Last updated on 2024-11-23 20:48:21 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.4 | 6.33 | 730.18 | 736.51 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.4 | 4.08 | 568.53 | 572.61 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.4 | 1225.07 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.4 | 1161.84 | ERROR | |||
| r-devel-windows-x86_64 | 0.1.4 | 8.00 | 579.00 | 587.00 | OK | |
| r-patched-linux-x86_64 | 0.1.4 | 6.06 | 696.46 | 702.52 | OK | |
| r-release-linux-x86_64 | 0.1.3 | 4.20 | 666.46 | 670.66 | OK | |
| r-release-macos-arm64 | 0.1.4 | 339.00 | OK | |||
| r-release-macos-x86_64 | 0.1.4 | 508.00 | OK | |||
| r-release-windows-x86_64 | 0.1.4 | 8.00 | 632.00 | 640.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.4 | 340.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.1.4 | 486.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.4 | 10.00 | 832.00 | 842.00 | OK |
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [208s/286s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(CohortSymmetry)
>
> test_check("CohortSymmetry")
Note: method with signature 'DBIConnection#Id' chosen for function 'dbExistsTable',
target signature 'duckdb_connection#Id'.
"duckdb_connection#ANY" would also be valid
`days_prior_observation` casted to character.
===========================>--- 89% | ETA: 0s
===========================>--- 89% | ETA: 0s
===========================>--- 89% | ETA: 0s
`days_prior_observation` casted to character.
===========================>--- 89% | ETA: 0s
`days_prior_observation` casted to character.
-- 1 combination of 4 had index always before marker
`days_prior_observation` casted to character.
-- 1 combination of 4 had index always before marker
`days_prior_observation` casted to character.
Joining with `by = join_by(result_id, cdm_name)`
===========================>--- 89% | ETA: 0s
`days_prior_observation` casted to character.
Joining with `by = join_by(result_id, cdm_name)`
`days_prior_observation` casted to character.
`days_prior_observation` casted to character.
`days_prior_observation` casted to character.
[ FAIL 1 | WARN 139 | SKIP 53 | PASS 51 ]
══ Skipped tests (53) ══════════════════════════════════════════════════════════
• On CRAN (53): 'test-attrition.R:2:3', 'test-attrition.R:63:3',
'test-attrition.R:149:3', 'test-attrition.R:310:3', 'test-attrition.R:397:3',
'test-attrition.R:461:3', 'test-attrition.R:592:3', 'test-attrition.R:769:3',
'test-displayTable.R:30:3', 'test-displayTable.R:58:3',
'test-displayTable.R:86:3', 'test-eunomia.R:2:3', 'test-eunomia.R:65:3',
'test-generateSequenceCohortSet.R:3:3',
'test-generateSequenceCohortSet.R:20:3',
'test-generateSequenceCohortSet.R:96:3',
'test-generateSequenceCohortSet.R:153:3',
'test-generateSequenceCohortSet.R:205:3',
'test-generateSequenceCohortSet.R:259:3',
'test-generateSequenceCohortSet.R:288:3',
'test-generateSequenceCohortSet.R:330:3',
'test-generateSequenceCohortSet.R:356:3',
'test-generateSequenceCohortSet.R:427:3',
'test-generateSequenceCohortSet.R:515:3',
'test-generateSequenceCohortSet.R:663:3',
'test-generateSequenceCohortSet.R:751:3',
'test-generateSequenceCohortSet.R:764:3',
'test-generateSequenceCohortSet.R:776:3',
'test-generateSequenceCohortSet.R:788:3',
'test-generateSequenceCohortSet.R:800:3',
'test-generateSequenceCohortSet.R:818:3',
'test-generateSequenceCohortSet.R:836:3',
'test-generateSequenceCohortSet.R:848:3',
'test-generateSequenceCohortSet.R:859:3',
'test-generateSequenceCohortSet.R:870:3',
'test-generateSequenceCohortSet.R:894:3', 'test-plotSequenceRatio.R:41:3',
'test-plotSequenceRatio.R:85:3', 'test-plotTemporalSymmetry.R:42:3',
'test-plotTemporalSymmetry.R:86:3', 'test-summariseSequenceRatios.R:203:3',
'test-summariseSequenceRatios.R:415:3',
'test-summariseSequenceRatios.R:522:3',
'test-summariseSequenceRatios.R:604:3',
'test-summariseSequenceRatios.R:763:3',
'test-summariseSequenceRatios.R:801:3',
'test-summariseSequenceRatios.R:839:3',
'test-summariseSequenceRatios.R:877:3',
'test-summariseTemporalSymmetry.R:73:3',
'test-summariseTemporalSymmetry.R:98:3',
'test-summariseTemporalSymmetry.R:156:3', 'test-test-dbs.R:2:3',
'test-test-dbs.R:50:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-summariseTemporalSymmetry.R:30:3'): test summariseTemporalSymmetry ──
is.na(unique(temporal_symmetry$estimate_value)) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 139 | SKIP 53 | PASS 51 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [8m/23m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(CohortSymmetry)
>
> test_check("CohortSymmetry")
Note: method with signature 'DBIConnection#Id' chosen for function 'dbExistsTable',
target signature 'duckdb_connection#Id'.
