Last updated on 2023-10-03 22:03:21 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0-18 | 35.81 | 376.53 | 412.34 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0-18 | 27.52 | 283.21 | 310.73 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0-18 | 515.47 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0-18 | 534.03 | ERROR | |||
| r-devel-windows-x86_64 | 1.0-18 | 29.00 | 313.00 | 342.00 | OK | |
| r-patched-linux-x86_64 | 1.0-18 | 37.53 | 373.98 | 411.51 | OK | |
| r-release-linux-x86_64 | 1.0-18 | 36.35 | 379.92 | 416.27 | OK | |
| r-release-macos-arm64 | 1.0-18 | 143.00 | NOTE | |||
| r-release-macos-x86_64 | 1.0-18 | 248.00 | NOTE | |||
| r-release-windows-x86_64 | 1.0-18 | 42.00 | 399.00 | 441.00 | OK | |
| r-oldrel-macos-arm64 | 1.0-18 | 137.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.0-18 | 181.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0-18 | 39.00 | 448.00 | 487.00 | OK |
Version: 1.0-18
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘Guerry’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0-18
Check: tests
Result: ERROR
Running ‘add.R’ [21s/25s]
Running ‘ade4-functions.R’ [30s/35s]
Running ‘adegraphics.R’ [7s/8s]
Running ‘nbgraph.R’ [5s/5s]
Running ‘panelSpatial.R’ [5s/6s]
Running ‘parameter.R’ [6s/7s]
Running ‘s.arrow.R’ [3s/4s]
Running ‘s.class.R’ [3s/5s]
Running ‘s.corcircle.R’ [2s/3s]
Running ‘s.density.R’ [6s/6s]
Running ‘s.distri.R’ [4s/5s]
Running ‘s.image.R’ [6s/8s]
Running ‘s.label.R’ [3s/3s]
Running ‘s.logo.R’ [2s/3s]
Running ‘s.match.R’ [2s/3s]
Running ‘s.traject.R’ [2s/3s]
Running ‘s.value.R’ [5s/6s]
Running ‘s1d.barchart.R’ [3s/4s]
Running ‘s1d.boxplot.R’ [4s/5s]
Running ‘s1d.class.R’ [3s/3s]
Running ‘s1d.density.R’ [4s/4s]
Running ‘s1d.distri.R’ [3s/4s]
Running ‘s1d.gauss.R’ [4s/4s]
Running ‘s1d.hist.R’ [13s/15s]
Running ‘s1d.label.R’ [2s/3s]
Running ‘s1d.match.R’ [2s/2s]
Running ‘table.image.R’ [2s/3s]
Running ‘table.value.R’ [5s/6s]
Running ‘triangle.R’ [6s/7s]
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
The legacy packages maptools, rgdal, and rgeos, underpinning the sp package,
which was just loaded, were retired in October 2023.
Please refer to R-spatial evolution reports for details, especially
https://r-spatial.org/r/2023/05/15/evolution4.html.
It may be desirable to make the sf package available;
package maintainers should consider adding sf to Suggests:.
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0-18
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘adegraphics.Rmd’ using rmarkdown
Quitting from lines 1145-1155 [plot37] (adegraphics.Rmd)
Error: processing vignette 'adegraphics.Rmd' failed with diagnostics:
there is no package called 'Guerry'
--- failed re-building ‘adegraphics.Rmd’
SUMMARY: processing the following file failed:
‘adegraphics.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.0-18
Check: tests
Result: ERROR
Running ‘add.R’ [16s/27s]
Running ‘ade4-functions.R’ [23s/37s]
Running ‘adegraphics.R’ [5s/9s]
Running ‘nbgraph.R’ [4s/6s]
Running ‘panelSpatial.R’ [3s/6s]
Running ‘parameter.R’ [5s/7s]
Running ‘s.arrow.R’ [2s/3s]
Running ‘s.class.R’ [2s/4s]
Running ‘s.corcircle.R’ [2s/3s]
Running ‘s.density.R’ [4s/8s]
Running ‘s.distri.R’ [3s/5s]
Running ‘s.image.R’ [4s/8s]
Running ‘s.label.R’ [2s/4s]
Running ‘s.logo.R’ [2s/3s]
Running ‘s.match.R’ [2s/3s]
Running ‘s.traject.R’ [2s/3s]
Running ‘s.value.R’ [4s/7s]
Running ‘s1d.barchart.R’ [3s/6s]
Running ‘s1d.boxplot.R’ [3s/6s]
Running ‘s1d.class.R’ [2s/4s]
Running ‘s1d.density.R’ [3s/4s]
Running ‘s1d.distri.R’ [3s/5s]
Running ‘s1d.gauss.R’ [3s/5s]
Running ‘s1d.hist.R’ [9s/15s]
Running ‘s1d.label.R’ [2s/2s]
Running ‘s1d.match.R’ [2s/3s]
Running ‘table.image.R’ [2s/3s]
Running ‘table.value.R’ [4s/7s]
Running ‘triangle.R’ [4s/6s]
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
The legacy packages maptools, rgdal, and rgeos, underpinning the sp package,
which was just loaded, were retired in October 2023.
Please refer to R-spatial evolution reports for details, especially
https://r-spatial.org/r/2023/05/15/evolution4.html.
It may be desirable to make the sf package available;
package maintainers should consider adding sf to Suggests:.
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0-18
Check: tests
Result: ERROR
Running ‘add.R’ [25s/28s]
Running ‘ade4-functions.R’ [36s/37s]
Running ‘adegraphics.R’
Running ‘nbgraph.R’
Running ‘panelSpatial.R’
Running ‘parameter.R’
Running ‘s.arrow.R’
Running ‘s.class.R’
Running ‘s.corcircle.R’
Running ‘s.density.R’
Running ‘s.distri.R’
Running ‘s.image.R’
Running ‘s.label.R’
Running ‘s.logo.R’
Running ‘s.match.R’
Running ‘s.traject.R’
Running ‘s.value.R’
Running ‘s1d.barchart.R’
Running ‘s1d.boxplot.R’
Running ‘s1d.class.R’
Running ‘s1d.density.R’
Running ‘s1d.distri.R’
Running ‘s1d.gauss.R’
Running ‘s1d.hist.R’ [16s/16s]
Running ‘s1d.label.R’
Running ‘s1d.match.R’
Running ‘table.image.R’
Running ‘table.value.R’
Running ‘triangle.R’
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
The legacy packages maptools, rgdal, and rgeos, underpinning the sp package,
which was just loaded, were retired in October 2023.
Please refer to R-spatial evolution reports for details, especially
https://r-spatial.org/r/2023/05/15/evolution4.html.
It may be desirable to make the sf package available;
package maintainers should consider adding sf to Suggests:.
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0-18
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘adegraphics.Rmd’ using rmarkdown
Quitting from lines 1145-1155 [plot37] (adegraphics.Rmd)
Error: processing vignette 'adegraphics.Rmd' failed with diagnostics:
there is no package called 'Guerry'
--- failed re-building ‘adegraphics.Rmd’
SUMMARY: processing the following file failed:
‘adegraphics.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0-18
Check: tests
Result: ERROR
Running ‘add.R’ [27s/47s]
Running ‘ade4-functions.R’ [37s/71s]
Running ‘adegraphics.R’ [8s/22s]
Running ‘nbgraph.R’
Running ‘panelSpatial.R’
Running ‘parameter.R’
Running ‘s.arrow.R’
Running ‘s.class.R’
Running ‘s.corcircle.R’
Running ‘s.density.R’
Running ‘s.distri.R’ [5s/15s]
Running ‘s.image.R’ [7s/12s]
Running ‘s.label.R’
Running ‘s.logo.R’
Running ‘s.match.R’
Running ‘s.traject.R’
Running ‘s.value.R’
Running ‘s1d.barchart.R’
Running ‘s1d.boxplot.R’
Running ‘s1d.class.R’ [4s/12s]
Running ‘s1d.density.R’
Running ‘s1d.distri.R’
Running ‘s1d.gauss.R’
Running ‘s1d.hist.R’ [17s/24s]
Running ‘s1d.label.R’
Running ‘s1d.match.R’
Running ‘table.image.R’
Running ‘table.value.R’
Running ‘triangle.R’ [7s/13s]
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
The legacy packages maptools, rgdal, and rgeos, underpinning the sp package,
which was just loaded, were retired in October 2023.
Please refer to R-spatial evolution reports for details, especially
https://r-spatial.org/r/2023/05/15/evolution4.html.
It may be desirable to make the sf package available;
package maintainers should consider adding sf to Suggests:.
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0-18
Check: installed package size
Result: NOTE
installed size is 5.5Mb
sub-directories of 1Mb or more:
R 2.1Mb
doc 2.9Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64