Last updated on 2024-11-14 20:49:13 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.4.1 | 8.01 | 163.64 | 171.65 | NOTE | --no-vignettes |
| r-devel-linux-x86_64-debian-gcc | 1.4.1 | 5.37 | 107.96 | 113.33 | NOTE | --no-vignettes |
| r-devel-linux-x86_64-fedora-clang | 1.4.1 | 547.10 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.4.1 | 513.99 | ERROR | |||
| r-devel-windows-x86_64 | 1.4.1 | 10.00 | 179.00 | 189.00 | NOTE | --no-vignettes |
| r-patched-linux-x86_64 | 1.4.1 | 7.08 | 149.20 | 156.28 | NOTE | --no-vignettes |
| r-release-linux-x86_64 | 1.4.1 | 7.51 | 151.04 | 158.55 | NOTE | --no-vignettes |
| r-release-macos-arm64 | 1.4.1 | 398.00 | NOTE | |||
| r-release-macos-x86_64 | 1.4.1 | 731.00 | NOTE | |||
| r-release-windows-x86_64 | 1.4.1 | 10.00 | 209.00 | 219.00 | NOTE | --no-vignettes |
| r-oldrel-macos-arm64 | 1.4.1 | 417.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.4.1 | 1371.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.4.1 | 12.00 | 229.00 | 241.00 | OK | --no-vignettes |
Version: 1.4.1
Flags: --no-vignettes
Check: Rd files
Result: NOTE
checkRd: (-1) BD_shift.Rd:67-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BD_shift.Rd:74-77: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BD_shift.Rd:78-82: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BD_shift.Rd:83-87: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) heavy_SIP.Rd:69-71: Lost braces in \itemize; meant \describe ?
checkRd: (-1) heavy_SIP.Rd:72-75: Lost braces in \itemize; meant \describe ?
checkRd: (-1) heavy_SIP.Rd:76-79: Lost braces in \itemize; meant \describe ?
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 1.4.1
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘igraph’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.4.1
Check: Rd files
Result: NOTE
checkRd: (-1) BD_shift.Rd:67-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BD_shift.Rd:74-77: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BD_shift.Rd:78-82: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BD_shift.Rd:83-87: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) data-physeq_rep3.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) heavy_SIP.Rd:69-71: Lost braces in \itemize; meant \describe ?
checkRd: (-1) heavy_SIP.Rd:72-75: Lost braces in \itemize; meant \describe ?
checkRd: (-1) heavy_SIP.Rd:76-79: Lost braces in \itemize; meant \describe ?
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64
Version: 1.4.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘BD_shifts.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/BD_shifts_files/figure-html/plot_wmean-1.png
672x336 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 13804 bytes
Input file size = 14674 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12275
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12275
Output IDAT size = 12275 bytes (1529 bytes decrease)
Output file size = 12353 bytes (2321 bytes = 15.82% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/BD_shifts_files/figure-html/wmean_m_plot-1.png
672x336 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35036 bytes
Input file size = 35162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28147
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28147
Output IDAT size = 28147 bytes (6889 bytes decrease)
Output file size = 28225 bytes (6937 bytes = 19.73% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/BD_shifts_files/figure-html/shift_plot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 57343 bytes
Input file size = 57493 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 44134
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 44134
Output IDAT size = 44134 bytes (13209 bytes decrease)
Output file size = 44212 bytes (13281 bytes = 23.10% decrease)
--- finished re-building ‘BD_shifts.Rmd’
--- re-building ‘HTSSIP_intro.Rmd’ using rmarkdown
--- finished re-building ‘HTSSIP_intro.Rmd’
--- re-building ‘HTSSIP_sim.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/HTSSIP_sim_files/figure-html/unnamed-chunk-12-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24341 bytes
Input file size = 24443 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19131
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19131
Output IDAT size = 19131 bytes (5210 bytes decrease)
Output file size = 19209 bytes (5234 bytes = 21.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/HTSSIP_sim_files/figure-html/unnamed-chunk-14-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24466 bytes
Input file size = 24568 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19208
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19208
Output IDAT size = 19208 bytes (5258 bytes decrease)
Output file size = 19286 bytes (5282 bytes = 21.50% decrease)
--- finished re-building ‘HTSSIP_sim.Rmd’
--- re-building ‘MW_HR_SIP.Rmd’ using rmarkdown
Quitting from lines 76-77 [unnamed-chunk-4] (MW_HR_SIP.Rmd)
Error: processing vignette 'MW_HR_SIP.Rmd' failed with diagnostics:
could not find function "sample_data"
--- failed re-building ‘MW_HR_SIP.Rmd’
--- re-building ‘beta_diversity_ordinations.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/beta_diversity_ordinations_files/figure-html/unnamed-chunk-9-1.png
720x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 112951 bytes
Input file size = 113185 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 93742
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 93742
Output IDAT size = 93742 bytes (19209 bytes decrease)
Output file size = 93820 bytes (19365 bytes = 17.11% decrease)
--- finished re-building ‘beta_diversity_ordinations.Rmd’
--- re-building ‘heavy_SIP.Rmd’ using rmarkdown
Quitting from lines 64-65 [unnamed-chunk-4] (heavy_SIP.Rmd)
Error: processing vignette 'heavy_SIP.Rmd' failed with diagnostics:
could not find function "sample_data"
--- failed re-building ‘heavy_SIP.Rmd’
--- re-building ‘qSIP.Rmd’ using rmarkdown
Quitting from lines 96-101 [unnamed-chunk-7] (qSIP.Rmd)
