bb8d3c30c93891021dfb8b17cfee8836 *DESCRIPTION
e136e3a64851e9e9471950ddc54f95ab *NAMESPACE
5c0ab728b6213d502fe08bc0d74f9f1f *NEWS.md
b9369aa1079854ed85fc99d95e6bf673 *R/app_server.R
5ea309b3c95344fdbd9e9dff2c3fc3e3 *R/app_ui.R
e4d54c0656597e4e5816c219009256d5 *R/golem_utils_server.R
3cb418a7762012999cca1d0d3d2fde10 *R/gui_capabilities.R
e4b68245f178abb29548c14c89209bb9 *R/mod_consolidated_workflows.R
d7c93e1d09067cfa8cf0b14ec4f167bd *R/mod_gui_analysis_workflows.R
b14db9b815eb3ccefbeeacb07c651622 *R/mod_gui_data_workflows.R
e23f3d8af33aa2e831812684229e632d *R/mod_gui_qtrap_pipeline.R
08420b966d0927d3ea66b8464e1dad2f *R/mod_qtrap_qc.R
4516f70f919dab84358cc51b5210d2ce *R/mod_vis_heatmap.R
265d0f78753fb1548e150c15f199aae0 *R/run_app.R
e8fd8d1ed0a8285e23cb6e5a8cc64163 *R/utils_calibration.R
eb5e670360b26d27555fccceb91c70e1 *R/utils_impute.R
f52bfbfa74ca23a50ec71a8100d3cf92 *R/utils_io.R
d892792d8a52dfdbbe7de560138ea195 *R/utils_misc.R
9ec546b4aaa91ff2469853ff1eeb0f8b *R/utils_msms.R
fc200bc038fcd9d454461dbf74960bd2 *R/utils_normalize.R
6698bc1b8b1e5400112797def017d241 *R/utils_preprocessing.R
e7abbef3f47b20993c4b3e127bf467b5 *R/utils_qc_rsd.R
fbab6f35d06f714669f7949247fb8fe9 *R/utils_qtrap.R
dad968be12c085bf92c088200bfc3bba *R/utils_sample_metadata.R
eedda64b020775a247830bd4f5037872 *R/utils_sample_qc.R
5b84ff65075c19c606cdf7b4cb157dc1 *R/utils_visualization_extended.R
fb94989c8aba1a07d20994444701c9b9 *R/workflow.R
41b8493100b5b4e1eff1827661101422 *R/workflow_report.R
ce2100fcc4996f0bdf5f86f5cdd93fad *R/zzz.R
dc87d0e534311233ad4054a54737c2fb *README.md
f132ca93d61a761d4882a4269885f1ac *build/vignette.rds
5e779b0f91deebd6efad75ba0b0da2f0 *inst/app/www/logo.svg
f15aacb7497f7946756826d5f98a1c8c *inst/doc/example_usage.R
73763a998af68ba60218fd8f43e808c8 *inst/doc/example_usage.Rmd
285a1589e98c4c5e449c9ec9be357812 *inst/doc/example_usage.html
723da8b855e7a59960206ccc45db45e8 *inst/extdata/examples/heatmap.csv
3e75f94ca158f436ef43cbe18c4b393c *man/calculate_qc_rsd.Rd
ef32a906668629a0ae3440d3d164a147 *man/check_and_sort_columns.Rd
96a36a0baee4174b388fc6abab4d4be6 *man/check_match.Rd
1d6419c6c87e7e9509bcc54cd609f849 *man/combine_logical_tibbles.Rd
2b973cafb573ab70e9e2cec8660f8e02 *man/compare_omics_groups.Rd
9dba192f35106a85d8dab8038724a74e *man/convert_mrm_data.Rd
98e5a5e488c613529c755513986c19c2 *man/detect_duplicates.Rd
d1c2cc0d6b8a769e1847387bfcc3c9b2 *man/detect_sample_outliers.Rd
4cc393e826b1358e72dc43bf7a7a7546 *man/export_omics_results.Rd
661595bf51ecabfb16838927989c2f2f *man/figures/logo.png
4825805f268f6a1bed9ab3a1c15c3bd5 *man/figures/workflow.png
90b97cef4cb07f8df8befb30cf0d5a80 *man/figures/workflow.svg
777a089d6ac76e56482af8bcba7ede46 *man/filter_blank_features.Rd
799405eb3c35594bb7b5638ee3538730 *man/filter_missing_value.Rd
61de255c33fa9d422933194e8c18543e *man/filter_qc_rsd.Rd
bdd1c817a116edcf8461e7402f9d3530 *man/fit_targeted_calibration.Rd
928f5c22653bf64d0bb9bba492cd33ea *man/flag_underexpressed_features.Rd
33aa660d0350241cbc0970774abc2f9f *man/generate_process_report.Rd
83926dd5fad4d1ad5857d383cbcc8274 *man/generate_sample_metadata.Rd
f451affdaeadd5e8be5e380847d536b9 *man/handle_missing_values.Rd
92b21f23d01a48484ed629b01ff3612a *man/impute_half_min.Rd
6b3dce0fe54134a6053b6c97a4acd4c3 *man/internal_standard_normalize.Rd
2688b09c2b5dd738047024fc549278e4 *man/load_data.Rd
4b6268abf989bd5393bf8a933e8cadc0 *man/load_omics_data.Rd
f56e101b3f13af1e798e8de65a81f536 *man/load_parse_sciex_txt.Rd
b9e236bba41e8185fe58139aa6b35266 *man/ms1_annotation.Rd
679f31735ece104b1ef1751d27167610 *man/omics_example_file.Rd
e3830aab9f404a026496abba721c37e4 *man/omics_gui_capabilities.Rd
a5348666ca86483ab7d5248b60f00d56 *man/plot_lcms_features.Rd
f946cf633d59dce86d7241295905a8ff *man/plot_lipid_data_summary.Rd
4db6dd76455b42b970b741b295a9e04a *man/plot_met_data_summary.Rd
df8d1699483938ca69bd428cc177f4e5 *man/plot_omics_heatmap.Rd
c7db4b431dc0f9cb013187c58d84399a *man/plot_omics_pca.Rd
e086d7bff81720515573ac2659140965 *man/plot_peak_list.Rd
f90199d147fb5e9c84281d37ba45aa2c *man/plot_targeted_calibration.Rd
d1ed78cebb360350824e37ee9f075a0f *man/pqn_normalize.Rd
61a8ed64205e6c2b99281781fd164547 *man/predict_targeted_calibration.Rd
6898edd89daedabf5114cd2aed32efcc *man/process_mrm_duplicates.Rd
c7ff50e7cc2ba516a0d913eacb28f89d *man/process_omics_data.Rd
f7e775612eabd93217051b929fb9f20d *man/qc_normalize.Rd
dc6eb6da7972133bdd4521c24be47e5f *man/run_app.Rd
303db3920f492544b802ede60ae0db27 *man/save_msp.Rd
e79ef1116b35b683233b448e6bcbfc1a *man/transpose_df.Rd
ad7e0a85b05ea30da3d8e27ae8a30da0 *man/validate_omics_data.Rd
71953354370ba30aa1900a563ef4f7e5 *man/write_omics_report.Rd
552f2980ef953570a3ebb0c593209e23 *tests/testthat.R
2fefa46cd0f30ed3cc854879ea5afdd6 *tests/testthat/fixtures/gui_calibration.csv
8578936b8c94d3014664aafdf7b92438 *tests/testthat/fixtures/gui_model.csv
0af7b7fc395a1877a5c22a51adca72e7 *tests/testthat/fixtures/gui_preprocess.csv
f9eaad455a76c9c4923629651d74099c *tests/testthat/fixtures/gui_qtrap_area.tsv
1bb47c32ae503fc57b0323c28437f444 *tests/testthat/fixtures/gui_qtrap_istd.tsv
02efd64dc3916d9ba92c54568db9a9a3 *tests/testthat/fixtures/gui_visual.csv
c799902522f8db91f3af3dcc1ba9986d *tests/testthat/test-consolidated-app.R
cb4fcf3b21eda930815db48262d2c24e *tests/testthat/test-consolidated-io.R
f68e124a8f1090909eb2f0ad6e842e7e *tests/testthat/test-consolidated-servers.R
94d6ae34ea5a16f15955141fffdaa3e0 *tests/testthat/test-extended-visualization.R
845bd0be6f39affb6ba8645b2cfb2420 *tests/testthat/test-ms1-annotation.R
c344297370ac24ab6851f7022196138a *tests/testthat/test-msms-workflows.R
c6f5ceda325309586600eb8c814ad24a *tests/testthat/test-preprocessing.R
f60b855effb8ffc49a3aecd42e9645d9 *tests/testthat/test-qtrap-normalization.R
9749bbb173df73b34ff00a3e59b8415f *tests/testthat/test-samples.R
407d1f93de70f4e927609c1e096f9fc2 *tests/testthat/test-targeted-calibration.R
fdb3002ca8e765d80aadcb0936ed5eeb *tests/testthat/test-workflow.R
73763a998af68ba60218fd8f43e808c8 *vignettes/example_usage.Rmd
