Last updated on 2025-02-06 19:49:31 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.1 | 4.49 | 703.89 | 708.38 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.1.2 | 3.47 | 413.03 | 416.50 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.2 | 830.82 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.2 | 859.68 | OK | |||
| r-devel-windows-x86_64 | 0.1.1 | 7.00 | 551.00 | 558.00 | NOTE | |
| r-patched-linux-x86_64 | 0.1.1 | 4.93 | 655.83 | 660.76 | OK | |
| r-release-linux-x86_64 | 0.1.1 | 4.36 | 654.38 | 658.74 | OK | |
| r-release-macos-arm64 | 0.1.2 | 409.00 | ERROR | |||
| r-release-macos-x86_64 | 0.1.2 | 480.00 | OK | |||
| r-release-windows-x86_64 | 0.1.2 | 8.00 | 317.00 | 325.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | 224.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.1.0 | 349.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.1 | 9.00 | 757.00 | 766.00 | OK |
Version: 0.1.1
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘addCodelistAttribute.R’ ‘codelistDiagnostics.R’
‘cohortDiagnostics.R’ ‘databaseDiagnostics.R’ ‘matchedDiagnostics.R’
‘mockPhenotypeR.R’ ‘phenotypeDiagnostics.R’ ‘populationDiagnostics.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-windows-x86_64
Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘a01_DatabaseDiagnostics.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
Quitting from lines 35-49 [unnamed-chunk-3] (a01_DatabaseDiagnostics.Rmd)
Error: processing vignette 'a01_DatabaseDiagnostics.Rmd' failed with diagnostics:
rapi_execute: Failed to run query
Error: IO Error: Could not write file "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/RtmpvtnklB/synpuf-1k_5.3_1.1.duckdb": No space left on device
--- failed re-building ‘a01_DatabaseDiagnostics.Rmd’
--- re-building ‘a02_CodelistDiagnostics.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
Warning in close.connection(con) :
Problem closing connection: No space left on device
Quitting from lines 30-55 [unnamed-chunk-2] (a02_CodelistDiagnostics.Rmd)
Error: processing vignette 'a02_CodelistDiagnostics.Rmd' failed with diagnostics:
rapi_execute: Failed to run query
Error: IO Error: Could not write file "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/Rtmpn8JnzN/synpuf-1k_5.3_1.1.duckdb": No space left on device
--- failed re-building ‘a02_CodelistDiagnostics.Rmd’
--- re-building ‘a03_CohortDiagnostics.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
Quitting from lines 36-61 [unnamed-chunk-3] (a03_CohortDiagnostics.Rmd)
Error: processing vignette 'a03_CohortDiagnostics.Rmd' failed with diagnostics:
rapi_execute: Failed to run query
Error: IO Error: Could not write file "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/Rtmp3lztfz/synpuf-1k_5.3_1.1.duckdb": No space left on device
--- failed re-building ‘a03_CohortDiagnostics.Rmd’
--- re-building ‘a04_MatchedDiagnostics.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
--- finished re-building ‘a04_MatchedDiagnostics.Rmd’
--- re-building ‘a05_PopulationDiagnostics.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
Warning in file(con, "w") :
cannot open file 'a05_PopulationDiagnostics.knit.md': No space left on device
Error: processing vignette 'a05_PopulationDiagnostics.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘a05_PopulationDiagnostics.Rmd’
SUMMARY: processing the following files failed:
‘a01_DatabaseDiagnostics.Rmd’ ‘a02_CodelistDiagnostics.Rmd’
‘a03_CohortDiagnostics.Rmd’ ‘a05_PopulationDiagnostics.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-arm64