c0dd3ea034db81de334729dd7aa983af *DESCRIPTION
99337811f025d860258cbe6bdf98f458 *NAMESPACE
af46bdadb3850c9a783462c689c16a25 *NEWS.md
f8ca6b08b67433340085895ecdc6af08 *R/determine_split_regions.R
d361ac1fe3599a49202ca95f125da4ba *R/globals.R
76deff6f093b75b52bbbff361d8eee84 *R/messaging.R
478d7e4565e2e7139fa550b0afac4f8c *R/process_gtf.R
e714d3143bf87fb26c450c50a6c6df2a *R/scShardSplitRef-options.R
df6cc46bc7fae1a55b713f3d5065b35a *R/scShardSplitRef-package.R
5f02847ef0cd14858cfaa6ec5d3ed5d5 *R/validate_inputs.R
114df8c80e752ac66a92b934836ddc0b *R/zzz.R
eeff2122f5010494205f3d5dd32656d4 *README.md
358c63f0cc5bcb6054469865a6d0861a *build/vignette.rds
da1cd46bc095ea27eb3430f85c6b9e8e *inst/doc/scShardSplitRef.R
87ad6cd13c96a5c76acdd9a0edc7e626 *inst/doc/scShardSplitRef.Rmd
f41b615e1011e2cd5da4357ab24d06b6 *inst/doc/scShardSplitRef.html
b8d08ef43913cac446a7986824c1d711 *inst/doc/scShardSplitRefDetailedAlgorithm.R
dff1b12a8c327c1dee1e1593756453a3 *inst/doc/scShardSplitRefDetailedAlgorithm.Rmd
8a9ddbab971425ec2e44556ae964aa09 *inst/doc/scShardSplitRefDetailedAlgorithm.html
ab4cbbade5f1c54dd7413de7713fa833 *inst/extdata/03_cellranger_arc_barley.config
cd39ad4fc72db7f350e32dcffec6812b *inst/extdata/AlgorithmToy.bed
70b81c084f95aa9a2676c57bcdb0a47a *inst/extdata/AlgorithmToy.gtf
aed1b81759e1b2e60ba2efdb90e1dade *inst/extdata/AlgorithmToy_DetermineSplitReg.bed
1202c3fed30c3f40beea66c5f5dd9f1a *inst/extdata/B1_FINAL_MODIFIED_GTF_subset_1H_2H_morex_3.gtf.gz
096cb65e02fa50989c26f7bfe983c07f *inst/extdata/morex3_subset_1H_2H.bed
420f1d997cf46d68cadd036e8774471f *inst/extdata/morex3_subset_1H_2H.gtf.gz
86708fd547034b5eb0ebedca2f4a46f3 *inst/extdata/morex3_subset_1H_2H_Split_Regions.bed
c374e395592613f5a0f395ae4ef0e825 *inst/scripts/00_GTF_FA_dwld.sh
b43177f62ee60144c660d4095127d17a *man/determine_split_regions.Rd
58d2939ac3b074aabf2267f990109b53 *man/figures/scr_10x_CR_arc_error.png
b8dc29b4b3043faedb34ffb9fcb419e2 *man/process_gtf.Rd
964da0671e25f6f4cb38354ffd5ea49a *man/scShardSplitRef-package.Rd
b17eeca28d76c418fb6a0c486f2bf0bc *man/scShardSplitRef_options.Rd
5857fa629388185c68f37302db913c59 *tests/testthat.R
b75ba2a15644d3ec931084945458e3ea *tests/testthat/test-determine_split_regions.R
34f28e179b7f74ae81f4dad03c6b168f *tests/testthat/test-process_gtf.R
e6168e704b8718098cc02603706a3c3e *tests/testthat/test-split_regions.R
114c67584021f46ecfcb2a62bd80405a *tests/testthat/test-validate_inputs.R
87ad6cd13c96a5c76acdd9a0edc7e626 *vignettes/scShardSplitRef.Rmd
dff1b12a8c327c1dee1e1593756453a3 *vignettes/scShardSplitRefDetailedAlgorithm.Rmd