"duckdb_connection#ANY" would also be valid
=============>----------------- 44% | ETA: 4s
===========================>--- 89% | ETA: 2s
`days_prior_observation` casted to character.
=======================>------- 78% | ETA: 1s
===========================>--- 89% | ETA: 3s
===========================>--- 89% | ETA: 2s
=======================>------- 78% | ETA: 1s
===========================>--- 89% | ETA: 3s
====================>---------- 67% | ETA: 1s
===========================>--- 89% | ETA: 2s
`days_prior_observation` casted to character.
===========================>--- 89% | ETA: 1s
`days_prior_observation` casted to character.
===========================>--- 89% | ETA: 1s
-- 1 combination of 4 had index always before marker
`days_prior_observation` casted to character.
=======================>------- 78% | ETA: 1s
===========================>--- 89% | ETA: 2s
-- 1 combination of 4 had index always before marker
`days_prior_observation` casted to character.
Joining with `by = join_by(result_id, cdm_name)`
=============>----------------- 44% | ETA: 3s
===========================>--- 89% | ETA: 3s
`days_prior_observation` casted to character.
Joining with `by = join_by(result_id, cdm_name)`
===========================>--- 89% | ETA: 1s
`days_prior_observation` casted to character.
`days_prior_observation` casted to character.
`days_prior_observation` casted to character.
[ FAIL 1 | WARN 139 | SKIP 53 | PASS 51 ]
══ Skipped tests (53) ══════════════════════════════════════════════════════════
• On CRAN (53): 'test-attrition.R:2:3', 'test-attrition.R:63:3',
'test-attrition.R:149:3', 'test-attrition.R:310:3', 'test-attrition.R:397:3',
'test-attrition.R:461:3', 'test-attrition.R:592:3', 'test-attrition.R:769:3',
'test-displayTable.R:30:3', 'test-displayTable.R:58:3',
'test-displayTable.R:86:3', 'test-eunomia.R:2:3', 'test-eunomia.R:65:3',
'test-generateSequenceCohortSet.R:3:3',
'test-generateSequenceCohortSet.R:20:3',
'test-generateSequenceCohortSet.R:96:3',
'test-generateSequenceCohortSet.R:153:3',
'test-generateSequenceCohortSet.R:205:3',
'test-generateSequenceCohortSet.R:259:3',
'test-generateSequenceCohortSet.R:288:3',
'test-generateSequenceCohortSet.R:330:3',
'test-generateSequenceCohortSet.R:356:3',
'test-generateSequenceCohortSet.R:427:3',
'test-generateSequenceCohortSet.R:515:3',
'test-generateSequenceCohortSet.R:663:3',
'test-generateSequenceCohortSet.R:751:3',
'test-generateSequenceCohortSet.R:764:3',
'test-generateSequenceCohortSet.R:776:3',
'test-generateSequenceCohortSet.R:788:3',
'test-generateSequenceCohortSet.R:800:3',
'test-generateSequenceCohortSet.R:818:3',
'test-generateSequenceCohortSet.R:836:3',
'test-generateSequenceCohortSet.R:848:3',
'test-generateSequenceCohortSet.R:859:3',
'test-generateSequenceCohortSet.R:870:3',
'test-generateSequenceCohortSet.R:894:3', 'test-plotSequenceRatio.R:41:3',
'test-plotSequenceRatio.R:85:3', 'test-plotTemporalSymmetry.R:42:3',
'test-plotTemporalSymmetry.R:86:3', 'test-summariseSequenceRatios.R:203:3',
'test-summariseSequenceRatios.R:415:3',
'test-summariseSequenceRatios.R:522:3',
'test-summariseSequenceRatios.R:604:3',
'test-summariseSequenceRatios.R:763:3',
'test-summariseSequenceRatios.R:801:3',
'test-summariseSequenceRatios.R:839:3',
'test-summariseSequenceRatios.R:877:3',
'test-summariseTemporalSymmetry.R:73:3',
'test-summariseTemporalSymmetry.R:98:3',
'test-summariseTemporalSymmetry.R:156:3', 'test-test-dbs.R:2:3',
'test-test-dbs.R:50:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-summariseTemporalSymmetry.R:30:3'): test summariseTemporalSymmetry ──
is.na(unique(temporal_symmetry$estimate_value)) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 139 | SKIP 53 | PASS 51 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [446s/446s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(CohortSymmetry)
>
> test_check("CohortSymmetry")
Note: method with signature 'DBIConnection#Id' chosen for function 'dbExistsTable',
target signature 'duckdb_connection#Id'.
"duckdb_connection#ANY" would also be valid
===========================>--- 89% | ETA: 0s
`days_prior_observation` casted to character.
===========================>--- 89% | ETA: 0s
===========================>--- 89% | ETA: 1s
===========================>--- 89% | ETA: 0s
`days_prior_observation` casted to character.
===========================>--- 89% | ETA: 0s
`days_prior_observation` casted to character.
===========================>--- 89% | ETA: 0s
-- 1 combination of 4 had index always before marker
`days_prior_observation` casted to character.
===========================>--- 89% | ETA: 0s
-- 1 combination of 4 had index always before marker
`days_prior_observation` casted to character.
Joining with `by = join_by(result_id, cdm_name)`
===========================>--- 89% | ETA: 0s
`days_prior_observation` casted to character.
Joining with `by = join_by(result_id, cdm_name)`
===========================>--- 89% | ETA: 0s
`days_prior_observation` casted to character.
`days_prior_observation` casted to character.
`days_prior_observation` casted to character.
[ FAIL 1 | WARN 139 | SKIP 53 | PASS 51 ]
══ Skipped tests (53) ══════════════════════════════════════════════════════════
• On CRAN (53): 'test-attrition.R:2:3', 'test-attrition.R:63:3',
'test-attrition.R:149:3', 'test-attrition.R:310:3', 'test-attrition.R:397:3',
'test-attrition.R:461:3', 'test-attrition.R:592:3', 'test-attrition.R:769:3',
'test-displayTable.R:30:3', 'test-displayTable.R:58:3',
'test-displayTable.R:86:3', 'test-eunomia.R:2:3', 'test-eunomia.R:65:3',
'test-generateSequenceCohortSet.R:3:3',
'test-generateSequenceCohortSet.R:20:3',
'test-generateSequenceCohortSet.R:96:3',
'test-generateSequenceCohortSet.R:153:3',
'test-generateSequenceCohortSet.R:205:3',
'test-generateSequenceCohortSet.R:259:3',
'test-generateSequenceCohortSet.R:288:3',
'test-generateSequenceCohortSet.R:330:3',
'test-generateSequenceCohortSet.R:356:3',
'test-generateSequenceCohortSet.R:427:3',
'test-generateSequenceCohortSet.R:515:3',
'test-generateSequenceCohortSet.R:663:3',
'test-generateSequenceCohortSet.R:751:3',
'test-generateSequenceCohortSet.R:764:3',
'test-generateSequenceCohortSet.R:776:3',
'test-generateSequenceCohortSet.R:788:3',
'test-generateSequenceCohortSet.R:800:3',
'test-generateSequenceCohortSet.R:818:3',
'test-generateSequenceCohortSet.R:836:3',
'test-generateSequenceCohortSet.R:848:3',
'test-generateSequenceCohortSet.R:859:3',
'test-generateSequenceCohortSet.R:870:3',
'test-generateSequenceCohortSet.R:894:3', 'test-plotSequenceRatio.R:41:3',
'test-plotSequenceRatio.R:85:3', 'test-plotTemporalSymmetry.R:42:3',
'test-plotTemporalSymmetry.R:86:3', 'test-summariseSequenceRatios.R:203:3',
'test-summariseSequenceRatios.R:415:3',
'test-summariseSequenceRatios.R:522:3',
'test-summariseSequenceRatios.R:604:3',
'test-summariseSequenceRatios.R:763:3',
'test-summariseSequenceRatios.R:801:3',
'test-summariseSequenceRatios.R:839:3',
'test-summariseSequenceRatios.R:877:3',
'test-summariseTemporalSymmetry.R:73:3',
'test-summariseTemporalSymmetry.R:98:3',
'test-summariseTemporalSymmetry.R:156:3', 'test-test-dbs.R:2:3',
'test-test-dbs.R:50:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-summariseTemporalSymmetry.R:30:3'): test summariseTemporalSymmetry ──
is.na(unique(temporal_symmetry$estimate_value)) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 139 | SKIP 53 | PASS 51 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc