Last updated on 2025-09-04 21:49:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.5 | 10.23 | 101.05 | 111.28 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.1.5 | 7.43 | 69.81 | 77.24 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.5 | 178.25 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.5 | 178.65 | OK | |||
| r-devel-windows-x86_64 | 0.1.5 | 12.00 | 106.00 | 118.00 | OK | |
| r-patched-linux-x86_64 | 0.1.5 | 11.86 | 95.00 | 106.86 | OK | |
| r-release-linux-x86_64 | 0.1.5 | 9.23 | 94.98 | 104.21 | OK | |
| r-release-macos-arm64 | 0.1.5 | 54.00 | OK | |||
| r-release-macos-x86_64 | 0.1.5 | 98.00 | OK | |||
| r-release-windows-x86_64 | 0.1.5 | 12.00 | 110.00 | 122.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.5 | 59.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.1.5 | 97.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.5 | 17.00 | 133.00 | 150.00 | OK |
Version: 0.1.5
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Rodney Edmondson <rodney.edmondson@gmail.com>’
Found the following URLs which should use \doi (with the DOI name only):
File ‘agriTutorial.Rd’:
http://dx.doi.org/10.1111/jac.12267
File ‘example1.Rd’:
http://dx.doi.org/10.1111/jac.12267
File ‘example2.Rd’:
http://dx.doi.org/10.1111/jac.12267
File ‘example3.Rd’:
http://dx.doi.org/10.1111/jac.12267
File ‘example4.Rd’:
http://dx.doi.org/10.1111/jac.12267
File ‘example5.Rd’:
http://dx.doi.org/10.1111/jac.12267
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.5
Check: examples
Result: ERROR
Running examples in ‘agriTutorial-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: example4
> ### Title: Example 4: One qualitative treatment factor with repeated
> ### measurements over time.
> ### Aliases: example4
>
> ### ** Examples
>
>
> ## *************************************************************************************
> ## How to run the code
> ## *************************************************************************************
>
> ## Either type example("example4") to run ALL the examples succesively
> ## or copy and paste examples sucessively, as required
>
> ## *************************************************************************************
> ## Options and required packages
> ## *************************************************************************************
>
> options(contrasts = c('contr.treatment','contr.poly'))
> require(nlme)
Loading required package: nlme
>
> ## *************************************************************************************
> ## Section 1: Polynomials for weeks and blocks contrasts
> ## *************************************************************************************
>
> sorghum$rawWeeks = poly(sorghum$varweek, degree = 4, raw = TRUE)
> sorghum$polWeeks = poly(sorghum$varweek, degree = 4, raw = FALSE)
> sorghum$polBlocks = poly(sorghum$varblock, degree = 4, raw = FALSE)
> sorghum$factblock = factor(sorghum$varblock)
>
> ## *************************************************************************************
> ## Section 2: Various correlation models assuming full factorial blocks and weeks model
> ## *************************************************************************************
>
> AIC = NULL
> logLik = NULL
> Model = c("ID", "CS", "AR(1)", "AR(1) + nugget", "UN")
>
> ## independent uncorrelated random plots
> full_indy = gls(y ~ factweek * (Replicate + variety), sorghum)
> anova(full_indy)
Denom. DF: 60
numDF F-value p-value
(Intercept) 1 80947.08 <.0001
factweek 4 220.90 <.0001
Replicate 4 358.86 <.0001
variety 3 334.87 <.0001
factweek:Replicate 16 1.82 0.0495
factweek:variety 12 4.48 <.0001
> AIC = c(AIC, AIC(full_indy))
Error in ll(object) : could not find function "ll"
Calls: AIC -> AIC.default
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc