::try({ quote = TRUE)
> test_loo_predictive_metric.R: 43: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311656f4ec6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, callr_data <- base::as.environment("tools:callr")$`__callr_data__` quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", pxlib <- callr_data$pxlib compress = FALSE) if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n",
> test_loo_predictive_metric.R: 44: base::withCallingHandlers({ { NULL NULL msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { } base::invokeRestart("cli_message_handled") base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311656f4ec6"), } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, }) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", })
> test_loo_predictive_metric.R: 45: doTryCatch(return(expr), name, parentenv, handler) compress = FALSE)
> test_loo_predictive_metric.R: 46: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()47: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: }, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data)49: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_predictive_metric.R: 50: tryCatchList(expr, classes, parentenv, handlers) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e)
> test_loo_predictive_metric.R: 51: base::tryCatch(base::withCallingHandlers({ { NULL NULL e2 <- err$new_error("error in callr subprocess") } class <- base::class base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311656f4ec6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", ".error")) } } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`,
> test_loo_predictive_metric.R: envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` e <- err$process_call(e) err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", ".error")) } } pxlib$write_fd(3L, data)}, callr_message = function(e) { if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { })})
> test_loo_predictive_metric.R: 45: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 46: callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code))tryCatchOne(expr, names, parentenv, handlers[[1L]]) }
> test_loo_predictive_metric.R: 47: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R: pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage")48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 49: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_predictive_metric.R: } })}), error = function(e) { { NULL NULL50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 51: base::tryCatch(base::withCallingHandlers({ { NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmp639Y3B/callr-fun-13311656f4ec6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", } base::invisible()}, interrupt = function(e) { { NULL NULL compress = FALSE) } base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible() if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: }, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data)An irrecoverable exception occurred. R is aborting now ...
> test_loo_predictive_metric.R: utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmp639Y3B/callr-rs-result-133116e9cdd30", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e,
> test_loo_predictive_metric.R: NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_predictive_metric-4.R
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test_loo_subsampling_cases.R:4:3',
'test_loo_subsampling_cases.R:256:3', 'test_E_loo.R:134:1',
'test_E_loo.R:142:1', 'test_compare.R:91:1', 'test_compare.R:122:1',
'test_compare.R:160:1', 'test_crps.R:27:1',
'test_deprecated_extractors.R:8:1', 'test_deprecated_extractors.R:106:1',
'test_gpdfit.R:1:1', 'test_kfold_helpers.R:139:1',
'test_loo_and_waic.R:23:1', 'test_loo_moment_matching.R:157:1',
'test_loo_moment_matching.R:247:1', 'test_loo_moment_matching.R:365:1',
'test_model_weighting.R:69:1', 'test_print_plot.R:41:1',
'test_print_plot.R:45:1', 'test_print_plot.R:151:1',
'test_print_plot.R:169:1', 'test_print_plot.R:175:1',
'test_print_plot.R:181:1', 'test_psis.R:13:1', 'test_psis.R:39:1',
'test_psislw.R:15:1', 'test_relative_eff.R:7:1', 'test_relative_eff.R:43:3',
'test_loo_subsampling.R:896:3', 'test_loo_subsampling.R:1077:3',
'test_tisis.R:76:1', 'test_tisis.R:213:1'
• Sys.info()[["sysname"]] == "Darwin" && R.version$arch == "aarch64" is TRUE
(2): 'test_loo_moment_matching.R:468:3', 'test_psis.R:157:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loo_and_waic.R:30:3'): loo with cores=1 and cores=2 gives same results ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─base::suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) at test_loo_and_waic.R:30:3
2. │ └─base::withCallingHandlers(...)
3. ├─loo::loo(LLarr, r_eff = r_eff_arr, cores = 2)
4. └─loo::loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
5. └─loo:::importance_sampling.array(...)
6. └─loo:::do_importance_sampling(...)
7. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
8. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
── Error ('test_loo_predictive_metric.R:4:1'): (code run outside of `test_that()`) ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─loo::psis(-LL, r_eff = r_eff, cores = 2) at test_loo_predictive_metric.R:4:1
2. └─loo:::psis.matrix(-LL, r_eff = r_eff, cores = 2)
3. └─loo:::importance_sampling.matrix(...)
4. └─loo:::do_importance_sampling(...)
5. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
6. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64