Error: processing vignette 'qSIP.Rmd' failed with diagnostics:
could not find function "sample_data"
--- failed re-building ‘qSIP.Rmd’
--- re-building ‘quant_incorp.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/quant_incorp_files/figure-html/unnamed-chunk-10-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 11794 bytes
Input file size = 11884 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9761
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9761
Output IDAT size = 9761 bytes (2033 bytes decrease)
Output file size = 9839 bytes (2045 bytes = 17.21% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/quant_incorp_files/figure-html/unnamed-chunk-11-1.png
288x288 pixels, 8 bits/pixel, 241 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 3884 bytes
Input file size = 4697 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3489
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3489
Output IDAT size = 3489 bytes (395 bytes decrease)
Output file size = 3567 bytes (1130 bytes = 24.06% decrease)
--- finished re-building ‘quant_incorp.Rmd’
SUMMARY: processing the following files failed:
‘MW_HR_SIP.Rmd’ ‘heavy_SIP.Rmd’ ‘qSIP.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.4.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘BD_shifts.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/BD_shifts_files/figure-html/plot_wmean-1.png
672x336 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 13804 bytes
Input file size = 14674 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12275
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12275
Output IDAT size = 12275 bytes (1529 bytes decrease)
Output file size = 12353 bytes (2321 bytes = 15.82% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/BD_shifts_files/figure-html/wmean_m_plot-1.png
672x336 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35832 bytes
Input file size = 35958 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28556
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28556
Output IDAT size = 28556 bytes (7276 bytes decrease)
Output file size = 28634 bytes (7324 bytes = 20.37% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/BD_shifts_files/figure-html/shift_plot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 57497 bytes
Input file size = 57659 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 44224
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 44224
Output IDAT size = 44224 bytes (13273 bytes decrease)
Output file size = 44302 bytes (13357 bytes = 23.17% decrease)
--- finished re-building ‘BD_shifts.Rmd’
--- re-building ‘HTSSIP_intro.Rmd’ using rmarkdown
--- finished re-building ‘HTSSIP_intro.Rmd’
--- re-building ‘HTSSIP_sim.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/HTSSIP_sim_files/figure-html/unnamed-chunk-12-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24341 bytes
Input file size = 24443 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19131
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19131
Output IDAT size = 19131 bytes (5210 bytes decrease)
Output file size = 19209 bytes (5234 bytes = 21.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/HTSSIP_sim_files/figure-html/unnamed-chunk-14-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24466 bytes
Input file size = 24568 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19208
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19208
Output IDAT size = 19208 bytes (5258 bytes decrease)
Output file size = 19286 bytes (5282 bytes = 21.50% decrease)
--- finished re-building ‘HTSSIP_sim.Rmd’
--- re-building ‘MW_HR_SIP.Rmd’ using rmarkdown
Quitting from lines 76-77 [unnamed-chunk-4] (MW_HR_SIP.Rmd)
Error: processing vignette 'MW_HR_SIP.Rmd' failed with diagnostics:
could not find function "sample_data"
--- failed re-building ‘MW_HR_SIP.Rmd’
--- re-building ‘beta_diversity_ordinations.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/beta_diversity_ordinations_files/figure-html/unnamed-chunk-9-1.png
720x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 112540 bytes
Input file size = 112774 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 93578
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 93578
Output IDAT size = 93578 bytes (18962 bytes decrease)
Output file size = 93656 bytes (19118 bytes = 16.95% decrease)
--- finished re-building ‘beta_diversity_ordinations.Rmd’
--- re-building ‘heavy_SIP.Rmd’ using rmarkdown
Quitting from lines 64-65 [unnamed-chunk-4] (heavy_SIP.Rmd)
Error: processing vignette 'heavy_SIP.Rmd' failed with diagnostics:
could not find function "sample_data"
--- failed re-building ‘heavy_SIP.Rmd’
--- re-building ‘qSIP.Rmd’ using rmarkdown
Quitting from lines 96-101 [unnamed-chunk-7] (qSIP.Rmd)
Error: processing vignette 'qSIP.Rmd' failed with diagnostics:
could not find function "sample_data"
--- failed re-building ‘qSIP.Rmd’
--- re-building ‘quant_incorp.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/quant_incorp_files/figure-html/unnamed-chunk-10-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 11794 bytes
Input file size = 11884 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9761
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9761
Output IDAT size = 9761 bytes (2033 bytes decrease)
Output file size = 9839 bytes (2045 bytes = 17.21% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/HTSSIP.Rcheck/vign_test/HTSSIP/vignettes/quant_incorp_files/figure-html/unnamed-chunk-11-1.png
288x288 pixels, 8 bits/pixel, 241 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 3884 bytes
Input file size = 4697 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3489
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3489
Output IDAT size = 3489 bytes (395 bytes decrease)
Output file size = 3567 bytes (1130 bytes = 24.06% decrease)
--- finished re-building ‘quant_incorp.Rmd’
SUMMARY: processing the following files failed:
‘MW_HR_SIP.Rmd’ ‘heavy_SIP.Rmd’ ‘qSIP.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc