% -*- coding: utf-8 -*-
\newcommand{\Rlogo}{\if{html}{\figure{../../html/Rlogo.svg}{options: class="toplogo" alt="[R logo]"}}\if{latex}{\figure{Rlogo.pdf}{options: width=0.5in}}}

\name{NEWS}
\title{R News}
\encoding{UTF-8}

\section{\Rlogo Changes in R-devel}{
  \subsection{Significant User-Visible Changes}{
    \itemize{
      \item \code{read.dcf()} and \code{write.dcf()} now treat \abbr{DCF}
      files (such as package \file{DESCRIPTION} and repository
      \file{PACKAGES} files) as \abbr{UTF-8}, as required by the Debian
      control file format.  \code{read.dcf()} returns values in
      \abbr{UTF-8} and \code{write.dcf()} always writes \abbr{UTF-8}
      regardless of the session locale; bytes which are not valid
      \abbr{UTF-8} are preserved by escaping them as \samp{<xx>} rather
      than being re-encoded via a \samp{Encoding} field.  As a
      consequence, the \code{useBytes} argument of \code{write.dcf()} is
      ignored, and non-\abbr{UTF-8} \file{DESCRIPTION} files (e.g. those
      declaring \samp{Encoding: latin1}) are no longer re-encoded on
      reading.

      \item Fixing \code{rbinom()}, see \PR{19049} below, to reproduce
      old results needs \code{RNGkind()} to get a new \code{binom.kind}
      argument and, e.g. \code{RNGversion("4.6")} keeps previous behaviour.
    }
  }

  \subsection{New Features}{
    \itemize{
      \item \code{boxplot()}: when \code{notch=TRUE}, new option \code{warnN=FALSE}
      suppresses warnings about \dQuote{notches outside hinges}.

      \item New function \code{cumvar()} to calculate cumulative variances.

      \item The \code{print()} method for \code{rle()} now passes \code{...}
      to \code{str()}.

      \item \code{rmultinom()} now uses \I{Kahan}'s arithmetic instead of
      \code{LDOUBLE} to avoid platform dependency, thanks to \I{Mauricio Vargas}'
      proposal in \PR{18693}.

      \item \emph{Object not found} errors now signal error conditions
      of class \code{objectNotFoundError}. \emph{Function not found}
      errors signal conditions of the subclass
      \code{functionNotFoundError}.

      \item Condition classes used internally for signaling some errors
      are now documented in \code{?conditions}.

      \item The \code{as.data.frame()} methods for atomic \code{vector}
      classes get an optional switch \code{validRN}, with default true to
      fix \PR{19059} and false for some back compatibility, still
      allowing data frames in construction to contain \code{NA}s in row
      names.

      \item \code{tools::Rd2txt()} now replaces \samp{---} and \samp{--}
      by Unicode dashes when the output encoding is UTF-8.

      \item \code{fisher.test()} gains a new option \code{pval.only = TRUE}
      for the 2x2 exact case, with substantial speed gains in the case of large
      counts.

      \item \code{binom.test()} and \code{poisson.test()} can now at
      least optionally compute central two-sided p-values which match
      the confidence intervals.  Same for \code{fisher.test()} in the
      \eqn{2 \times 2}{2 by 2} case and \code{mantelhaen.test()} in
      the \eqn{2 \times 2 \times K}{2 by 2 by K} case if an exact
      conditional test is performed.

      \item New low-level function \code{.OBJSXP()} enables deparsing of
      non-S4 \code{"object"} type objects.

      \item \code{use()} gets an argument \code{pos} with a help example
      showing how to attach a \dQuote{chain} of packages to
      \code{search()}.

      \item New higher-order functions \code{Compose()}, \code{Funcall()}
      and \code{Partial()}.

      \item New functions \code{find_calls()},
      \code{find_calls_in_package_code()},
      \code{gsub_with_transformed_matches()} and
      \code{system_with_capture()} in package \pkg{tools}.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item Installing \R (creating \file{libR.pc}) no longer fails with a
      \command{sed} error when the new \option{--package-metadata} linker flag
      is involved; an \samp{s}-command delimiter other than \samp{:} was needed
      (\PR{19060}, thanks to \I{Jeroen Ooms} and \I{Dirk Eddelbuettel}).
    }
  }

  \subsection{Package Installation}{
    \itemize{
      \item .
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item .
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \code{tools::texi2pdf()} now reports BibTeX warnings;
      in particular, missing references are now noted by
      \command{R CMD check} when re-building PDF vignettes.

      \item \command{R CMD build} now excludes an obsolete
      \file{data/datalist} file when the package uses \samp{LazyData}.
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item \code{structure()} now deprecates the old \dQuote{special}
      substitute \code{attributes}' names \code{".Dim", ".Dimnames", ".Names", ".Tsp", ".Label"}
      in favour of the respective \code{"dim", "dimnames", "names", "tsp", "levels"}
      names.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item For \code{x <-  <large-POSIXlt>}, for some boundary cases
      with \code{x$sec - floor(x$sec)} close to 1, \code{c(x)} could
      become one second ahead of \code{x} in \R 4.6.0;  \I{subassignments}
      such as \code{x[i] <- val} have improved, thanks to suggestions by
      \I{Suharto Anggono} in \PR{18989}.

      \item In an \R installation without \acronym{NLS}, e.g., from
      \option{--disable-nls} configuration, the C \code{ngettext()}
      replacement now also keeps plural for \dQuote{0 things}, thanks to
      \I{Michael Chirico}'s \PR{19065}.

      \item \code{as.data.frame.vector(<row.names_w/_NA>)} now signals
      the same error as \code{data.frame()}, fixing \I{Hervé Pagès}'
      \PR{19059}.  From \I{Suharto Anggono}'s comment #c4, it gives the same
      error also when \code{row.names = RN} explicitly, where \code{RN} has
      \code{NA}s.

      \item \code{.leap.seconds} again has no \code{"tzone"} attribute, as
      in earlier \R versions, fixing \PR{19072} thanks to \I{Suharto Anggono}.

      \item \code{as.POSIXct(x)} for \code{POSIXlt} object \code{x} with
      \code{.Machine$integer.max - x$year < 1900} no longer suffers from C
      level integer overflow, thanks to \I{Suharto Anggono}'s patch for
      \PR{19038}.  Currently, this does not apply when the
      \code{"internal"} code for date-time conversion and printing is in
      use, as e.g., on Windows and macOS.

      \item \code{wilcox.test()} gains new optional argument
      \code{digits.zap}, \emph{and} the default for argument
      \code{digits.rank} is changed from \code{Inf} to \code{7},
      addressing bugs \PR{18035} and \PR{19071}, in order to deal with
      both ties of almost equal numbers and almost zeros of differences.

      \item Exclude patterns from \file{.Rbuildignore} are now processed
      \emph{before} preparing the package directory for the tarball,
      avoiding redundant file copies from the source directory (\PR{17549}).
      In particular, when a source package \file{foo/} folder contains broken
      symlinks matching an exclude pattern, \command{R CMD build foo}
      now succeeds, omitting these, thus fixing \PR{18186}.  (Thanks to
      \I{Ivan Krylov} and others, notably \I{Jenny Bryan} and \I{R Dev
      Day @ useR! 2025} contributors.)

      \item \code{strat_ratio != 1} in \code{rfree1way} did not work as
      advertised.

      \item Zeros in the \code{prob} argument to \code{power.free1way.test}
      triggered an error and are now handled correctly.

      \item Fix for \PR{18874};  \code{"null"} widths/heights in
      \pkg{grid} layouts are zero if widths/heights to allocate are
      zero. (Thanks to \I{Maciej Nasinski} and \I{Trevor Davis}.)

      \item Fix for \PR{19055};  additional documentation for
      \code{embedFonts()}. (Thanks to \I{Chris Danek} and \I{Ivan Krylov}.)

      \item \code{merge.data.frame} now returns the correct column names when
      at least one of the merged data frames has zero rows and at least one of
      the merged data frames has only one column, fixing \PR{18930}. Thanks to
      \I{David Molnar} and \I{Gabriel Becker}.

      \item \code{trace()} now works for functions whose S3 class
      attribute has more than one string, e.g., \CRANpkg{S7} generics
      and methods. Thanks to \I{Hadley Wickham} for the patch.

      \item \code{as(object, to) <- value} no longer treats \code{to}
      as a class union when it was registered via \code{setOldClass()}.

      \item In \pkg{methods}, \code{setOldClass(..., S4Class = )}
      no longer warns about undefined subclasses when the supplied S4
      class inherits from a class union.

      \item Fix for \PR{19094};  fill/stroke path based on text with
      \code{col=NA}. Thanks to \I{Trevor Davis}.

      \item Fix for \PR{18842};  better documentation and warnings
      when specify inappropriate \code{col} to \code{filled.contour()}.
      Thanks to \I{Darakhshan Nehal}.

      \item \code{cor(*, method="kendall")} and \code{cov()} now use the fast
      N*log(N) algorithm suggested in \PR{18934} and offered by \I{David Simcha}
      on R-devel in 2010.  With thanks to the \I{R Dev Day @ Nantes 2026}
      contributors, notably \I{Charles Bordet} and \I{Alexis Derumigny}.

      \item In \code{nls}, follow suggestion by \I{Ben Bolker} to reorder
      named vectors for \code{lower} and \code{upper} arguments to match
      names of coefficients (\PR{18415}).

      \item \code{summary(<aov>)} for an almost perfect fit now warns
      analogously to \code{summary(<lm>)}, using the same check.  Fixes
      fixes \PR{18341} thanks to \sQuote{\I{R Dev Day @ useR! 2026}}
      participants \I{Deepansh Khurana}, \I{Stefan Linner} and \I{Oscar de Leon}.

      \item \code{dummy.coef()} becomes more robust to non-syntactic
      variable names, fixing \PR{18468}.  Thanks to \I{Bill Dunlap} and
      \sQuote{\I{R Dev Day}} participants \I{Vincent Arel-Bundock},
      \I{Cynthia Huang}, \I{Tina Rozsos} and \I{Marina Marinelli}.

      \item Package \pkg{methods} provides a method for implicit generic
      function \code{rcond} with signature
      \code{c(x="ANY", norm="missing")} so that \code{rcond(x)}
      does not break after \code{setGeneric("rcond")}.

      \item \code{rbinom()}'s \abbr{BTPE} algorithm is fixed thanks to
      \I{Kate Hudson}'s findings and report in \PR{19049}.  To ensure
      reproducibility, \code{RNGkind()} gets new argument
      \code{binom.kind}.

      \item Fix segfault in \code{postscript()} and \code{pdf()} if set
      \code{papersize} option to very long string (\PR{19108}).  Thanks
      to \I{Kevin Ushey}.

      \item Fix segfault in \code{grid::gpar()} if set \code{fontfamily}
      longer than 200 characters (\PR{19107}).  Thanks
      to \I{Kevin Ushey}.
    }
  }
}


\section{\Rlogo Changes in R 4.6.1 patched}{

  \subsection{Bug Fixes}{
    \itemize{
      \item In plain-text help (\code{Rd2txt}), paragraphs are again
      recognized even when started with a non-indented Rd comment,
      fixing a regression in \R 4.4.0.

      \item \code{rhyper(N, m, n, k)} now switches to the \dQuote{large}
      scenario when \code{m + n} is larger than
      \code{.Machine$integer.max}, preventing integer overflow, thanks to
      \I{Jonathan Blood}'s report on R-devel.

      \item Fix long standing (Fortran compiler optimization related) bug
      in \code{nlminb} with constraints, thanks to \I{Kasper Kristensen}'s
      \PR{19086} report and patch.

      \item Fix for \PR{19100}: \code{seq.int} was not handling
      non-vector \code{along.width} arguments properly. Thanks to
      \I{Mitchell O'Hara-Wild}.

      \item Wrapper objects make sure data pointers remain once obtained
      remain valid as long as a wrapper object is reachable. Reported by
      \I{Ivan Krylov}.

      \item Now \code{PROTECT()} in \code{SubassignTypeFix}, fixing
      \PR{19110} thanks to \I{Kevin Ushey}.

      \item \code{writeChar()} in a multibyte locale counts characters and
      bytes consistently and no longer overflows, thanks to \I{Kevin
	Ushey}'s report and patch in \PR{19112}.

      \item \code{dim(a) <- vec} now checks for too large \code{prod(vec)},
      thanks to \I{Kevin Ushey}'s report and patch in \PR{19109}.
    }
  }
}

\section{\Rlogo Changes in R 4.6.1}{

  \subsection{New Features}{
    \itemize{
      \item The \LaTeX class \samp{jss} bundled in
      \file{share/texmf/tex/latex/jss.cls} has been updated
      to work with \samp{hyperref} version 7.01q (2026/04/24).

      \item Plain-text (and legacy HTML) conversion for a simple Rd
      \verb{\eqn{}} now handles \verb{\geq}, \verb{\leq}, \verb{\neq}
      and \verb{\ne} in addition to \verb{\ge} and \verb{\le} (\PR{19070}).
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{abbreviate(<non-ASCII>)} now works better, using
      \code{iswlower()} and \code{*upper()} to treat \dQuote{wide}
      characters, thanks to \I{Kevin}'s \PR{19058}.

      \item \code{cut(1:11, {})} now signals an error for the invalid
      \code{breaks}, fixing \PR{19057}, thanks to \I{Kevin Ushey}.

      \item \code{all(<symbol>)} signals an error now, as some similar
      coercions; previously, the coercion of the symbol resulted
      in \code{NULL} internally, raised a warning, and could access illegal
      memory; thanks to \I{Kevin Ushey}'s \PR{19054}.

      \item \code{stl()} now checks its 3 x 3 tuning parameters on the R level;
      \code{stl(*, s.window = 0)} now \dQuote{works} instead dumping core,
      \code{stl(*, s.window = 1)} \dQuote{works} correctly, too.  Also, the
      \code{summary()} method mentions the robustness \code{weights} only
      if any robustness iterations happened.

      Further, \code{stl()} is now based on C code, translated from previous
      Fortran, triggered by a \I{flang 22} compiler optimization bug
      (\command{-O2}).

      \item The border case \code{zapsmall(x, digits=Inf)} where \code{x}
      contains an \code{Inf} entry no longer returns all \code{NaN} but
      rather \code{x}.
      The improved help page now has more non-default examples.

      \item \code{wilcox.test(x, exact=FALSE, correct = k)}'s p-value
      computation got a missing \code{dnorm(z)} factor, and so did the
      2-sample case, in addition to more fixes.

      \item The data part of \code{getGenerics()} listed package names for
      generic functions defined in more than one package.  Now it
      lists generic function names, as intended.  Thanks to \I{Michael
      Chirico} for report and patch proposal (\PR{19080}).

      \item Overly long \code{dyn.load()} error messages (C level
      \code{dlerror()}), should no longer corrupt its state, thanks to
      \I{Ivan Krylov}'s \PR{19029} report and patch.

      \item \code{as.matrix(<POSIXlt>)} again produces a \emph{numeric}
      matrix, and the \code{c()} and \I{subassignment} methods for
      \code{POSIXlt} objects work correctly more often, e.g., without a
      \code{"tzone"} attribute, back porting a few of the \PR{18989} fixes
      from R-devel, both thanks to \I{Suharto Anggono}.

      \item In \pkg{methods}, \code{as()} now correctly coerces S4
      objects to S4 superclasses extending old-style classes, instead
      of returning only the S3 part.
    }
  }
}

\section{\Rlogo Changes in R 4.6.0}{

  \subsection{Significant User-Visible Changes}{
    \itemize{
      \item The R citation now provides a \abbr{DOI}
      (\I{10.32614/R.manuals}): please update your
      bibliographies accordingly.

      %% GCC 10 and Intel 2021.1 definitely support this: GCC 9 may
      \item The default C++ standard has been changed to C++20 where
      available (which it is on all known platforms from 2021 on): if
      not C++17 is used if available otherwise C++ is not supported (as
      before).

      (GCC 16 has also switched to C++20 as its default.)

      Packages can request C++17 if essential.

      \item The Sweave driver \code{Rtangle} no longer puts empty lines
      at the end of tangled scripts.
    }
  }

  \subsection{New Features}{
    \itemize{
      \item The default \code{AIC} and \code{BIC} methods now check whether
      the \pkg{methods} namespace is loaded rather than \pkg{stats4}. They
      still use \code{stats4::logLik} (and \code{stats4::nobs}), but packages
      no longer need to load \pkg{stats4} explicitly.

      \item \code{confint.default()} now also works on S4 objects, as long as
      suitable \code{coef()} and \code{vcov()} methods exist.

      \item \code{binomial(identity)} and \code{quasibinomial(identity)} now work
      without having to quote the argument.

      \item \code{str()} now shows more via \code{format()} for external
      pointers.

      \item \code{terms(<formula>, specials = *)} now treats non-syntactic
      specials more gracefully, thanks to \I{Mikael Jagan}'s \PR{18568}.

      \item \code{help.start()} gets a \code{lib.loc} option and its
      default for \code{make.packages.html()} is enhanced to allow, e.g.,
      fast access to \code{.Library} when that contains only base and
      recommended packages.

      \item In \file{*.Rd} help files, the \verb{\linkS4class} macro now
      also works for links to other packages via
      \verb{\linkS4class[<pkg>]{<myClass>}}, much nicer than the \dQuote{workaround}
      \verb{\link[<pkg>:<myClass>-class]{<myClass>}} necessary in earlier
      versions of \R.

      Packages with the new syntax need to formally depend on
      \samp{R >= 4.6.0}.

      \item \code{tools::analyze_license()} now also computes
      \href{https://spdx.dev/learn/handling-license-info/}{\abbr{SPDX}
	license identifiers},
      thanks to \I{Thierry Onkelinx} and \I{LLuís Revilla}.

      \item \code{read.dcf()} now recognizes lines starting with
      \samp{#} as comment lines.  By \I{Dirk Eddelbuettel}, \I{Laurent
      Gatto} and \I{Hugo Gruson}.

      \item \code{tcltk::tclVersion()} now only optionally includes the
      \sQuote{patch level}, as Tcl full versions can be of the form
      \code{8.7a5} or \code{9.0b1} without three clear components.

      \item \code{untar(tar = "internal")} supports \code{extras =
	"-P"} to use unchanged the recorded file paths (as many external
      \command{tar} programs do).

      \item \code{extSoftVersion()[["zstd"]]} now reports the version of
      the \command{zstd} compression library if available, thanks to
      \I{Trevor Davis}' patch proposal in \PR{18914}.

      \item New logical \code{option()} \code{quiet}, defaulting to
      false, set to \code{TRUE} by \R's command-line option
      \option{--quiet} (and similar), now can be switched during an \R
      session.  Prompted by \I{Dirk Eddelbuettel}'s proposal in \PR{18913}.

      \item Credentials for basic HTTP authentication with download method
      \code{"libcurl"} can now be provided in a \file{netrc} file.  The
      path to the file can be specified in \code{options("netrc")}.

      \item \code{tools::deparseLatex()} gains a \code{math} argument,
      now used by the default \code{bibstyle} to format \code{bibentry()}
      fields with \samp{$...$} syntax via Rd \verb{\eqn} markup.

      \item \code{gzcon()} can now decompress a concatenation of compressed
      streams \PR{18887}.

      \item Bibliographic citations and references in Rd files can now
      be auto-generated from \I{bibentries} in bibliographic databases
      in R or BibTeX formats.
      See
      \code{\link{RShowDoc}("R-exts#Bibliographic-citations-and-references")}
      for more information.

      \item Arguments to \code{loadNamespace()} which will be ignored
      because the namespace is already loaded are now noted.

      \item \code{chkDots()}' optional argument \code{allowed} has been
      implemented thanks to \I{Trevor Davis}' proposal in \PR{18936}.

      \item New function \code{messageCondition()} to create structured
      \code{"message"} objects analogous to \code{warningCondition()}
      and \code{errorCondition()} (\PR{18940}, by \I{Trevor Davis}).

      \item \code{wilcox.test()} can now perform exact (conditional)
      inference in case of ties.  Based on contributions by
      \I{Torsten Hothorn}.

      \item \code{wilcox.test()} can now optionally compute improved
      asymptotic p-values by including up to 3 correction terms of the
      \I{Edgeworth} series for the normal approximation.

      \item \code{barplot(.., orderH = *)} for stacked bar plots allows to
      sort the stacks each according to size.

      \item New argument \code{panel.first} for \code{hist()}
      (via \code{plot.histogram()}), \code{barplot()}, \code{bxp()},
      and hence implicitly \code{boxplot()}.
      All except the former also gain a new \code{panel.last}.
      Suggested by \I{Marieke Stolte} and \I{Julian Welz}.

      \item \code{plot.default()} gets a new switch \code{lim2} to indicate
      that the default \code{xlim} and \code{ylim} range computations only
      use \emph{jointly} finite x- and y-values; indirectly suggested in
      \PR{7986} by \I{Jincai Jiang}.

      \item \file{Rman.css}, the stylesheet for the
      \command{texi2any}-generated HTML versions of the \R manuals, was
      improved following joint efforts at the \sQuote{\I{R Dev Days}}
      of \I{useR! 2024} and \I{RSECon25}.

      \item New system Rd macro \command{\\manual\{\var{name}\}\{\var{node}\}}
      to refer to a specific section \emph{etc} (possibly empty, for
      \samp{Top}) of one of the \R manuals (e.g., \samp{R-exts}).

      \item \code{list.files()} now has optional argument \code{fixed}
      to allow literal pattern matching.  Suggested and implemented
      by \I{Duncan Murdoch} in \PR{18925}.

      \item \code{substring(txt, i1, i2)}, \code{substr(..)} and their
      replacement versions now accept \code{i2 = NULL} to mean \dQuote{to
      the end_of_string}, thus fulfilling \I{Kevin Ushey} (and others')
      suggestions in \PR{18851}.

      \item The default method for \code{pretty()} gets a new switch \code{bounds} for
      completeness, corresponding to \code{.pretty()}.  Also, it now
      catches typos such as \code{eps.corrected = 2}, noted in \PR{18521}
      by \I{Mikko Korpela}.

      \item Plain-text help now renders Rd \verb{\describe} lists using
      line breaks after item labels.  Set
      \code{tools::Rd2txt_options(descStyle=NULL)} to get the old
      behaviour with a simple space; a \code{"colon"} variant is also
      available.

      \item \code{x \%notin\% table} newly in \pkg{base} is an idiom
      for \code{!(x \%in\% table)} and provided almost entirely for
      convenience and code readability, from an R-devel suggestion, after
      many years of private definitions mostly hidden in packages,
      including in \R's \pkg{tools} package.

      \item The default method of \code{sequence()} gets a new option
      \code{recycle} to swap between current (not fully recycling) and
      future behaviour where all three of \code{(nvec, from, by)} are
      jointly recycled.

      \item \code{ftable()}s default method and the \code{as.table()}
      method for \code{"ftable"}s get a \code{perm} argument with back
      compatible default.  The \code{as.table()} method also gets a
      \code{named.dim = FALSE} switch, no longer creating a named
      \code{dim(<result>)} by default.

      \item \code{match.arg()} gets a new option \code{several.ok = "all"},
      fulfilling the wish of \I{Jim Hester} in \PR{16659}.

      \item \code{provideDimnames()} gets new switch \code{use.names}, as
      proposed including patch by \I{Mikael Jagan}, in \PR{18975}.

      \item The default \code{summary()} is more informative for
      character vectors, optionally resorting to the factor method
      via the new argument \code{character.method = "factor"}, e.g.,
      when summarizing a data frame (\PR{16750}).

      It also provides more useful summaries for complex vectors, with
      \code{polar} determining if polar or cartesian coordinates are more
      relevant; mostly based on a proposal by \I{Mikael Jagan}.

      \item Error messages from failed Rd \verb{\Sexpr} code now include
      the call from the original condition (if available).
      Warning messages now include Rd source locations.

      \item When the environment variable \env{R_WARN_BOUNDS_OPT} is set to
      \code{"yes"}, \code{options(warn = val)} will check if \code{val} is
      inside \code{-1:2}; this may happen unconditionally in the future.

      \item \code{weighted.residuals()} now returns weighted working
      residuals for \code{"glm"} objects. It used to return deviance
      residuals, but these do not give the one-step approximated
      \code{dfbeta} values, as pointed out by \I{Ravi
      Varadhan}. \code{influence.glm()} has been amended so that it now
      returns an object with both a \code{"wt.res"} and a
      \code{"dev.res"} element.

      \item Several influence measures for \code{"glm"} objects have
      been updated to use Pearson residuals rather than deviance
      residuals (the latter are not unbiased) and to not use
      leave-one-out estimates of dispersion in models with fixed
      dispersion. Thanks to \I{Ravi Varadhan} for discussions and
      testing of these updates.

      \item \R now supports custom binary types which are of the form
      \code{"<system>.binary.<build>"} where \code{<system>} is
      lower-case name (letters only) of the system and \code{<build>} is
      the name of the build (alphanumeric and dashes). The corresponding
      paths returned by \code{contrib.url} (which govern the repository
      layout) with the above \code{type=} have the form
      \code{bin/<system>/<build>/contrib/<x.y>} where \code{<x.y>}
      is the \R version without patch level. This is a generalisation of
      the binary types previously supported on macOS. In addition, binary
      packages can have the extensions \code{.tar.bz2}, \code{.tar.xz},
      \code{.tar.zst} and \code{.tar.zstd} with the corresponding
      compression support.

      \item The value of \code{.Platform$pkgType} which defines the
      native binary type for the current build of \R can be overridden
      with \env{R_PLATFORM_PKGTYPE} environment variable (previously
      this was only set by the macOS builds of \R). This should be
      typically only done by the author of a binary \R distribution to
      define the type of binaries supported by that build of \R.

      \item If \R uses custom binary type in its
      \code{.Platform$pkgType} then \command{R CMD INSTALL --build} will
      produce \code{<package>_<ver>_R_<system>-<build>.tar.xz} binary
      files. Please note that future versions may use \code{.zstd}
      compression by default so package tooling should support any of
      the above mentioned extensions.

      \item New facilities have been introduced for package integrity
      verification and package signing. The optional file \file{SHA256}
      in a package contains \abbr{SHA}-256 hashes, lengths and paths
      of files provided in the package allowing for more reliable integrity
      verification (relative to \file{MD5}). This file is now generated
      by default in \command{R CMD INSTALL --build} and optionally via
      \command{R CMD build --sha256}. A package can be signed by creating a
      detached GnuPG signature file \file{SHA256.sig} signing the
      entirety of the \file{SHA256} file. Upon installation, the
      signature is verified using GnuPG, thus ensuring the integrity of
      the \file{SHA256} file and by induction all files in the package.
      Both source and binary packages can be signed. Currently, this only
      applies to tar-based packages, and the command-line GnuPG
      \command{gpg} tool (or equivalent tool named in the \code{GPG}
      environment variable) has to be available for signing and
      verification to work. \command{R CMD INSTALL --sign} can be used to
      sign binary packages, including its use with \option{--build}.
      System-wide GnuPG keyrings for the \R installation
      can be placed in \code{\var{R_HOME}/etc/keyrings} as files with
      \file{.gpg} extensions and will be checked first before consulting
      user's GnuPG keyring (if present).

      \item Experimentally, several math library (\file{math.h}) functions,
      such as \code{exp(.)}, \code{log1p()}, \code{sin()}, \code{atanh()},
      when called from \R, are now ensured to give fully accurate results
      in a small neighbourhood of special values, such as \code{exp(0) == 1},
      \code{log1p(0) == 0}, etc.
      This makes \R slightly less platform dependent for these functions,
      notably on platforms with less accurate system math libraries, see also
      \url{https://blog.r-project.org/2026/01/30/debugging-sensitivity-to-c-math-library-on-linux/}.

      \item Function \code{free1way()} implementing \I{semiparametrically}
      efficient inference procedures (likelihood- and permutation-based)
      in distribution-free stratified K-sample one-way layouts was added
      to the \pkg{stats} package.  Approximate (via
      \code{power.free1way.test()}) and simulation-based (utilising
      \code{rfree1way()} for random number generation) power-assessment
      and sample-size planning as well as model diagnostics (available
      from a \code{plot} method and probability-probability plots in
      \code{ppplot()}) complement the functionality.
      Provided by \I{Torsten Hothorn}.

      \item \code{plot.data.frame()} now supports a \code{formula} argument.

      \item New Rd macro \verb{\linkS4methods{}}, e.g., for easier linking to
      method docs in other packages, proposed and coded by \I{Mikael Jagan}
      in \PR{18998}.

      \item Class \code{"difftime"} is now also among the S4
      \code{"OldClasses"}.

      \item New function \code{bitstring()} as a user-friendly wrapper
      around \code{intToBits()}, etc.

      \item \code{plot.lm()} now omits the smoother in the residuals vs
      leverage plot. This never made much sense, but if you really want it,
      you can force the old behaviour by setting \code{panel.raw=panel.smooth}.

      \item \code{hatvalues()} now has a method for \code{nls} (nonlinear
      model) results, prompted by the proposal of \I{Patrice Kiener} and
      \I{Heather Turner} in \PR{18897}.

      \item The Sweave driver \code{RweaveLatex} now allows the value of
      logical and numerical chunk options (only) to be the name of an
      object defined in earlier, evaluated code chunks. This is useful
      to pass computed values to options. For options set this way for
      weaving purposes, the \code{Rtangle} driver rather uses their
      default values, with a warning.
      By \I{Vincent Goulet}.

      \item The Sweave driver \code{RweaveLatex} gains an option to
      include unparsable R code or arbitrary text in code chunks. Chunks
      marked as \code{ignore.on.weave = TRUE} are completely ignored on
      weaving, i.e., not even parsed. The chunks however remain written
      out verbatim on tangling.

      Similarly, the driver \code{Rtangle} gains an option to control
      the extraction of code chunks. Chunks marked as
      \code{ignore.on.tangle=TRUE} are processed as usual on weaving,
      but left out of the tangled scripts (or thrown away when
      \code{split=TRUE}).

      The drivers also support the shorter aliases \code{weave} for
      \code{!ignore.on.weave}, and \code{tangle} for
      \code{!ignore.on.tangle}. A further option \code{ignore},
      available for both drivers, sets \code{ignore.on.weave} and
      \code{ignore.on.tangle} at once.

      By \I{Vincent Goulet}.

      \item The Sweave driver \code{Rtangle} now provides an option
      \code{chunk.sep} to control the separator between code chunks in
      tangled scripts (with an unchanged default of \code{\\n\\n}).
      Using \code{check.sep=FALSE} omits the separator (between two
      chunks when used as a chunk option).
      By \I{Vincent Goulet}.

      \item The Sweave driver \code{Rtangle} now provides an option
      \code{extension} to specify the extension, without the leading
      dot, for the file name of a tangled code chunk when splitting is
      selected (the option has no effect with \code{split=FALSE}). If
      \code{TRUE}, the default extension of \code{Rtangle} (usually
      \file{.R}) is used; if \code{FALSE}, no extension is added to the
      file name.
      By \I{Vincent Goulet}.

      \item New function \code{SweaveGetSourceName} in package
      \pkg{utils} to obtain the name of the file being woven by an
      \code{Sweave} process launched from the command line.
      By \I{Vincent Goulet}.
    }
  }

  \subsection{Graphics}{
    \itemize{
      \item The graphics engine version, \code{R_GE_version}, has been
      bumped to \code{17} and so packages that provide graphics devices
      should be reinstalled.

      The \code{glyphFont()} function gains a \code{variations}
      argument, which allows variable font axes to be specified,
      e.g., \code{c(wght = 100)}.

      Only the \code{quartz()} device and Cairo-based graphics devices
      (but not \code{cairo_pdf()}) support variable font axes so far.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item \command{configure} appends \command{bsdtar} to the list of
      command names it tries when finding a default for \env{TAR}.

      \item Failures in building the documentation for the base packages,
      including from parsing their Rd files, are no longer ignored by
      \command{make docs}.

      \item Building the \R manuals now requires \I{Texinfo} 6.8 or later.
      % For the new Rman.css. Also features @example <lang> and @displaymath.

      \item A new \env{LIBR_LDFLAGS} defaulting to \env{LDFLAGS} allows more
      flexibility, e.g., for distributions such as Gentoo, Debian or
      Ubuntu, fixing \PR{18992}; additionally a \code{make} failure to
      create \file{libR.pc} should no longer be ignored, fixing \PR{18993};
      both thanks to \I{Benjamin Drung}.
    }
  }

  \subsection{Checking an Installation}{
    \itemize{
      \item There is a new directory \file{tests/C++Standards} which
      contains small packages which can be test-installed to check
      support for various C++ standards.  This is principally for use on
      Windows as on a Unix-alike this partially duplicates tests done by
      \command{configure} --- although it can also be used to test the
      behaviour of \command{R CMD INSTALL} on unsupported standards.
    }
  }

  \subsection{Package Installation}{
    \itemize{
      \item Specifying C++11 or C++14 in \file{src/Makevars} has long
      given a note: in 99\% of CRAN packages the specification was
      unnecessary as the default C++17 sufficed (in a few cases with a
      deprecation warning from some compilers).

      Support for these standards has been removed: the default C++
      standard will be used.

      \command{R CMD config} variables \code{CXX11}, \code{CXX14} and
      their associated \code{CXXxxFLAGS}, \code{CXXxxPICFLAGS}
      \code{CXXxxSTD}, \code{SHLIBCXXxxLD} and \code{SHLIBCXXxxLDFLAGS}
      variables are no longer supported and reported as
      \sQuote{defunct}.

      \item When installing binary packages the time stamp in the
      \code{"Built"} field is considered even if the package version is
      identical to allow binary package repositories to update binaries
      without the need to increase the package version.

      \item The \code{"Built"} column returned by
      \code{installed.packages()} and \code{old.packages()} now contains
      the full value of the \code{"Built"} entry from the (installed)
      \file{DESCRIPTION} file. Previously, only the \R version from the
      \code{"Built"} entry was returned.

      \item If the timestamp passed as \option{--built-timestamp} to
      \command{R CMD INSTALL} is in RFC-2822 form (with time-zone offset)
      it will be converted to ISO UTC form to conform to the format
      used by \R for purposes described above. (\PR{19037}, thanks to
      \I{Dirk Eddelbuettel})
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item New functions \code{GEcreateDD()} and \code{GEfreeDD()}
      for allocating (and initialising) \code{DevDesc} structures.
      Can be used by external graphics devices.
      Satisfies \PR{18292}.

      \item New function \code{R_eval_with_gd()} designed to \dQuote{lock} a
      graphics device during call to \code{eval()} within device drawing
      routines.
      External \emph{on-screen} graphics devices should consider using
      this function to avoid crashes from the device being closed by the
      user (e.g., a mouse click) during drawing.

      \item Declarations for non-API functions \code{LOGICAL0},
      \code{INTEGER0}, \code{REAL0}, \code{COMPLEX0}, and \code{RAW0}
      have been removed from installed header files.

      \item Non-API entry points \code{Rf_acopy_string} and
      \code{Rf_lazy_duplicate} have been added to those reported
      by \command{R CMD check}.

      \item Packages using the non-API functions \code{ATTRIB} and
      \code{SET_ATTRIB} will now receive check \samp{NOTE}s.
      See \sQuote{Writing R Extensions} for alternatives to use.

      \item \command{R CMD check} \samp{NOTE}s on the use of these
      non-API entry points have been upgraded to \samp{WARNING}s in
      preparation for removing declarations and, where possible, hiding
      these entry points:
      \code{R_nchar}, \code{R_tryWrap},
      \code{Rf_GetOption},
      \code{R_lsInternal},
      \code{BODY}, \code{FORMALS}, \code{CLOENV},
      \code{SET_TYPEOF},
      \code{STRING_PTR},
      \code{R_duplicate_attr},
      \code{getConnection}, \code{R_data_class},
      \code{STRING_PTR}, \code{SET_OBJECT},
      \code{ATTRIB}, \code{SET_ATTRIB}, \code{Rf_findVarInFrame3}.

      \item The deprecated macros \code{CHARACTER_DATA} and
      \code{CHARACTER_POINTER} now return \code{const} pointers since using
      writable pointers in packages is not safe.

      \item New function \code{DATAPTR_RW()} for use in implementing
      \I{ALTREP} \code{Dataptr} methods. This function should not be
      used in any other contexts.

      \item New function \code{R_class()} as the \code{C} equivalent of
      \code{class()} in \R.

      \item New function \code{Rf_isScalarString}.

      \item The \code{R_ObjectTable} type definitions formerly in
      \file{R_ext/Callbacks.h} are now available in the new header file
      \file{R_ext/ObjectTable.h}. This new header file should be used in
      packages instead of \file{R_ext/Callbacks.h}.

      \item Task callback support declared in \file{R_ext/Callbacks.h}
      has been enabled again. It was disabled for \R 4.5.0.

      \item The non-API header file \file{R_ext/PrtUtil.h} is no longer
      copied to the installed \file{include} directory.

      \item New function \code{R_mapAttrib} for iterating over the
      attributes of an object.

      \item New functions \code{R_altrep_class_name} and
      \code{R_altrep_class_package} for retrieving the class name symbol
      and package name symbol of an \I{ALTREP} object. These should be
      used instead of \code{ALTREP_CLASS}.

      \item New function \code{R_getAttributes} returns the same result
      as the \R function \code{attributes}. New functions
      \code{R_getAttribCount}, \code{R_getAttribNames},
      \code{R_hasAttrib}, \code{R_nrow}, and \code{R_ncol}.

      \item The function \code{Rf_isFrame} has been removed; use
      \code{Rf_isDataFrame} instead.

      \item The function \code{VECTOR_PTR} has been removed.

      The non-API function \code{DATAPTR} is no longer declared in an
      installed header file.

      \item These entry points are now marked as hidden and no longer
      have declarations in installed header files: \code{ENVFLAGS},
      \code{EXTPTR_PROT}, \code{FRAME}, \code{ENCLOS},
      \code{EXTPTR_PTR}, \code{EXTPTR_TAG}, \code{HASHTAB},
      \code{IS_S4_OBJECT}, \code{LEVELS}, \code{NAMED}, \code{OBJECT},
      \code{R_shallow_duplicate_attr}, \code{Rf_isValidString},
      \code{Rf_lazy_duplicate}, \code{Rf_NonNullStringMatch},
      \code{SETLENGTH}, \code{SETLEVELS}, \code{SET_BODY},
      \code{SET_CLOENV}, \code{SET_ENCLOS}, \code{SET_FORMALS},
      \code{SET_ENVFLAGS}, \code{SET_FRAME}, \code{SET_GROWABLE_BIT},
      \code{SET_HASHTAB}, \code{SET_NAMED}, \code{SET_S4_OBJECT},
      \code{SET_TRUELENGTH}, \code{STDVEC_DATAPTR}, \code{TRUELENGTH},
      \code{UNSET_S4_OBJECT}, \code{XTRUELENGTH}.

      \item New experimental API for working with variable bindings in
      environments. The function \code{R_GetBindingType} identifies the
      binding type without forcing a delayed or active binding.  New
      bindings care created by \code{R_MakeDelayedBinding},
      \code{R_MakeForcedBinding} and \code{R_MakeMissingBinding}.
      Delayed and forced bindings can be inspected with
      \code{R_ForcedBindingExpression},
      \code{R_DelayedBindingExpression}, and
      \code{R_DelayedBindingEnvironment}.  Bindings for \code{...} in
      function call environments can be examined with
      \code{R_findDotsEnv}, \code{R_DotsExist}, \code{R_DotsLength},
      \code{R_DotsNames}, \code{R_DotsElt}, \code{R_GetDotType},
      \code{R_DotDelayedExpression}, \code{R_DotDelayedEnvironment}, and
      \code{R_DotForcedExpression}. Contributed by \I{Lionel Henry},
      \I{Davis Vaughan}, and \I{Charlie Gao} in \PR{18928}.

      \item New function \code{R_envSymbols} returns a vector of the
      symbols for which an environment contains bindings (\PR{18928}).

      \item \command{R CMD check} \samp{NOTE}s on the use of the non-API
      entry points \code{PRCODE}, \code{SET_PRCODE}, \code{PRENV},
      \code{SET_PRENV}, \code{PRVALUE}, \code{SET_PRVALUE},
      \code{R_PromiseExpr}, and \code{Rf_allocSExp} have been upgraded
      to \samp{WARNING}s in preparation for removing declarations and,
      where possible, hiding these entry points.

      \item New functions \code{R_getVar} and \code{R_getVarEx}. In most
      cases these can be used instead of the non-API functions
      \code{Rf_findVar} and \code{Rf_findVarInFrame}.  Other cases can
      be handled by the new API for working with variable bindings.

      \item Packages using any non-API variables will now receive check
      \samp{NOTE}s.

      \item New function \code{R_getRegisteredNamespace} finds and
      returns the namespace environment registered for a name, or
      \code{R_NilValue} if none is found.
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} now reports further \command{clang} warnings
      including \code{-Wkeyword-macro}.  This is most commonly seen for
      the C23 keywords \code{bool}, \code{true} and \code{false}, but is
      also seen for \code{nullptr} (C23 and C++11). Masking these by
      macros \emph{may} generate correct code (but not always) and always
      results in confusing-to-read code.
      %% Someone defined 'true' as -1, for example.

      \item The cascaded stylesheet \file{R.css} now adds less vertical
      white space when rendering Rd files' \verb{\itemize},
      \verb{\enumerate}, and \verb{\describe} list \verb{\item}s to HTML.

      Where \R is used via extensive \abbr{IDE}s such as \command{RStudio},
      their maintainers may need to adapt \file{R.css} files accordingly.

      \item \command{R CMD check} when passed a tarball looks at its contents
      and so no longer derives the package name from the tarball name
      (which can now be arbitrary).

      \item Package \file{README.md} files are now installed and
      featured in HTML help.

      \item \code{package.skeleton()} now invisibly returns the path of the
      created directory, similar to \code{prompt()} \abbr{et al.}, and
      allows creating blank skeletons without any R objects.
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item \code{structure(NULL, <name> = <val>)} is now defunct.% deprecated r71841, 2016-12-27
      \item Three \code{tk*.slaves()} functions were deprecated in favor of
      \code{tk*.child()} which do need Tcl/Tk version \code{8.6} or higher.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{chol(x, pivot=TRUE)} now zeroes the trailing submatrix when
      the algorithm stops early. Following the help page instructions on
      how to reconstruct the matrix in positive semidefinite cases gave
      incorrect results if the rank was 2 or more less than the dimension
      (\PR{15853}).

      \item Profiling \code{"mle"} objects (\pkg{stats4} package) could fail
      because profile MLE used starting value from full MLE. Now starts from profile MLE
      from previous step.

      \item Setting \code{attributes} on primitive functions is now an
      error; previously it modified without copying (as noticed by
      \I{Henrik Bengtsson} on the R-devel mailing list).

      \I{Relatedly}, changing the \code{environment()} of a primitive function
      does no longer happen and gives a warning (to become an error, later).

      \item Dataset \code{LifeCycleSavings} had a misspelled row name:
      \code{"Guatamala"} was corrected to \code{"Guatemala"}.

      \item The \code{Pair(x,y)} construction in the formula interface to
      paired tests did not work with the \code{subset} argument, due to the
      absence of a \code{[.Pair} method, which has now been added (\PR{18898}).

      \item Subsetting \code{"table"} objects keeps S3 classes more
      consistently, fixing \PR{18845}.

      \item When \code{browser()} is active or when otherwise debugging, \R code
      such as \code{if(TRUE)} no longer triggers a new browser level, fixing
      \PR{18885} (differently than the fix for \PR{15770}), with thanks to
      \I{Ivan Krylov}.

      \item \code{text()} now truncates \code{labels} to maximum length
      of \code{x} and \code{y} (if it is longer), fixing \PR{7084}.
      Thanks to \I{Heather Turner}, \I{Ella Kaye}, and
      \I{Philippe Grosjean}.

      \item \code{<Date> \%in\% set} is again as fast as it was
      before \R 4.3.0, \emph{via} a new S3 method \code{mtfrm.Date}.

      \code{<character> \%in\% <Date>} and vice versa are now
      documented to work in concordance with \code{==} and as an exception
      to the typical \code{match()} behaviour which relies on
      \dQuote{univariate} \code{mtfrm()} alone.

      \item It is now possible to convert \emph{to} \code{"snpc"} units
      via, e.g., \code{grid::convertWidth()}, fixing \PR{18915}. Thanks to
      \I{Trevor Davis}.

      \item The \code{precip} dataset had typos in the names
      \code{"Bismarck"} and \code{"Pittsburgh"} (\PR{18895}).

      \item \code{tools::checkReplaceFuns()} now deals better with
      replacement methods \emph{not} available as regular functions in the
      namespace.

      \item \code{length(xpr) <- n} now also works for \code{expression}
      vectors, the same as for \code{list}s, i.e., padding with \code{NULL}
      entries if the length is increased.  Thanks to \I{Mikael Jagan}'s
      \PR{18917}.

      \item \code{<complex>[i] <- NA} now only sets the \emph{real} part to
      \code{NA}, consistently with the \code{as.complex(NA)} behaviour
      since \R 4.4.0; thanks to \I{Mikael Jagan}'s \PR{18918}.

      \item \code{format(<list>)} calling \code{format.default()} now calls
      generic \code{format()} on each list element (rather than
      \code{format.default()}).

      \item \code{tools::Rd2HTML()} detects paragraphs in more cases of
      \verb{\Sexpr}-generated Rd code, fixing a regression in \R 3.6.0
      originally reported by \I{Georgi Boshnakov} and later also in \PR{18470}.
      An inactive \verb{#ifdef} block no longer breaks the paragraph.

      \item Parsing a multi-line string from Rd \verb{\Sexpr} code no
      longer doubles the newlines.

      \item \code{requireNamespace(.., versionCheck = *)} now shows an
      error and returns \code{FALSE} when the package version check is not
      fulfilled, thanks to \I{Iris Simmons} and \I{Trevor Davis}'s
      \PR{18255}.
      Additionally, the \code{versionCheck} argument is checked and when
      invalid, an error is signalled to avoid subsequent confusing error
      messages.

      \item \code{requireNamespace()} now throws an error even if the
      name space is already loaded if it is called with an unmatched
      argument such as \code{quitely = TRUE} or \code{quiet = TRUE}
      (argument \code{quietly} cannot be abbreviated as it follows
      \code{\dots}).
      %% side effect of c88540
      \item \code{rep()} signals more specific error messages, notably when
      using both \code{times} and \code{each} optional arguments.  Fixes
      \PR{18926}, thanks to \I{Ella Kaye} and collaborators at \I{useR! 2025}'s
      \sQuote{\I{R Dev Day}}.

      \item \code{jitter(x, amount, factor)} becomes more robust for
      non-finite \code{x} or also negative \code{amount}, \code{factor}.
      \code{help(jitter)} is easier to read, fixing \PR{17279}, thanks to
      its contributors.

      \item Plain-text help (\code{Rd2txt}) lacked markup for
      \samp{\cite}d titles, which are now wrapped in single quotes.

      \item Default column labels are now correctly aligned when printing a
      matrix with right alignment (\PR{18943}, thanks to \I{Mikael Jagan}).

      \item \code{poly(fct, n)} signals an error again, for a
      non-\code{ordered} factor \code{fct}, thanks to \I{Roland Fuss}'
      notice on R-devel.

      \item \code{terms(<formula>, simplify=TRUE)} now works correctly also
      in the cases where the formula has more than one term with NAs such
      as \code{f(u, b=NA)} or \code{g(NA)}, finally fixing \PR{15275}
      thanks to \I{Mikael Jagan}'s patch.

      \item The help page \code{example(matplot)} now correctly labels
      Sepal vs Petal dimensions in its first iris data plot, thanks to
      \I{Jeff Dick}'s post on R-devel.

      \item \code{diff(m, lag, dif)} for matrix \code{m} now still returns
      matrices, also when \code{lag * dif > nrow(m)} (\PR{18972}, thanks to
      \I{Mikael Jagan} and \I{Suharto Anggono}).
      \code{diff(<ts-matrix>)} remains matrix, even when it has length zero.

      \item Values returned by active binding functions are now marked as
      not mutable to prevent unintended mutation in complex assignment
      operations.

      \item The default method of \code{sequence()} now allows to
      fully recycle all three of \code{(nvec, from, by)} as always
      documented; with thanks to \I{Mikael Jagan}'s report and patch in
      \PR{18304}.  Its behaviour remains back compatible for now, but can
      be switched to future behaviour via environment variable
      \env{R_sequence_recycle}, or explicit \code{recycle = TRUE}.

      \item \I{Subassignment}, \code{x[ind] <- val}, to 1-dimensional
      \code{array}s no longer \dQuote{drops} them to simple vectors when
      \code{ind} is a name, fixing \PR{18973}, reported by \I{Thomas Soeiro}.

      \item The \code{implicitGeneric} definition for \code{toeplitz()} produced a
      default method that failed when \code{toeplitz(x, r)} was called with
      more than the first argument.  Simple fix from \I{Mikael Jagan}.

      \item The error message for \code{array(dim = c())} now uses
      \code{"'dim'"}, thanks to \I{Hugo Gruson}.

      \item Some legal but strange nested complex assignments are
      handled a bit more robustly in interpreted code.

      \item \code{cacheMetaData()} does not to mangle primitive generics.

      \item The S4 method \code{norm(<ANY>, type = <missing>)} for the implicit
      generic \code{norm()} now uses \code{type = "O"} as has been the
      intention for more than ten years, fixing \PR{18979} thanks to
      \I{Mikael Jagan}.

      \item On Windows terminals \kbd{Ctrl-C} now breaks out of waiting for
      keyboard input, fixing \PR{18982}.

      \item The default \code{summary()} and its factor method now
      label missing values \samp{NAs} rather than \samp{NA's},
      fixing a decades-old grammatical faux pas inherited from S
      (\PR{16348} and \PR{18948}).

      \item Asymmetric \code{toeplitz(x, r)} is type consistent
      now, even when \code{r} of length 0 or 1 is not used directly.  Fixes
      \PR{18996}, thanks to \I{Mikael Jagan}'s patch and test.

      \item \code{format(r)} now keeps \code{names(r)} also for raw
      objects \code{r}.

      \item \code{rep.int()} and \code{rep_len()} again drop names also
      for factors, fixing a regression in \R 4.0.0.  (Thanks to a report
      by \I{Rui Barradas} and \PR{18999} by \I{Suharto Anggono}.)

      \item \code{str(x)} with a \code{list}-like \code{x} of a class
      having an \code{str()} S3 method using \code{NextMethod()}, now no
      longer outputs \code{"List of <...>"} in the default method, thanks
      to \I{Ian Farm}'s report and fix proposal in \PR{19001}.

      \item \code{as.POSIXlt(ch)}, \code{as.Date(ch)} etc now also work
      correctly when \code{ch} contains \code{"Inf"}, via
      \code{strptime(.)}, fixing \PR{19006}.

      \item \code{c(<POSIXlt>, ..)} now fully preserves sub-second
      accuracy, fulfilling a part of \I{Suharto Anggono}'s wishlist
      \PR{18989}.

      \item When \I{subassigning} \code{"POSIXlt"}, e.g., \code{<dat>[i] <- v},
      \code{v} is now converted to the time zone of \code{dat}, before
      being assigned, see \PR{18919}.

      \item The \code{"tzone"} attribute of \code{"POSIXlt"} objects
      should no longer depend on earlier calls, fixing \PR{19005} thanks to
      \I{Ivan Krylov}, a patch by \I{Suharto Anggono} and reports of
      \dQuote{\I{Non-deterministic POSIXlt tzone in Europe/London ..}} on
      R-devel.

      \item In intervals with very low density \code{cdplot()} was
      unreliable, returning probabilities that are greater than one or
      \code{NaN} (\PR{19011}).
      Fix from \I{Christoph Dalitz} and \I{Achim Zeileis}.

      \item \command{R CMD build} now installs packages providing their
      own vignette engine (\PR{18191}).
      Patch by \I{Paul Smith}.

      \item \code{ar.burg()}, \code{ar.yw()} and \code{ar.ols()} deal
      better with non finite AIC values thanks to \I{Simone Giannerini}'s
      remarks on R-devel.

      \item Parsing deeply nested expressions no longer should segfault in
      certain circumstances, fixing five different checks on context stack
      size, thanks to \I{Kevin Ushey}'s report and \I{Michael Chirico}'s
      patch in \PR{18994}.

      \item The internal \code{cwilcox} function used in computations
      for the Wilcoxon distribution is now based on an implementation of
      a formula by \I{Andreas Löffler} provided by \I{Andreas Löffler},
      \I{Aidan Lakshman}, and \I{Ivan Krylov}, substantially reducing
      the memory complexity of the original implementation (\PR{18655}).

      \item When \code{Ops} group methods for matrix-\code{"ts"} return a
      zero-extent matrix, its type is correct now.  E.g., \code{<int> + <dbl>}
      now returns type \code{"double"}, see also \PR{18972}.

      \item \code{intToUtf8(<negative>)} now returns \code{NA} and no
      longer accesses invalid memory, thanks to \I{Kevin Ushey}'s report
      with patch in \PR{19052}.

      \item When \code{file.choose()} is terminated with an \command{EOF},
      it now signals an error rather than returning garbage, thanks to
      \I{Kevin Ushey}'s report and patch in \PR{19053},
    }
  }
}

\section{\Rlogo Changes in R 4.5.3}{

  \subsection{Utilities}{
    \itemize{
      \item \command{tools/fetch-recommended} can be used instead of
      \command{tools/rsync-recommended} to fetch recommended packages
      into \R sources using \command{curl} on systems without
      \command{rsync} or behind firewalls.
    }
  }

  \subsection{Package Installation}{
    \itemize{
      \item C++ standard specifications (\code{CXX_STD =} in
      \file{src/Makevars*} and in the \code{SystemRequirements} field of
      the \file{DESCRIPTION} file) are now checked more thoroughly.
      Invalid values are still ignored but now give a warning, as do
      contradictory specifications.

      \item (Preliminary) support for C++26 has been extended to Windows.

      \item A non-zero exit status from \file{cleanup}, \file{cleanup.win}
      or \file{cleanup.ucrt}, if requested via options \option{--clean} or
      \option{--preclean}, is now reported with a warning.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{all.equal(obj, simple, check.class=FALSE)} now is true, also
      when \code{simple} is a bare atomic vector and \code{obj} has a simple
      class, fixing the first part of \PR{18971} thanks to \I{Jan Gorecki}.

      \item \code{str(x, give.attr=FALSE)} no longer shows attributes when
      \code{x} is a zero length \code{"Date"} or \code{"POSIXt"} object.

      \item Tweaks to binning for \code{bw.SJ()} and \code{bw.ucv()} in the
      very rare case of data which have an extremely small range compared to
      their absolute values, e.g., \code{x <- 6e9 + 6:9}.

      \item Formatting book-type \code{bibentry} objects now converts
      \LaTeX accents also in the publisher and series fields.

      \item \code{model.frame(~1, list(), na.action=na.pass)} and similar
      \dQuote{border-line} uses no longer produce invalid data frames,
      fixing \PR{18977}, reported with patch by \I{Mikael Jagan}.

      \item \code{length(<POSIXlt>) <- v} is more careful about balancing,
      notably when \code{v} is not integer, thanks to \I{Suharto Anggono}'s
      remarks on the mailing list R-devel.

      \item \code{approx(<x_with_ties>, <y_with_NA>, na.rm = FALSE)} now
      should always call the \code{ties()} function, fixing \PR{17604}
      reported by \I{Bill Dunlap}.

      \item \code{besselJ(1, 1e-15)} and similar now give correct results,
      thanks to \I{Leo Mada} and other \I{\dQuote{R-help}ers}.

      \item \code{vignette(\var{pkg}::\var{topic})} is now a documented
      usage variant and confines vignette retrieval to the specified package.

      \item \code{pretty(ch)} again correctly works with \code{ch} a
      character vector of numbers.

      \item \code{persp()} labels the three axes correctly also when C level
      \code{atan2pi()} is available, fixing \PR{19007} by \I{Klaus Schliep}.

      \item Large (tall) subscripts in \I{plotmath} expressions are now
      positioned correctly.  They were being positioned too high.

      \item \code{Ops} group (\code{Arith}, \code{Compare}, \dots) methods for
      matrix-\code{"ts"} now do return (zero length) matrices even when the
      two series do not overlap; a very partial fix of \PR{18972}, which is to
      be fully addressed later.
    }
  }
}

\section{\Rlogo Changes in R 4.5.2}{

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} now handles archives with extension
      \file{.tar} or \file{.tar.zstd} (where \command{zstd} compression
      is supported by the \R build).
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{t.test(c(1:3, Inf))} and similar no longer produce an error but
      return a (still not so useful) \code{"htest"} result, fixing
      \PR{18901}, thanks to \I{Jesse Alderliesten}.

      \item \code{attr(., "tsp") <- val} now uses \code{getOption("ts.eps")}
      instead of hardwired \code{1e-5}; consequently, \code{ts(.., ts.eps=*)}
      now passes \code{ts.eps} to the \code{"tsp"} setting C code;
      both fixing a long-standing \sQuote{\I{FIXME}}.

      \item \code{insertSource()} now ignores the internal
      \code{.packageName} object, avoiding a superfluous message.

      \item In static HTML help, links to vignette files from the default
      \file{doc/index.html} page now also work for packages not installed
      in the default \code{.Library},
      thanks to a report by \I{Patrice Kiener}.

      \item %\code{assignInNamespace("\var{S3method}")} and thus
      \code{fixInNamespace("\var{S3method}")} failed to update the S3
      methods table when the generic was not on the search path.

      \item In plain-text help (\code{Rd2txt}), an initial newline from
      an Rd inline \verb{\eqn} no longer breaks the paragraph.

      \item \code{hist(*, log = "x")} now works without a warning, thanks
      to \I{Martin Smith}'s \PR{18921}.

      \item \I{Subassigning} \code{"POSIXlt"}, i.e., \code{<tdat>[i] <- val}
      and \code{<tdat>[[i]] <- val} now rebalance as they should;
      thanks mostly to \I{Mikael Jagan}'s \PR{18919}.

      \item \code{<POSIXlt>[*]} (re-)setting \code{"balanced"}, fixing
      \PR{18681} comment #7, thanks to \I{Mikael Jagan}.

      \item All four of \code{{col,row}{Sums,Means}(Z, na.rm=TRUE)} now correctly work
      with complex \code{Z} where \code{is.na(Re(Z))} differs from \code{is.na(Im(Z))},
      fixing \PR{18942}, unearthed by \I{Dirk Eddelbuettel}.

      \item Fix for glyph rendering on the \code{quartz()} device when
      there is other (\dQuote{normal}) text drawn on the device.  The
      problem was that the text transformation matrix was not reset
      so glyphs would be rendered incorrectly (often completely outside
      the device, i.e., not visible).

      \item Functions \code{install.packages()} and \code{download.packages()} again
      consult option \code{download.file.method} when the download method is
      unspecified.

      \item \I{Tanguy Barthelemy} and colleagues at the
      \sQuote{\I{R Dev Day}} following \I{Rencontres R} in May 2025
      extended the help page of \code{lm()}, fixing \PR{18058}.
      As suggested by \I{Thomas Soeiro}, such notes were also added to the
      \code{glm()}, \code{poly()} and \code{splines::bs()} and \code{ns()}
      pages.

      \item \code{lbeta(1i, 1)} now signals an error, as \code{lbeta()} is not implemented
      for \code{complex}, fixing \PR{18946} from \I{Ben Bolker} and  \I{Kasper Kristensen}.

      \item The Cairo-based SVG device uses \code{pt} as the default
      document unit also with Cairo >= 1.17.8 (\PR{18912}).

      \item \code{pretty(*, eps.correct = 2)} has been fixed, e.g., to
      avoid over 1 million length result for \code{pretty(c(0, 1e-322), eps.correct = 2)}.

      \item When \code{"POSIXlt"} date-time objects are \code{NA}-padded
      from subsetting or increasing \code{length} in the \code{`[`} or
      \code{`length<-`} methods, the \code{"balanced"} attribute is set
      to \code{NA}, now; noted in \PR{18681}, thanks to \I{Mikael Jagan}.
    }
  }
}

\section{\Rlogo Changes in R 4.5.1}{

  \subsection{New Features}{
    \itemize{
      \item The internal method of \code{unzip()} now follows \code{unzip 6.00}
      in how it handles extracted file paths which contain \code{"../"}.
      With thanks to \I{Ivan Krylov}.
    }
  }

  \subsection{Installation}{
    \itemize{
      \item Standalone \code{nmath} can be built with early-2025
      versions of \command{clang}-based compilers such as \I{LLVM}
      \command{clang}\sspace{}20, Apple \command{clang}\sspace{}17 and Intel
      \command{icx}\sspace{}2025.0.

      \item Tcl/Tk\sspace{}9 can be used to build package \code{tcltk}:
      this has become the default in some Linux distributions.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item Java detection in \code{javareconf} could not detect
      \file{libjvm.*} in the \code{zero} variant of the \abbr{JDK} (\PR{18884}).
      All valid variants as of \abbr{JDK} 24u are now supported.

      \item \code{factanal(.., rotation=*)} now correctly updates
      \code{rotmat}, fixing \PR{18886}.

      \item \code{dnbinom(<large>, <muchlarger>, ..)} now is \code{0}
      correctly, instead of \code{NaN} or \code{Inf} sometimes.

      \item \code{dbinom(<large>, n=Inf, ..)} is \code{0} now correctly,
      instead of \code{NaN} which also fixes many \code{dnbinom()} cases,
      notably those mentioned in \PR{16727} comment #5.

      \item Fixing C level \dQuote{binomial deviance} \code{bd0()} for
      extreme arguments (preventing under-/overflow) solves more \PR{16727}
      cases and also prevents some full accuracy loss in such cases for
      \code{dbinom()}, \code{dnbinom()}, and via \code{dbinom_raw()}
      potentially \code{dgeom()}, \code{dhyper()}, \code{dbeta()}, and
      \code{df()}.

      \item \code{signif(1.**e308, digits)} no longer truncates unnecessarily
      (but still to prevent overflow to \code{Inf}), fixing \PR{18889}.

      \item \code{prettyNum(*, zero.print={>=1-char}, replace.zero=TRUE)}
      now works as documented, thanks to \I{Marttila Mikko} and
      \I{Ivan Krylov}'s messages on R-devel.

      \item \code{pbeta(x, a,b, ..)} for very large \code{a,b} no longer returns
      \code{NaN} but the correct values (0 or 1, or their logs for \code{log.p = TRUE}).
      This improves \I{Mathlib}'s C level \code{bratio()} and hence also
      \code{pnbinom()}, etc..
    }
  }
}

\section{\Rlogo Changes in R 4.5.0}{
  \subsection{New Features}{
    \itemize{
      \item \code{as.integer(rl)} and hence \code{as.raw(rl)} now work for
      a \code{list} of \code{raw(1)} elements, as proposed by \I{Michael
	Chirico}'s \PR{18696}.

      \item \pkg{graphics}' \code{grid()} gains optional argument
      \code{nintLog}.

      \item New functions \code{check_package_urls()} and
      \code{check_package_dois()} in package \pkg{tools} for checking
      URLs and \abbr{DOI}s in package sources.

      \item New \code{head()} and \code{tail()} methods for class
      \code{"ts"} time series, proposed by Spencer Graves on R-devel.

      \item New \code{qr.influence()} function, a \dQuote{bare bones}
      interface to the \code{lm.influence()} leave-one-out diagnostics
      computations; wished for in \PR{18739}.

      \item Package \code{citation()} results auto-generated from the
      package metadata now also provide package \abbr{DOI}s for CRAN and
      Bioconductor packages.

      \item New function \code{grepv()} identical to \code{grep()} except
      for the default \code{value = TRUE}.

      \item \code{methods(<pkg>:::<genfun>)} now does report methods when
      neither the generic nor the methods have been exported.

      \item \code{pdf()} gains an \code{author} argument to set the
      corresponding metadata field, and logical arguments
      \code{timestamp} and \code{producer} to optionally omit the
      respective metadata.
      (Thanks to \I{Edzer Pebesma}.)

      \item \code{grDevices::glyphInfo()} gains a \code{rot} argument
      to allow per-glyph rotation.
      (Thanks to \I{Daniel Sabanes Bove}.)

      \item Package \pkg{tools} now exports functions
      \code{CRAN_current_db()}, \code{CRAN_aliases_db()},
      \code{CRAN_rdxrefs_db()}, \code{CRAN_archive_db()}, and
      \code{CRAN_authors_db()}.

      \item Package \pkg{tools} now exports functions
      \code{R()} and \code{parse_URI_reference()}.

      \item Package \pkg{tools} now exports functions
      \code{base_aliases_db()} and \code{base_rdxrefs_db()}.

      \item It is now possible to set the background color for row and
      column names in the data editor on Windows (\command{Rgui}).

      \item \command{Rterm} on Windows now accepts input lines of unlimited
      length.

      \item \code{file.info()} on Windows now provides file owner name and
      domain.

      \item \code{Sys.info()} on Windows now provides current user domain.

      \item \code{findInterval()} gets new arguments \code{checkSorted}
      and \code{checkNA} which allow skipping relatively costly checks;
      related to \PR{16567}.

      \item \code{pnorm(x)} underflows more gracefully.

      \item \code{get(nam, env)} now signals a \emph{classed} error,
      \code{"getMissingError"}, as \dQuote{subclass} of
      \code{"missingArgError"}  where the latter is used also in similar
      situations, e.g., \code{f <- function(x) exp(x); try(f())} .

      \item The set operations now avoid the \code{as.vector()}
      transformation for same-kind apparently vector-like operands.

      \item \code{md5sum()} can be used to compute an MD5 hash of a raw
      vector of bytes by using the \code{bytes=} argument instead
      of \code{files=}. The two arguments are mutually exclusive.

      \item Added function \code{sha256sum()} in package \pkg{tools}
      analogous to \code{md5sum()} implementing the \abbr{SHA}-256 hashing
      algorithm.

      \item The \code{xtfrm()} method for class \code{"AsIs"} is now
      considerably faster thanks to a patch provided by \I{Ivan Krylov}.

      \item The \code{merge()} method for data frames will no longer
      convert row names used for indexing using \code{I()}, which will
      lead to faster execution in cases where \code{sort = TRUE} and
      \code{all.x} and/or \code{all.y} are set to \code{TRUE}.

      \item The \pkg{methods} package internal function
      \code{.requirePackage()} now calls \code{requireNamespace(p)}
      instead of \code{require(p)}, hence no longer adding packages to
      the \code{search()} path in cases methods or class definitions are
      needed.  Consequently, previous workflows relying on the old
      behaviour will have to be amended by adding corresponding
      \code{library(p)} calls.

      \item More \R-level messages use a common format containing
      \code{"character string"} for more consistency and less
      translation work.

      \item \code{available.packages()} and \code{install.packages()} get
      an optional switch \code{cache_user_dir}, somewhat experimentally.

      \item The \code{sunspot.month} data have been updated to Oct 2024;
      because of recalibration also historical numbers are changed, and we
      keep the previous data as \code{sunspot.m2014} for
      reproducibility.

      \item The \code{quartz()} device now supports alpha masks.  Thanks
      to \I{George Stagg}, \I{Gwynn Gebeyhu}, \I{Heather Turner}, and
      \I{Tomek Gieorgijewski}.

      \item The \code{print()} method for date-time objects (\code{POSIX.t})
      gets an optional \code{digits} argument for \emph{fractional}
      seconds, passed to improved \code{format.POSIXlt()}; consequently,
      \code{print(<date.time>, digits = n)} allows to print fractions of
      seconds.

      \item \code{install.packages()} and \code{download.packages()}
      download packages simultaneously using \code{libcurl}, significantly
      reducing download times when installing or downloading multiple
      packages.

      \item Status reporting in \code{download.file()} has been extended to
      report the outcome for individual files in simultaneous downloads.

      \item The Rd \verb{\link} macro now allows markup in the link text
      when the topic is given by the optional argument, e.g.,
      \samp{\link[=gamma]{\eqn{\Gamma(x)}}}.

      \item If \code{La_library()} is empty, \code{sessionInfo()} still
      reports \code{La_version()} when available.

      \item \code{seq.int(from, to, by, ....)} when \eqn{|by| = 1} now
      behaves as if \code{by} was omitted, and hence returns \code{from:to},
      possibly integer.

      \item \code{seq.Date(from, to, by, ....)} and \code{seq.POSIXt(..)}
      now also work when \code{from} is missing and sufficient further
      arguments are provided, thanks to \I{Michael Chirico}'s report, patch
      proposal in \PR{17672} and \sQuote{\I{R Dev Day}} contributions.

      The \code{Date} method also works for \code{seq(from, to)}, when
      \code{by} is missing and now defaults to \code{"1 days"}.

      It is now documented (and tested) that the \code{by} string may be
      \emph{abbreviated} in both \code{seq} methods.

      Both methods return or keep internal type \code{"integer"} more
      consistently now.  Also, \code{as.POSIXct({})} is internally integer.

      \item \code{duplicated()}, \code{unique()}, and \code{anyDuplicated()}
      now also work for class \code{expression} vectors.

      \item New function \code{use()} to use packages in R scripts with
      full control over what gets added to the search path.  (Actually
      already available since \R 4.4.0.)

      \item New connection type \code{zstdfile} for files compressed by
      \command{zstd} if \R{} was built with such support.  \code{file()}
      and \code{gzfile()} can automagically read such files.

      \item \code{memCompress()} and \code{memDecompress()} have options
      to use \command{zstd} compression if \R{} was built with support
      for it.

      \item There is some support for \command{zstd} compression of
      tarballs in \code{tar()} and \code{untar()}.  (This depends on OS
      support of \code{libzstd} or by \command{tar}.)

      \item \code{print(summary(<numbers>))} gets new optional argument
      \code{zdigits} to allow more flexible and consistent (double)
      rounding.  The current default \code{zdigits = 4L} is somewhat
      experimental.  Specifying both \code{digits = *, zdigits = *} allows
      behaviour independent of the global \code{digits} option.

      \item The \code{format()} method for \code{"difftime"} objects gets a
      new back compatible option \code{with.units}.

      \item A \code{summary()} method for \code{"difftime"} objects which
      prints nicely, similar to those for \code{"Date"} and \code{"POSIXct"}.

      \item \code{unique()}'s default method now also deals with
      \code{"difftime"} objects.

      \item \code{optimize(f, *)} when \code{f(x)} is not finite says
      more about the value in its \code{warning} message.  It no longer
      replaces \code{-Inf} by the largest \emph{positive} finite number.

      \item The documentation of \code{gamma()} and \code{is.numeric()}
      is more specific, thanks to the contributors of \PR{18677}.

      \item New dataset \code{gait} thanks to \I{Heather Turner} and
      \I{Ella Kaye}, used in examples.

      \item New datasets \code{penguins} and \code{penguins_raw} thanks to
      \I{Ella Kaye}, \I{Heather Turner}, and \I{Kristen Gorman}.

      \item \code{isSymmetric(<matrix>)} gains a new option \code{trans = "C"};
      when set to non-default, it tests for \dQuote{simple} symmetry of
      complex matrices.

      \item \code{model.frame()} produces more informative error messages
      in some cases when variables in the formula are not found, thanks to
      \I{Ben Bolker}'s \PR{18860}.

      \item \code{selectMethod(f, ..)} now keeps the function name if the
      function belongs to a group generic and the method is for the
      generic.
    }
  }

  \subsection{BLAS and LAPACK}{
    \itemize{
      \item The bundled BLAS and LAPACK sources have been updated to
      those shipped as part of January 2025's LAPACK 3.12.1.

      \item It is intended that this will be the last update to BLAS and
      LAPACK in the \R sources.  Those building \R from source are
      encouraged to use external BLAS and LAPACK and this will be required in
      future.

      \item This update was mainly bug fixes but contained a barely
      documented major change.  The set of BLAS routines had been
      unchanged since 1988, so throughout \R's history.  This update
      introduced new BLAS routines \code{dgemmtr} and \code{zgemmtr}
      which are now used by LAPACK routines.  This means that BLAS
      implementations are no longer interchangeable.

      \item To work around this, \R can be configured with option
      \option{--with-2025blas} which arranges for the 2025 BLAS
      additions to be compiled into \code{libRlapack} (the internal
      LAPACK, not built if an external LAPACK is used).

      This option allows the continuation of the practice of swapping
      the BLAS in use by \I{symlinking} \file{lib/libRblas.*}.  It has
      the disadvantage of using the reference BLAS version of the 2025
      routines whereas an enhanced BLAS might have an optimized version
      (\I{OpenBLAS} does as from version 0.3.29).

      \item Windows builds currently use the internal LAPACK and by
      default the internal BLAS: notes on how to swap the latter
      \emph{via} \file{Rblas.dll} are in file
      \file{src/extra/blas/Makefile.win}.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item A C23 compiler (if available) is now selected by default for
      compilation of \R and packages.  \R builds can opt out \emph{via} the
      \command{configure} flag \option{--without-C23}, unless the
      specified or default (usually \command{gcc}) compiler defaults to C23:
      \command{gcc}\sspace{}15 does.

      %% GCC 13 was released in 2023-04, LLVM 18 was 2024-03, 15 was 2022-09
      %% Apple clang 14.0.3 was too old: 15 is the earliest that can be
      %%   installed on macOS 15.3
      %% https://en.cppreference.com/w/c/23
      A C23 compiler is known to be selected with
      \command{gcc}\sspace{}13--15,
      \I{LLVM} \command{clang}\sspace{}18--20 (and 15 should),
      Apple \command{clang}\sspace{}15--17 and
      Intel\sspace{}2024.2--2025.0 (and 2022.2 should).

      Current binary distributions on macOS use Apple
      \command{clang}\sspace{}14 and so do not use C23.

      \item The minimum \command{autoconf} requirement for a maintainer
      build has been increased to \command{autoconf}\sspace{}2.72.

      \item Building the HTML and Info versions of the R manuals now
      requires \command{texi2any} from \I{Texinfo} 6.1 or later.

      \item Failures in building the manuals under \file{doc} now abort
      the installation, removing any file which caused the failure.

      \item Control of symbol visibility is now supported on macOS (the
      previous check only worked on ELF platforms).

      \item There is now support for installing the debug symbols for
      recommended packages on macOS: see \samp{REC_INSTALL_OPT} in file
      \file{config.site}.

      \item \command{configure} is now able to find an external
      \code{libintl} on macOS (the code from an older GNU \I{gettext}
      distribution failed to try linking with the macOS Core Foundation
      framework).
    }
  }

  \subsection{Installation on Windows}{
    \itemize{
      \item Both building \R and installing packages use the C compiler
      in C23 mode.

      \item R on Windows by default uses \command{pkg-config} for linking against
      external libraries.  This makes it easier to test R and packages with
      alternative toolchains (such as from \I{Msys2}, e.g., testing with \I{LLVM}
      and possibly with sanitizers). It also allows more significant \I{Rtools}
      updates within a single R minor release.

      \item The installer scripts for Windows have been tailored to
      \I{Rtools45}, an update of the \I{Rtools44} toolchain.  It is
      based on GCC 14.  The experimental support for 64-bit ARM
      (\code{aarch64}) CPUs is based on \I{LLVM} 19.  R-devel and \R
      4.5.x are no longer maintained to be \I{buildable} using
      \I{Rtools44} and it is advised to switch to \I{Rtools45}.
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item \code{is.R()} is defunct.  Environment variable
      \env{_R_DEPRECATED_IS_R_} no longer has any effect.

      \item Deprecated (for more than 9 years!) functions
      \code{linearizeMlist}, \code{listFromMlist}, and \code{showMlist} and
      the \code{"MethodsList"} class for S4 method handling were removed
      from package \pkg{methods}.
      Deprecated functions \code{balanceMethodsList}, \code{emptyMethodsList},
      \code{inheritedSubMethodLists}, \code{insertMethod},
      \code{insertMethodInEmptyList}, \code{makeMethodsList},
      \code{mergeMethods}, \code{MethodsList}, \code{MethodsListSelect}, and
      \code{SignatureMethod} were made defunct, as were the
      \code{"MethodsList"} branches of functions \code{assignMethodsMetaData},
      \code{finalDefaultMethod}, and \code{MethodAddCoerce}.

      \item \code{getMethods(*, table = TRUE)} is deprecated.

      \item Building with the bundled (and old) version of
      \code{libintl} is deprecated and now gives a \command{configure}
      warning.  This should be selected only if neither the OS's
      \code{libc} (as on GNU Linux) nor an external \code{libintl}
      library provide suitable functions.

      Instead install \code{libintl} from a recent version of GNU
      \I{gettext} (available for macOS) or use \command{configure} option
      \option{--disable-nls}.

      The ability to use the bundled version may be removed as soon as
      \R\sspace{}4.5.1.

      \item The deprecated \code{xfig()} graphics device has been removed.
    }
  }

  \subsection{Package Installation}{
    \itemize{
      \item Packages are now installed using C23 where supported by the
      OS and \R build.

      Packages using \R's compiler settings can ask \strong{not} to use C23
      \emph{via} including \code{USE_C17} in \code{SystemRequirements}
      or can be installed by \command{R CMD INSTALL --use-C17}.
      (Some packages ignore these settings in their \command{configure}
      script or when compiling in sub-directories of \file{src}, as
      will those using a \file{src/Makefile}.)

      \item Source installs now report the package version in the log.

      \item There is preliminary support for C++26 with GCC \eqn{>=} 14, Apple
      \command{clang++} \eqn{>=} 16 and \I{LLVM} \command{clang++} \eqn{>=} 17.
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item The non-API and hidden entry points \code{Rf_setIVector},
      \code{Rf_setRVector} and \code{Rf_setSVector} have been removed.

      \item The internal code for changing the parent of an environment
      now signals an error if the new parent is not an environment or if
      the change would create a cycle in the parent chain.

      \item \code{SET_TYPEOF} now signals an error unless the old and
      new types have compatible memory structure and content. Use of
      \code{SET_TYPE} in package C code should be avoided and may be
      deprecated in the near future. It is better to allocate an object
      of the desired type in the first place.

      \item The set of LAPACK (double and complex) routines declared in
      the headers \file{R_ext/Lapack.h} and \file{R_ext/Applic.h} has
      been extended, mostly to routines actually in use by packages.

      \item Memory allocation messages now use the (non-SI notation)
      \code{"Mb"}, \code{"Gb"} , \dots, and \code{"Mbytes"} strings as
      \emph{arguments} instead of as part of the (translatable format)
      string.  This is one step for \PR{18297}; from \I{Henrik Bengtsson}.

      \item Header \file{R_ext/Constants.h} (included by \file{R.h}) now
      always includes header \file{float.h} or \file{cfloat} for
      constants such as \code{DBL_MAX}.

      \item Strict R headers are now the default.  This removes the
      legacy definitions of \code{PI}, \code{Calloc}, \code{Realloc} and
      \code{Free}: use \code{M_PI}, \code{R_Calloc}, \code{R_Realloc} or
      \code{R_Free} instead.

      \item The deprecated and seemingly never-used S-compatibility
      macros \code{F77_COM} and \code{F77_COMDECL} have been removed
      from header \file{R_ext/RS.h}.

      \item The \code{enum} \code{Rboolean} defined in header
      \file{R_ext/Boolean.h} now has a fixed underlying type of
      \code{int} on platforms whose C compiler supports this.

      This is a C23 feature (taken from C++11) and also supported in all
      C standards by some versions of \code{clang} (from \I{LLVM} and
      Apple) and (with a warning when using \option{-pedantic}) by GCC
      when in C17 mode.

      A fair amount of code has assumed this: it may be changed to a
      smaller type in future.  In particular, as standard compilers do
      not check the validity of assignment to an \code{enum}, it has been
      possible to assign \code{NA_INTEGER} to an \code{Rboolean}
      variable, coerce it to \code{int} and recover the value.
      %% There are claims that the Green Hills compiler can.
      %% In C++ rhis was confirmed as undefined behaviour in
      %% https://cplusplus.github.io/CWG/issues/1766.html
      %% Some versions of UBSAN can check it with -fsanitize=enum

      If there were a platform which used an underlying type of a
      different size this would be an \abbr{ABI}-breaking change (but we are
      unaware of any such platform).

      \item Header \file{R_ext/Boolean.h} now ensures that a \code{bool}
      type is available either as a keyword (C23 and C++) or by
      including the C99 header \file{stdbool.h}.  This is being used
      internally in \R to replace \code{Rboolean} by \code{bool}.

      \item There are new functions \code{asRboolean} and
      \code{asBool}, variants of \code{asLogical} more suited to
      converting logical arguments to \code{Rboolean} or to
      \code{bool}. They require a length-one input and throw an error if
      that evaluates to \code{NA}.

      \item Header \file{R_exts/Error.h} now ensures that
      \code{Rf_error} and similar are given a \code{noreturn}
      attribute when used from C++ under all compilers.

      \item Header \file{R_exts/Utils.h} no longer contains a
      declaration for \code{F77_SUB(interv)}.  This is intended to be
      called from Fortran and was wrongly declared: \code{LOGICAL} in
      Fortran corresponds to \code{int *} not \code{Rboolean *}.

      \item Defining \code{R_INCLUDE_BOOLEAN_H} to \code{0} before
      including headers \file{R.h} or \file{Rinternals.h} (or any other
      header which includes \file{R_ext/Boolean.h}) stops the inclusion
      of header \code{R_ext/Boolean.h} which `defines' constants
      \code{TRUE}, \code{FALSE}, \code{true}, \code{false} and the type
      \code{bool} which some package maintainers wish to avoid.

      Note that the last three are keywords in C23 and C++11 so cannot be
      avoided entirely.  However, with commonly-used compilers they can be
      masked by a macro of the same name, often with a warning.
    }
  }

  \subsection{C-Level API}{
    \itemize{
      \item The \sQuote{Writing R Extensions} \I{Texinfo} source now
      contains very experimental annotations for more clearly
      identifying the API status of C entry points. These annotations
      are used to produce indices for API, experimental API, and
      embedded API entry points in the rendered versions.  This is very
      preliminary and may be dropped if a better approach emerges.

      Also for Fortran-callable entry points which are part of the API.

      \item \sQuote{Writing R Extensions} has a new section
      \sQuote{Moving into C API compliance} to help package authors move
      away from using non-API endpoints. This section will continue to
      be updated as work on clarifying and tightening the C API
      continues.

      \item New API function \code{R_mkClosure}. This checks that its
      arguments are valid and should be used instead of
      \code{allocSExp(CLOSXP} followed by \code{SET_FORMALS},
      \code{SET_BODY}, and \code{SET_CLOENV}.

      \item New API functions \code{R_ClosureFormals},
      \code{R_ClosureBody}, and \code{R_ClosureEnv} for extracting
      closure components.  The existing functions \code{R_ClosureExpr}
      and \code{R_BytecodeExpr} have also been added to the API.

      \item New API function \code{R_ParentEnv} corresponding to \R's
      \code{parent.env()}.

      \item Further non-API entry points have been added to those reported
      by \command{R CMD check}: \code{COMPLEX0}, \code{ddfind},
      \code{DDVAL}, \code{ENSURE_NAMEDMAX}, \code{ENVFLAGS},
      \code{FRAME}, \code{HASHTAB}, \code{INTERNAL}, \code{IS_ASCII},
      \code{IS_UTF8}, \code{LEVELS}, \code{NAMED}, \code{PRSEEN},
      \code{RDEBUG}, \code{REAL0}, \code{Rf_findVarInFrame3},
      \code{SET_BODY}, \code{SET_CLOENV}, \code{SET_FORMALS},
      \code{SET_PRSEEN}, \code{SET_RDEBUG}, \code{STRING_PTR},
      \code{SYMVALUE}, and \code{VECTOR_PTR}. Any declarations for these
      in public header files will be removed in the near future, and
      they will be hidden where possible.

      \item Some \command{R CMD check} \samp{NOTE}s on the use of
      non-API entry points have been upgraded to \samp{WARNING}s in
      preparation for removing declarations and, where possible, hiding
      these entry points.

      \item Additional non-API entry points have been added to those
      reported by \command{R CMD check}: \code{IS_LONG_VEC},
      \code{PRCODE}, \code{PRENV}, \code{PRVALUE}, \code{R_nchar},
      \code{Rf_NonNullStringMatch}, \code{R_shallow_duplicate_attr},
      \code{Rf_StringBlank}, \code{SET_TYPEOF}, \code{TRUELENGTH},
      \code{XLENGTH_EX}, and \code{XTRUELENGTH}.

      \item Enable defining \env{R_NO_REMAP_RMATH} and calling
      \code{Rf_*()} as has been documented in
      \sQuote{Writing R Extensions} for a while, fixing \PR{18800}
      thanks to \I{Mikael Jagan} and \I{Suharto Anggono}.

      \item \code{R_GetCurrentSrcref(skip)} now skips calls rather
      than \code{srcref}s, consistent with counting items in the
      \code{traceback()} display.  If \code{skip == NA_INTEGER},
      it searches for the first \code{srcref}, starting at
      the current evaluation state and proceeding through the
      call stack; otherwise, it returns the \code{srcref}
      of the requested entry from the call stack.
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD INSTALL} (and hence \command{check}) now
      compile C++ code with \code{-DR_NO_REMAP}.

      \sQuote{Writing R Extensions} has been revised to describe the remapped
      entry points, for with the \code{Rf_} prefix remains optional when
      used from C code (but is recommended for new C code).

      \item \command{R CMD check --as-cran} notes bad parts in the
      \file{DESCRIPTION} file's URL fields.

      \item \command{R CMD check} now reports more warnings on
      long-deprecated/obsolete Fortran features reported by
      \command{gfortran -Wall}.  For hints on how to modernize these,
      see
      \url{https://fortranwiki.org/fortran/show/Modernizing+Old+Fortran}.

      \item Since almost all supported \R versions now use UTF-8,
      \command{R CMD check} no longer by default reports on marked
      UTF-8 or Latin-1 strings in character data.  Set environment
      variable \env{_R_CHECK_PACKAGE_DATASETS_SUPPRESS_NOTES_} to a
      false value for the previous behaviour.

      \item \code{tools::checkDocFiles()} notes more cases of
      usage documentation without corresponding \verb{\alias}.

      \item \command{R CMD check} with a true value for environment variable
      \env{_R_CHECK_BASHISMS_} checks more thoroughly, including for
      \command{bash} scripts and bashisms in components of
      \command{autoconf}-generated \command{configure} scripts.

      \item \command{R CMD check} gains option \option{--run-demo} to
      check demo scripts analogously to tests.  This includes a check
      for undeclared package dependencies: it can also be enabled
      separately by setting the environment variable
      \env{_R_CHECK_PACKAGES_USED_IN_DEMO_} to a true value
      (as done by \command{R CMD check --as-cran}).

      \item \command{R CMD build} now supports \option{--compression=zstd}
      on platforms with sufficient support for \command{zstd}.

      \item \code{tools::texi2pdf(..., texinputs=\var{paths})} now
      \emph{pre}pends the specified \var{paths} to \env{TEXINPUTS}.
      When building \R itself (\file{doc/NEWS.pdf} and base vignettes)
      or package manuals using \command{R CMD Rd2pdf}, it is ensured
      that this \R's \file{Rd.sty} takes precedence over any other
      (incompatible) versions in default \I{\dQuote{texmf trees}}.

      \item \code{tools::Rd2latex()} no longer outputs an
      \samp{\\inputencoding{utf8}} line by default;
      such a declaration is obsolete since \LaTeX 2018-04-01.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{update_pkg_po()} now copies \file{.mo} files to the
      \pkg{translation} package even if a \file{DESCRIPTION} file
      exists, thanks to \I{Michael Chirico} fixing \PR{18694}.

      \item Auto-generated \code{citation()} entries no longer include
      (additional) URLs in the \samp{note} field (\PR{18547}).

      \item \code{as.data.frame.list()} gets a new option \code{new.names}
      and now preserves \code{NA} names, thus fixing the \code{format()}
      method for data frames, and also bug \PR{18745}.
      \I{Relatedly}, the \code{format()} method gets an option \code{cut.names}.

      \item \code{stem()} formats correctly also in cases where rounding
      up, e.g., from 9.96 to 10 needs more digits; thanks to \I{Ella
      Kaye} and \I{Kelly Bodwin}, fixing \PR{8934} during \sQuote{\I{R
      Dev Day}} at \I{useR!2024}.

      Additionally, \code{stem(x)} now works normally also when
      \code{length(x) == 1}.

      \item \pkg{tools}' \code{toTitleCase()} now works better, fixing
      \PR{18674}, thanks to \I{Shannon Pileggi}, \I{Sarah Zeller},
      \I{Reiko Okamoto}, and \I{Hugo Gruson}'s \sQuote{\I{R Dev Day}}
      effort.

      \item Printing matrices (typically with many rows and or columns)
      now also omits columns when desirable according to option
      \code{max.print}, or argument \code{max}, respectively.
      This is primarily the work of \I{Lorena Abad},
      \I{Ekaterina Akimova}, \I{Hanne Oberman}, \I{Abhishek Ulayil},
      and \I{Lionel Henry} at the \sQuote{\I{R Dev Day}}, thus fixing
      \PR{15027}.

      \item \code{Sys.setLanguage()} now warns about \emph{some}
      failures to change the language.

      \item Printing \code{ls.str()} now shows \code{"<missing>"} even when
      \R's language setting is not English.

      \item \code{xyTable()} now handles and reports \code{NA}s
      fixing \PR{18654}.
      Thanks to \I{Heather Turner} and \I{Zhian Kamvar} for report and patch.

      \item \code{as(*, "raw")} now works as documented, thanks to \I{Mikael
      Jagan}'s \PR{18795}.

      \item Informational messages of e.g., \code{print(1:1e4, max=1000)},
      now correctly mention \code{max} in addition to
      \code{getOption("max.print")}.

      \item \code{rowSums(A, dims = dd)}, \code{colMeans(..)}, etc, give a
      more helpful error message when \code{dd} is not of length one,
      thanks to \I{Michael Chirico}'s \PR{18811}.

      \item \code{seq.Date()} no longer explicitly coerces results from
      integer to double, analogously with \code{seq.default()},
      \code{seq.int()} and \code{seq.POSIXt()}, resolving a \emph{modified}
      \PR{18782}.

      \item \code{axisTicks(usr, ...)} documentation clarification for
      \code{log = TRUE}, fixing bug \PR{18821} thanks to \I{Duncan Murdoch}.

      \item \code{debug()} and \code{debugonce(fun)} now also accept a
      string \code{fun} when it names an S4 generic, fixing \PR{18822}
      thanks to \I{Mikael Jagan}.

      \item \code{debugonce(<S4-simple-body>, signature=*)} now works
      correctly when \dQuote{called twice}, fixing \PR{18824} thanks to
      \I{Mikael Jagan}.

      \item \code{format(dtime, digits=* / format=*)} is more consistent
      when the \code{POSIXt} date-time object \code{dtime} has fractional
      (non integer) seconds.  Fixes \PR{17350}, thanks to new contributions
      by \I{LatinR}'s \sQuote{\I{R Dev Day}} participants, \I{Heather
      Turner} and \I{Dirk Eddelbuettel}; also fixes more cases, notably
      when \code{format} contains \samp{\%OS<nodigit>}.

      \item \code{options(scipen = NULL)} and other invalid values now
      signal an error instead of invalidating ops relying on a finite
      integer value.  Values outside the range -9 .. 9999 are now warned
      about and set to a boundary or to the default \code{0}, e.g., in
      case of an \code{NA}.  This also fixes \PR{16322}.

      \item \code{cbind()} could segfault with \code{NULL} inputs.
      (Seen when \R was built with \command{gcc-14}, \abbr{LTO} and C99
      inlining semantics.)

      \item Fix segfault on \code{quartz()} from \code{grid.glyph()}
      call with \code{glyphInfo()} that describes non-existent font
      (\PR{18784}).  Thanks to \I{Tomek Gieorgijewski}.

      \item \code{format()} etc, using \code{decimal.mark = s}, by default
      getting \code{s <- getOption("OutDec")}, signals a warning (to become
      an error in the future) when \code{s} is not a string with exactly
      one character.

      \item When \code{s <- getOption("OutDec")} is not a string of one
      character, a warning is signalled now whenever it is used in internal
      C code, notably when calling the default methods of \code{format()}.

      \item \code{pwilcox()} and \code{qwilcox()} now check for user
      interrupt less frequently.

      \item \code{summary(<stl>)} (which prints directly) finally gets the
      same \code{digits} default as the formatting printing of default
      \code{summary()} method results, and it is documented explicitly.

      \item \code{options(show.error.locations = TRUE)} once
      again shows the most recent known location when an
      error is reported.  Setting its value to \code{"bottom"}
      is no longer supported.  Numerical values are converted
      to logical.

      \item C API function \code{R_GetCurrentSrcref(skip)} now
      returns \code{srcref} entries correctly.  (Note that there
      is also a change to the interpretation of \code{skip};
      see the C-Level API entry above.)

      \item \code{tools::Rd2latex()} now removes leading and trailing
      spaces from \verb{\alias} entries as documented, fixing indexing
      and linking hiccups in some PDF manuals.

      \item \command{R CMD Rd2pdf} can now render the package manual from
      a \option{--latex} installation also when the help contains figures.

      \item The argument of \code{as.environment()} is now named \code{x},
      not \code{object}, as was always documented and shown when
      printing it; thanks to \I{Gael Millot}'s \PR{18849}.

      \item When \command{R CMD check} aims at getting the time+date from a
      world clock, it is more robust against unexpected non-error results,
      thanks to \I{Michael Chirico}'s \PR{18852}.

      \item The \code{tools::parseLatex()} parser made several parsing
      errors (\PR{18855}).

      \item Error messages produced by \code{tools::parseLatex()} are
      now more readable (\PR{18855}).

      \item \command{R CMD build <pkg>} excludes more file patterns
      when it tars the <pkg> directory, fixing both \PR{18432} and
      \PR{18434}, for \command{vim} and \command{GNU Global}
      \command{emacs} users, thanks to \I{Dirk Eddelbuettel}'s patch.

      \item \code{quantile()}'s default method gets an option \code{fuzz}
      to protect against floating point inaccuracy before rounding, thus
      fixing \PR{15811} and, \I{en passant}, \PR{17683}.

      \item Printing arrays now also omits columns, rows and slices when
      desirable according to option \code{max.print}, or argument
      \code{max}, respectively, addressing most of the remaining part of
      \PR{15027}, thanks to \I{Sherry Zhang}'s patch.

      \item \code{drop.terms(y ~ w, 1)} and similar now work, thanks to
      \I{Benjamin Sommer}'s report in \PR{18861} and collaboration with
      \I{Heather Turner} improving \code{reformulate()}.

      \item Many arguments which should be length-1 logical are checked
      more thoroughly.  The most commonly seen errors are in
      \code{unlink(, recursive)}, \code{tempdir()} and the \code{na.rm}
      arguments of \code{max()}, \code{min()}, \code{sum()}, \dots.

      \code{grep()}, \code{strsplit()} and similar took
      non-\code{TRUE}/\code{FALSE}
      values of their logical arguments as \code{FALSE}, but these were
      almost always mismatches to unnamed arguments and are now reported
      as \code{NA}.

      \item \code{vignette("reshape")} is now also available on Windows.

      \item \code{trace(coerce, ..)} now works correctly, fixing \PR{18823}
      thanks to \I{Mikael Jagan}.

      \item \command{R CMD check} now also reports bad symbols in
      package shared objects linked in from local static libraries
      (\PR{18789}).

      \item \code{factanal()} now works correctly also, e.g., for
      \pkg{GPArotation}, \code{oblimin()} rotations, fixing \PR{18417},
      thanks to \I{Coen Bernaards} and others.

      \item Setting \code{attributes} on primitive functions is
      deprecated now and already an error in the development version of \R.
      Changing the \code{environment} of a primitive does no longer happen
      and signals a warning.
    }
  }
}

\section{\Rlogo Changes in R 4.4.3}{
  \subsection{Installation}{
    \itemize{
      \item \R can be installed using C23 (for example with
      \option{-std=gnu23} or \option{-std=gnu2x}) with recent compilers
      including \command{gcc} 12--14, Apple \command{clang} 15--16, \I{LLVM}
      \command{clang} 17--20 and Intel \command{icx} 2024.2.

      It can be installed with the upcoming (at the time of writing)
      \command{gcc} 15, which defaults to C23.
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item The functions \code{R_strtod} and \code{R_atof} now allow
      hexadecimal constants without an exponent, for compatibility with
      their C99 versions (\PR{18805}).
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD build} and \command{R CMD check} now allow
      reference output for demo scripts (\file{demo/\var{demo}.Rout.save}
      files) to be shipped with the package, as proposed by
      \I{Torsten Hothorn} in \PR{18816}.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{kappa(A, exact=TRUE)} for singular \code{A} returns
      \code{Inf} more generally, fixing \PR{18817} reported by
      \I{Mikael Jagan}.

      \item Fixed URLs of the sun spots (\code{sunspot.month} etc) data
      sets and mention future changes due to recalibration.

      \item The parser now accepts hexadecimal constants with a decimal
      point without an exponent (taken as \code{p0}) as documented in
      \code{?NumericConstants} (\PR{18819}).

      \item \code{rbind()} now works correctly when inputs include a raw
      vector and a logical, integer or double vector -- previously the
      inclusion of the latter was garbled.

      \item \code{smooth.spline()} checks validity of its arguments
      \code{df.offset} and \code{penalty}: it could segfault if they
      were \code{NULL}.

      \item \code{isGeneric(<primitive>, fdef=*, getName=TRUE)} now also
      returns the name instead of just \code{TRUE}, fixing \PR{18829}
      reported by \I{Mikael Jagan}.

      \item \code{isGeneric(fdef = print)} now works, fixing \PR{18369}
      thanks to \I{Mikael Jagan}.

      \item \code{sort(x, method = "qsort")} made illegal accesses when
      \code{x} has length 0.

      \item \code{dir.create()} is protected against being passed an
      empty string as its \code{path} argument.

      \item Silent integer overflow could occur in the
      \sQuote{exact} computations for \code{fisher.test()} for
      unrealistic inputs: this is now an error.

      \item Some invalid C-level memory accesses are avoided for
      \code{loglin(, margin = NULL)}.

      \code{loglin(, param = TRUE)} no longer gives an error in corner
      cases such as a one-dimensional input.

      \item \code{dev.capabilities() $ events} now reports \code{"Idle"} if
      the device provides it, fixing \PR{18836}, thanks to \I{Trevor Davis}.

      \item \code{arima(.., seasonal = <wrong-vector>)} correctly errors
      now, ditto for \code{arima0()}, thanks to \I{Norbert Kuder}'s report
      on the R-devel list.

      \item \code{binomial(<link>)$linkinv(eta)} and \code{.. $mu.eta(eta)}
      now also work for \code{"logit"} link when \code{is.integer(eta)}.

      \item \code{as.roman(x)} now should work platform independently,
      also for, e.g., \code{x = "IIIII"} (= V) and \code{x = "IIIIII"}
      (= VI).

      \item \command{R CMD Rd2pdf} works again on an installed package
      directory containing \LaTeX help (from option \option{--latex}),
      thanks to a report by \I{Peter Ruckdeschel}.
    }
  }
}

\section{\Rlogo Changes in R 4.4.2}{
  \subsection{C-Level Facilities}{
    \itemize{
      \item The S-compatibility macros \code{F77_COM} and
      \code{F77_COMDECL} defined in header \file{R_ext/RS.h} are
      deprecated and will be removed shortly.  We could find no record
      of their use.
    }
  }
  \subsection{Bug Fixes}{
    \itemize{
      \item \I{Mathlib} function \code{lgammacor(x)} no longer warns about
      underflow to zero for large \code{x}.

      \item Text widths and heights were incorrectly reported by the
      Quartz device if the drawing context didn't exist yet (typically
      when drawing off-screen to a window that is yet to appear, see
      \PR{18591}).

      \item The Quartz device could segfault in cases where paths with
      spaces are used in the new glyph drawing API.
      Thanks to \I{Tomek Gieorgijewski} (\PR{18758}).

      \item On macOS in R CRAN builds, it is again possible to read
      little-endian UTF-16 text with a \abbr{BOM} from a connection using
      \code{encoding="UTF-16"}.  Users building R from source should avoid
      using the system \code{libiconv} in macOS 14.1 and later.

      \item \pkg{methods}' internal \code{.requirePackage()} now re-enables
      primitive method dispatch when needed; thanks to \I{Ivan Krylov}
      for demystifying CRAN package check failures on the R-devel mailing
      list.
    }
  }
}

\section{\Rlogo Changes in R 4.4.1}{
  \subsection{C-Level Facilities}{
    \itemize{
      \item Functions \code{R_atof} and \code{R_strtod} declared in
      header \file{R_ext/Utils.h} are now documented in
      \sQuote{Writing R Extensions} and so formally part of the API.

      \item The non-API entry points \code{Rf_setSVector},
      \code{Rf_StringFalse}, \code{Rf_StringTrue} and
      \code{Rf_isBlankString} have been added to those reported by
      \command{R CMD check}.

      \item The new function \code{Rf_allocLang} is now available. This
      provides an alternative to the idiom of calling
      \code{Rf_allocList} followed by \code{SET_TYPEOF}.
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} now reports as warnings  what
      \command{gfortran} calls \sQuote{Fortran 2018 deleted features}, all
      of which have long been marked as \sQuote{obsolescent} and some of
      which were deleted in Fortran 2008 or earlier.  Fortran compilers
      are no longer required to support these.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{as.numeric()}, \code{scan()}, \code{type.convert()}
      and other places which use the internal C function \code{R_strtod} now
      require a \emph{non-empty} digit sequence in a decimal or binary
      exponent.  This aligns with the C/POSIX standard for \code{strtod} and
      with \code{?NumericConstants}.

      \item \code{as.data.frame(m, make.names=NA)} now works correctly for
      a matrix \code{m} with \code{NA}'s in row names.

      \item The error message from \code{<POSIXlt>[["hour"]]} and similar
      now mentions \code{*[[, "hour"]]}, as wished for in \PR{17409} and
      proposed by \I{Michael Chirico}.

      \item \code{qbinom()} and potentially \code{qpois()}, \code{qnbinom()},
      no longer sometimes fail accurate inversion (of \code{pbinom()},
      etc), thanks to Christopher Chang's report and patch in \PR{18711}.

      \item The internal help server on Windows can again serve requests
      sent in quick succession, fixing a regression in \R 4.4.0.

      \item \code{debugcall(\var{S3Generic}())} now also works when a
      corresponding S4-generic version is in the \pkg{methods} cache
      (\PR{18143}).

      \item Package \pkg{tools}' \code{toTitleCase(ch0)} now returns
      \code{character(0)} when \code{ch0} is of zero length; fixing
      \PR{18724}, reported by David Hugh Jones.

      \item \command{R CMD check} is no longer broken (without a check
      result and no explanation in \file{00check.log}) for a package
      which declares an invalid \code{VignetteBuilder} in
      \file{DESCRIPTION} but has no vignettes.
    }
  }
}

\section{\Rlogo Changes in R 4.4.0}{
  \subsection{Significant User-Visible Changes}{
    \itemize{
      \item Startup banners, \command{R --version}, \code{sessionInfo()}
      and \command{R CMD check} no longer report \code{(64-bit)} as part of
      the platform as this is almost universal -- the increasingly rare
      32-bit platforms will still report \code{(32-bit)}.

      On Windows, ditto for window titles.

      \item \code{is.atomic(NULL)} now returns \code{FALSE}, as \code{NULL}
      is not an atomic vector.  Strict back-compatibility would
      replace \code{is.atomic(foo)} by \code{(is.null(foo) || is.atomic(foo))}
      but should happen only sparingly.
    }
  }

  \subsection{New Features}{
    \itemize{
      \item The \code{confint()} methods for \code{"glm"} and
      \code{"nls"} objects have been copied to the \pkg{stats}
      package.  Previously, they were stubs which called versions in
      package \pkg{MASS}. The \pkg{MASS} namespace is no longer loaded
      if you invoke (say) \code{confint(glmfit)}.  Further, the
      \code{"glm"} method for \code{profile()} and the \code{plot()}
      and \code{pairs()} methods for class \code{"profile"} have been
      copied from \pkg{MASS} to \pkg{stats}.  (\code{profile.nls()} and
      \code{plot.profile.nls()} were already in \pkg{stats}.)

      \item The \code{confint()} and \code{profile} methods for
      \code{"glm"} objects have gained a possibility to do profiling
      based on the \I{Rao} Score statistic in addition to the default
      Likelihood Ratio. This is controlled by a new \code{test =}
      argument.

      \item The \code{pairs()} method for \code{"profile"} objects has
      been extended with a \code{which =} argument to allow plotting only
      a subset of the parameters.

      \item The \code{"glm"} method for \code{anova()} computes test
      statistics and p-values by default, using a chi-squared test or
      an F test depending on whether the dispersion is fixed or
      free.  Test statistics can be suppressed by giving argument
      \code{test} a false logical value.

      \item In \code{setRepositories()} the repositories can be set
      using their names via \code{name =} instead of index \code{ind =}.

      \item \code{methods()} and \code{.S3methods()} gain a
      \code{all.names} option for the (rare) case where functions starting
      with a \samp{.} should be included.

      \item Serializations can now be interrupted (e.g., by \kbd{Ctrl-C} on
      a Unix-alike) if they take too long, e.g., from \code{save.image()},
      thanks to suggestions by \I{Ivan Krylov} and others on R-devel.

      \item New startup option \option{--max-connections} to set the
      maximum number of simultaneous connections for the session.
      Defaults to 128 as before: allowed values up to 4096 (but resource
      limits may in practice restrict to smaller values).

      \item \R on Windows (since Windows 10 2004) now uses the new Segment
      Heap allocator. This may improve performance of some memory-intensive
      applications.

      \item When \R packages are built, typically by \command{R CMD build <pkg>},
      the new \command{--user=<build_user>} option overrides the
      (internally determined) user name, currently \code{Sys.info()["user"]}
      or \env{LOGNAME}.  This is a (modified) fulfillment of Will Landau's
      suggestion in \PR{17530}.

      \item \code{tools::testInstalledBasic()} gets new optional
      arguments \code{outDir} and \code{testSrcdir}, e.g., allowing to use
      it in a \code{\var{builddir} != \var{srcdir}} setup, and in standard
      \dQuote{binary} Windows installation \bold{if} a source \file{tests/}
      folder is present.

      \item \code{range(<DT_with_Inf>, finite = TRUE)} now work for objects
      of class \code{"Date"}, \code{"POSIXct"}, and \code{"POSIXlt"} with
      infinite entries, analogously to \code{range.default()}, as proposed
      by Davis Vaughan on R-devel.  Other \code{range()}-methods can make
      use of new function \code{.rangeNum()}.

      \item New \code{.internalGenerics} object complementing
      \code{.S3PrimitiveGenerics}, for documentation and low-level
      book-keeping.

      \item \code{grid()} now invisibly returns the x- and y- coordinates
      at which the grid-lines were drawn.

      \item \code{norm(., type)} now also works for complex matrices.

      \item \code{kappa(., exact = TRUE, norm = *)} now works for all
      norms and also for complex matrices.  In symmetric / triangular
      cases, the  new argument \code{uplo = "U" | "L"} allows the
      upper or lower triangular part to be specified.

      \item \code{memDecompress(type = "unknown")} recognizes compression
      in the default \sQuote{\I{zlib}} format as used by
      \code{memCompress(type = "gzip")}.

      \item \code{memCompress()} and \code{memDecompress()} will use the
      \code{libdeflate} library
      (\url{https://github.com/ebiggers/libdeflate}) if installed.  This
      uses the same type of compression for \code{type = "gzip"} but is
      1.5-2x faster than the system \code{libz} library on some
      common platforms: the speed-up may depend on the library version.
      %% libdeflate 1.13 claims significant improvements in
      %% decompression speed.

      \item \code{diff()} for objects of class \code{"Date"},
      \code{"POSIXct"}, and \code{"POSIXlt"} accepts a \code{units}
      argument passed via \code{...}.

      \item Dynamic help now does a much better job of rendering package
      \file{DESCRIPTION} metadata.

      \item \code{Rprof()} gains an \code{event} argument and support
      for elapsed (real) time profiling on Unix (\PR{18076}).

      \item \code{filled.contour()} gains a \code{key.border} argument.

      \item \code{tools::update_pkg_po()} gets arguments \code{pot_make}
      and \code{mo_make} for \emph{not} re-making the corresponding
      files, and additionally a \code{verbose} argument.

      \item Hexadecimal string colour specifications are now accepted
      in short form, so, for example, we can use \code{"#123"}, which is
      equivalent to \code{"#112233"}.

      Thanks to \I{MikeFC} for the original idea and \I{Ella Kaye},
      \I{Malcolm Barrett}, \I{George Stagg}, and \I{Hanne Oberman} for
      the patch.

      \item Plain-text help shows \verb{\var} markup by angle brackets.

      \item The new experimental primitive function \code{declare()} is
      intended to eventually allow information about \R{} code to be
      communicated to the interpreter, compiler, and code analysis
      tools. The syntax for declarations is still being developed.

      \item Functions \code{psmirnov()}, \code{qsmirnov()} and
      \code{rsmirnov()} in package \pkg{stats} have had argument
      \code{two.sided} renamed to \code{alternative}, to take into
      account that the permutation distributions of the one-sided
      statistics can be different in the case of ties.  Consequence of
      \PR{18582}.

      \item \code{sort()} is now an implicit S4 generic in \pkg{methods}.

      \item Formatting and printing, \code{format(z), print(z)}, of
      complex vectors \code{z} no longer zap relatively small real or
      imaginary parts to zero, fixing \PR{16752}.  This is an API
      change, as it was documented previously to round real and
      imaginary parts together on purpose, producing nicer looking
      output.  As mentioned, e.g.\sspace{}in the PR, this change is
      compatible with many other \dQuote{\R-like} programming
      environments.

      We have simplified the internal code and now basically format the
      real and imaginary parts independently of each other.

      \item New experimental functions \code{Tailcall()} and
      \code{Exec()} to support writing stack-space-efficient recursive
      functions.

      \item Where characters are attempted to be plotted by
      \code{pdf()}, \code{postscript()} and \code{xfig()} which are
      not in the selected 8-bit character set (most often Latin-1) and
      the \R session is using a UTF-8 locale, the warning messages will
      show the UTF-8 character rather than its bytes and one dot will be
      substituted per character rather than per byte.  (Platforms whose
      \code{iconv()} does transliteration silently plot the
      transliteration.)

      In a UTF-8 locale some transliterations are now done with a
      warning (e.g., dashes and Unicode minus to hyphen, ligatures are
      expanded, \I{permille} (\samp{‰}) is replaced by \samp{o/oo}),
      although the OS may have got there first.  These are warnings as
      they will continue to be replaced by dots in earlier versions of
      \R.

      \item The matrix multiplication functions \code{crossprod()} and
      \code{tcrossprod()} are now also primitive and S3 generic, as
      \code{\%*\%} had become in \R 4.3.0.

      \item \code{source()} and \code{example()} have a new optional
      argument \code{catch.aborts} which allows continued evaluation of
      the \R code after an error.

      \item The non-Quartz \code{tiff()} devices allow additional types
      of compression if supported by the platform's \samp{libtiff} library.

      \item The list of base and recommended package names is now provided by
      \code{tools::standard_package_names()}.

      \item \code{cairo_pdf()} and \code{cairo_ps()} default to
      \code{onefile = TRUE} to closer match \code{pdf()} and
      \code{postscript()}.

      \item New option \code{catch.script.errors} provides a documented way
      to catch errors and then continue in non-interactive use.

      \item \code{L \%||\% R} newly in \pkg{base} is an expressive idiom
      for the phrases \code{if(!is.null(L)) L else R} or
      \code{if(is.null(L)) R else L}.

      \item The return value from \code{warnings()} now always inherits
      from \code{"warnings"} as documented, now also in the case of no
      warnings where it previously returned \code{NULL}.

      \item \code{as.complex("1i")} now returns \code{0 + 1i} instead of
      \code{NA} with a warning.

      \item \code{z <- c(NA, 1i)} now keeps the imaginary part
      \code{Im(z[1]) == 0}, no longer coercing to \code{NA_complex_}.
      Similarly, \code{cumsum(z)} correctly sums real and imaginary parts
      separately, i.e., without \dQuote{crosstalk} in case of \code{NA}s.

      \item On Alpine Linux \code{iconv()} now maps \code{"latin2"},
      \code{"latin-2"}, \code{"latin9"} and \code{"latin-9"} to encoding
      names the OS knows about (case-insensitively).

      \item \code{iconv(sub = "Unicode")} now always zero-pads to four
      (hex) digits, rather than to 4 or 8.  (This seems to have become
      the convention once Unicode restricted the number of Unicode
      points to \eqn{2^{21} - 1}{2^21 - 1} and so will never need more
      than 6 digits.)

      \item \code{NCOL(NULL)} now returns 0 instead of 1, for
      consistency with \code{cbind()}.

      \item The information for the Euro glyph missing from the Adobe
      \file{.afm} files for the Courier, Helvetica and Times families
      has been copied from their URW equivalents -- this will
      improve vertical centring in the \code{pdf()} and
      \code{postscript()} devices.

      \item The included BLAS sources have been updated to those shipped
      with LAPACK version 3.12.0.  The changes are almost entirely cosmetic.

      \item The included LAPACK sources have been updated to version
      3.12.0 and some further double-complex routines added.

      \item There are new font families for the 2014--5 URW 2.0 fonts
      (see \code{?pdf}) which are included in recent versions of
      Ghostscript.  These have font widths for most Greek glyphs and a
      few others which were missing from the original versions (whose
      font families remain available for reproducibility, although
      Ghostscript-based viewers will render using the 2.0 versions).

      \item Improve the large-n efficiency of \code{as.matrix(<dist>)},
      thanks an R contributors effort, notably by Tim Taylor and
      Heather Turner, see \PR{18660}.

      \item The default and \code{numeric} methods of \code{all.equal()}
      get a \code{check.class} option.

      \item \code{zapsmall()} gets new optional arguments, function
      \code{mFUN} and \code{min.d}, for extra flexibility; fulfills a
      wish in \PR{18199}.  Also, it is now an implicit S4 generic in
      package \pkg{methods}.

      \item The Rd filter for \code{aspell()} gains an \code{ignore}
      argument.

      \item New generic function \code{sort_by()}, primarily useful for
      the \code{data.frame} method which can be used to sort rows of a
      data frame by one or more columns.

      \item The licence headers for the \abbr{RPC} code in
      \file{src/extra/xdr} have been updated to use the GPL-compatible
      licence published by Oracle America in 2010.

      \item New function \code{pkg2HTML()} in \pkg{tools} to create
      single-page HTML reference manuals for R packages.

      \item The byte code evaluator now uses less C stack space for
      recursive calls to byte-compiled functions. It also makes more of
      an effort to avoid allocations for scalar return values.

      \item New completion option \code{backtick} (disabled by default)
      allows non-syntactic completions to be wrapped in backquotes. This
      is currently only useful for \I{Jupyter} notebooks via the
      \pkg{IRkernel} package, and may cause problems for other backends.

      \item The numeric version creators now stop on invalid
      non-character version specifications.
    }
  }

  \subsection{Installation}{
    \itemize{
      \item The parser has been updated to work with \command{bison} 3.8.2,
      which is now used for the pre-generated parsers in \file{gram.c},
      \code{file.c}, and \file{gramRd.c}. A few parser error messages
      have changed, which may affect code that relies on exact messages.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item System \I{valgrind} headers are now required to use
      \command{configure} option \option{--with-valgrind-instrumentation}
      with value \code{1} or \code{2}.

      \item \command{configure} will warn if it encounters a 32-bit
      build, as that is nowadays almost untested.

      \item Environment variable \env{R_SYSTEM_ABI} is no longer used and
      so no longer recorded in \file{etc/Renviron} (it was not on Windows
      and was only ever used when preparing package \pkg{tools}).

      \item If the \code{libdeflate} library and headers are available,
      \code{libdeflate} rather than \code{libz} is used to (de)compress
      \R objects in lazy-load databases.  Typically tasks spend up to 5\% of
      their time on such operations, although creating lazy-data
      databases is one of the exceptions.

      This can be suppressed if the library is available by the
      \command{configure} option
      \option{--without-libdeflate-compression}.

      \item \command{configure} option \option{--enable-lto=check} has
      not worked reliably since 2019 and has been removed.

      \item The minimum \command{autoconf} requirement for a maintainer
      build has been increased to \command{autoconf}\sspace{}2.71.

      It is intended to increase this to 2.72 for \R 4.5.0: the
      distributed \file{configure} file was generated using 2.72.

      \item The minimum version requirement for an external LAPACK has
      been reduced to 3.9.0.

      \item No default C++ compiler is set if no C++17 compiler is
      detected: there is no longer an automatic fallback to C++14 or
      C++11.

      Compilers from the last five years should have sufficient
      support: for others macros \code{CXX} and \code{CXXSTD} can be set
      in file \file{config.site} to provide a fallback if needed.

      The Objective-C++ compiler now by default uses the standard
      selected by \R for C++ (currently C++17) rather than the default
      standard for the C++ compiler (which on macOS is still C++98).
    }
  }

  \subsection{Installation on macOS}{
    \itemize{
      \item A new \command{configure} option \option{--with-newAccelerate}
      makes use of Apple's \sQuote{new} BLAS / LAPACK interfaces in their
      Accelerate framework.  Those interfaces are only available in macOS
      13.3 or later, and building requires \abbr{SDK} 13.3 or later (from the
      Command Line Tools or \I{Xcode} 14.3 or later).

      By default the option uses new Accelerate for BLAS calls: to also
      use it for LAPACK use option \option{--with-newAccelerate=lapack}.  The
      later interfaces provide LAPACK 3.9.1 rather than 3.2.1: 3.9.1 is
      from 2021-04 and does not include the improved algorithms
      introduced in LAPACK 3.10.0 (including for BLAS calls).
    }
  }

  \subsection{Installation on Windows}{
    \itemize{
      \item The makefiles and installer scripts for Windows have been
      tailored to \I{Rtools44}, an update of the \I{Rtools43} toolchain.  It
      is based on GCC 13 and newer versions of \I{MinGW-W64}, \I{binutils}
      and libraries (targeting 64-bit Intel CPUs).  R-devel can no longer be
      built using \I{Rtools43} without changes.

     \item \I{Rtools44} has experimental support for 64-bit ARM
     (\code{aarch64}) CPUs \emph{via} the \I{LLVM} 17 toolchain using
     \command{lld}, \command{clang}/\command{flang-new} and \code{libc++}.
  }
}


  %% \subsection{Package Installation}{
  %%   \itemize{
  %%     \item .
  %%   }
  %% }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} notes when S4-style exports are used
      without declaring a strong dependence on package \pkg{methods}.

      \item \code{tools::checkRd()} (used by \command{R CMD check})
      detects more problems with \verb{\Sexpr}-based dynamic content,
      including bad nesting of \verb{\Sexpr}s and invalid arguments.

      \item \code{tools::checkRd()} now reports Rd titles and section
      names ending in a period; this is ignored by \command{R CMD check}
      unless environment variable \env{_R_CHECK_RD_CHECKRD_MINLEVEL_} is
      set to -5 or smaller.

      \item \command{R CMD check} now notes Rd files without an
      \verb{\alias}, as long documented in \sQuote{Writing R Extensions}
      §1.3.1.
      The check for a missing \verb{\description} has been moved from
      \code{tools::checkRd()} to \code{tools::checkRdContents()}.

      \item \command{R CMD check} now visits \file{inst/NEWS.Rd}
      and OS-specific \file{man} subdirectories when checking Rd files.

      \item \code{tools::checkDocFiles()} and
      \code{tools::checkRdContents()} now also check internal Rd files
      by default, but \dQuote{specially} (ignoring missing documentation
      of arguments).

      \item \command{R CMD Rdiff} gets option \option{--useEx}.

      \item \command{R CMD check} now warns on non-portable uses of
      Fortran \code{KIND} such as \code{INTEGER(KIND=4)} and
      \code{REAL(KIND=8)}.

      To see the failing lines set environment variable
      \env{_R_CHECK_FORTRAN_KIND_DETAILS_} to a true value.

      \item When checking Rd files, \command{R CMD check} now
      notes some of the \dQuote{lost braces} that
      \code{tools::checkRd()} finds.  Typical problems are Rd macros
      missing the initial backslash (e.g., \samp{code{...}}), in-text
      set notation (e.g., \samp{{1, 2}}, where the braces need
      escaping), and \verb{\itemize} lists with \verb{\describe}-style
      entries of the form \verb{\item{label}{description}}.

      \item \command{R CMD INSTALL} (and hence \command{check}) will
      compile C++ code with \code{-DR_NO_REMAP} if environment variable
      \env{_R_CXX_USE_NO_REMAP_} is set to a true value.  It is planned
      that this will in future become the default for compiling C++.
      %% E.g. become part of \code{check --no-cran} for R 4.5.0.

      \item The new built-in Rd macro \verb{\dontdiff\{\}} can be used
      to mark example code whose output should be ignored when comparing
      check output to reference output
      (\file{tests/Examples/\var{pkg}-Ex.Rout.save}).
      The \verb{\dontdiff} tag, like \verb{\donttest}, is \emph{not}
      shown on the rendered help page, so provides a clean alternative
      to \samp{## IGNORE_RDIFF_(BEGIN|END)} comments.

      \item \command{R CMD build} when there is no \file{NAMESPACE}, now
      uses the recommended \code{exportPattern("^[^.]")}, instead of
      exporting everything.

      \item \command{R CMD check} now warns about non-ASCII characters
      in the \file{NAMESPACE} file (in addition to \R files). Such
      packages are not portable and may fail to install on some platforms.
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item Headers \file{R_ext/Applic.h} and \file{R-ext/Linpack.h}
      used to include \file{R_ext/BLAS.h} although this was undocumented and
      unneeded by their documented entry points.  They no longer do so.

      \item New function \code{R_missing()}, factored out from
      \code{do_missing()}, used to fix \PR{18579}.

      \item \code{SEXP} type \code{S4SXP} has been renamed to \code{OBJSXP}
      to support experimenting with alternative object systems.  The
      \code{S4SXP} value can still be used in \code{C} code but is now
      deprecated.  Based on contributions from the R Consortium's
      Object-Oriented Programming Working Group.

      \item New function \code{pow1p(x,y)} for accurate \code{(1+x)^y}.

      \item \code{mkCharLenCE} was incorrectly documented to take a
      \code{size_t} length but was implemented with \code{int} (and
      character strings in \R are limited to \eqn{2^{31} - 1}{2^31 - 1} bytes).
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item \code{data()} no longer handles zipped data from
      long-defunct (since \R\sspace{}2.13.0) \option{--use-zip-data}
      installations.

      \item The legacy graphics devices \code{pictex()} and
      \code{xfig()} are now deprecated.  They do not support recent
      graphics enhancements and their font handling is rudimentary. The
      intention is to retain them for historical interest as long as
      they remain somewhat functional.

      \item Support for \code{encoding = "MacRoman"} has been removed
      from the \code{pdf()} and \code{postscript()} devices -- this was
      a legacy encoding supporting classic macOS up to 2001 and no
      longer has universal \code{libiconv} support.
      %% e.g. not supported in musl

      \item \code{is.R()} is deprecated as no other S dialect is known
      to be in use (and this could only identify historical dialects,
      not future ones).

      Further information on calls can be obtained by setting the
      environment variable \env{_R_DEPRECATED_IS_R_} to \samp{error}
      which turns the deprecation warning into an error and so by
      default gives a traceback.  (This is done by \command{R CMD check
      --as-cran}.)

      \item \code{UseMethod()} no longer forwards local variables
      assigned in the generic function into method call environments
      before evaluating the method body. This makes method calls behave
      more like standard function calls and makes method code easier to
      analyze correctly.

      \item The twelve \code{as.data.frame.<class>()} methods which were
      deprecated only via \env{_R_CHECK_AS_DATA_FRAME_EXPLICIT_METHOD_} and
      in \command{R CMD check --as-cran} are formally deprecated now in
      favour of calling \code{as.data.frame()} or \code{as.data.frame.vector()}.
      The deprecation \dQuote{check} now works also when \code{as.data.frame()}
      is S4 generic thanks to \I{Ivan Krylov}.

      \item The default method for the directional comparison operators
      \code{<}, \code{>}, \code{<=}, and \code{>=} now signals an error
      when one of the operands is a language object, i.e. a symbol or a
      call.

      \item For \code{terms.formula()}, deprecate \code{abb} and \code{neg.out}
      arguments \emph{formally} in addition to just documenting it.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item The \pkg{methods} package is more robust to not being attached to
      the search path.  More work needs to be done.

      \item \code{pairwise.t.test()} misbehaved when subgroups had 0 \abbr{DF}
      for variance, even with \code{pool.sd = TRUE}.  (\PR{18594} by
      Jack Berry.)

      \item Probability distribution functions \code{[dpq]<distrib>(x, *)},
      but also \code{bessel[IKJY](x, .)} now consistently preserve
      \code{attributes(x)} when \code{length(x) == 0}, e.g., for a
      \eqn{2 \times 0}{2 x 0} matrix, thanks to \I{Karolis Koncevičius}'
      report \PR{18509}.

      \item Group \dQuote{Summary} computations such as
      \code{sum(1:3, 4, na.rm = 5, NA, 7, na.rm = LL)} now give an error
      instead of either \code{17} or \code{NN} for \code{LL} true or false,
      as proposed by \I{Ivan Krylov} on the R-devel mailing list.  (This
      also means it is now an error to specify \code{na.rm} more than once.)

      \item \code{as.complex(x)} now returns \code{complex(real = x,
      imaginary = 0)} for \emph{all} numerical and logical \code{x},
      notably also for \code{NA} or \code{NA_integer_}.

      \item Directories are now omitted by
      \code{file.copy(, recursive = FALSE)} and in \code{file.append()}
      (\PR{17337}).

      \item \code{gsub()} and \code{sub()} are now more robust to integer
      overflow when reporting errors caused by too large input strings
      (\PR{18346}).

      \item Top-level handlers are now more robust to attempts to remove a
      handler whilst handlers are running (\PR{18508}).

      \item The handling of \code{Alt+F4} in \I{dialogs} created on Windows using
      \I{GraphApp} has been fixed (\PR{13870}).

      \item \code{density()} more consistently computes grid values for the
      FFT-based convolution, following \I{Robert Schlicht}'s analysis and
      proposal in \PR{18337}, correcting density values typically by a
      factor of about 0.999.  Argument \code{old.coords = TRUE} provides
      back compatibility.

      \item \code{palette.colors()} gains a \code{name} argument that
      defaults to \code{FALSE} controlling whether the vector of colours
      that is returned has names (where possible).  \PR{18529}.

      \item \code{tools::xgettext()} no longer extracts the
      (non-translatable) class names from \code{warningCondition} and
      \code{errorCondition} calls.

      \item \code{S3method(<gen>, <class>, <func>)} in the \file{NAMESPACE}
      file now works (again) when \code{<func>} is visible from the
      namespace, e.g., imported, or in base.

      \item \code{getParseData(f)} now also works for a function defined
      in the first of several \file{<pkg>/R/*.R} source files, thanks to
      \I{Kirill Müller}'s report and Duncan Murdoch's patch in \PR{16756}.

      \item Rd \verb{\Sexpr} macros with nested \verb{#ifdef}
      conditionals were not processed.

      \item A non-blocking connection with non-default encoding (such as
      a socket) now correctly returns from \code{readLines()} after new
      data has arrived also when its \abbr{EOF} had been reached
      previously.  Thanks to \I{Peter Meilstrup}'s report on R-devel and
      \I{Ivan Krylov}'s report and patch proposal in \PR{18555}.

      \item \code{tools::checkRdContents()} failed to detect empty
      argument descriptions when they spanned multiple lines,
      including those generated by \code{prompt()}.
      These cases are now noted by \command{R CMD check}.

      \item Plain-text help no longer outputs spurious colons in the
      arguments list (for multi-line \verb{\item} labels in the Rd source).

      \item \code{kappa()} and \code{rcond()} work correctly in more cases;
      \code{kappa(., norm = "2")} now warns that it computes the 1-norm with
      (default) \code{exact = FALSE}; prompted by \I{Mikael Jagan}'s quite
      comprehensive \PR{18543}.

      \item Rd skeletons generated by \code{prompt()} or
      \code{promptData()} now use a dummy title (so \command{R CMD
      build} works).  \code{tools::checkRdContents()} has been updated
      to detect such template leftovers, including from
      \code{promptPackage()}.

      \item When S4 method dispatch fails because no method was found, the
      error message now includes the signature argument names; thanks to
      Michael Chirico's proposal on the R-devel list.

      \item \code{withAutoprint({ .. })} now preserves \code{srcref}s
      previously lost, thanks to Andrew Simmons' report plus fix in
      \PR{18572}.

      \item \code{transform.data.frame()} no longer adjusts names;
      in particular, untransformed variables are kept as-is,
      including those with syntactically invalid names (\PR{17890}).

      \item The \code{keep.source} option for Rd \verb{\Sexpr} blocks is
      no longer ignored.

      \item The \code{formula} methods for \code{t.test()} and
      \code{wilcox.test()} now catch when \code{paired} is passed,
      addressing \PR{14359}; use \code{Pair(x1, x2) ~ 1} for a paired test.

      \item The level reported in the \code{browser} prompt was often too
      large. It now shows the number of browser contexts on the stack.

      \item For \code{cbind()} and \code{rbind()}, the optional
      \code{deparse.level} argument is now properly passed to methods,
      thanks to \I{Mikael Jagan}'s \PR{18579} and comments there.

      \item Some error and warning messages for large (\sQuote{long
	vector}) \code{matrix(v, nr, nc)} and \code{dim(m) <- d} are now
      correct about sizes, using \code{long long} formatting, fixing
      \PR{18612} (and more) reported by \I{Mikael Jagan}.

      \item \code{readChar(useBytes = TRUE)} now terminates strings even when
      the underlying connection uses extra spaces in the input buffer.  This
      fixes problems with extra garbage seen with \command{gzip}
      connections, \PR{18605}.

      \item Named capture in PCRE regular expressions now works also with
      more than 127 named groups (\PR{18588}).

      \item Datetime functions are now robust against long jumps when
      dealing with internal time zone changes.  This avoids confusing
      warnings about an invalid time zone, previously triggered by turning
      warnings into errors or handling them via \code{tryCatch} (\PR{17966},
      \PR{17780}).

      \item Datetime functions now restore even an empty \env{TZ}
      environment variable after internal time zone changes (\PR{17724}).
      This makes results of datetime functions with this (typically
      unintentional) setting more predictable.

      \item \code{drop.terms(*)} now drops response as by default,
      \code{keep.response = FALSE}, fixing \PR{18564} thanks to \I{Mikael Jagan}.

      \item \code{dummy.coef(.)} now also works for \code{lm()}-models with
      \code{character} categorical predictor variables rather than
      \code{factor} ones, fixing \PR{18635} reported by \I{Jinsong Zhao}.

      \item \code{formals(f) <- formals(f)} now also works for a function
      w/o arguments and atomic \emph{constant} \code{body(f)}.

      \item Correct \code{as.function(<invalid list>, .)}'s error message.

      \item \code{removeSource()} is yet more thorough in finding and
      removing \code{"srcref"} and the other source references from parsed
      \R language chunks, fixing \PR{18638} thanks to Andrew Simmons.

      \item \code{dgeom()} is more accurate now, notably when its result is
      very small, fixing \PR{18642} thanks to the proposal of \I{Morten Welinder},
      also improving other instances where C level \code{binom_raw(x, n, ..)}
      has \code{x == 0} or \code{x== n}.

      \item \code{warning()} with \code{options(warn = 1)} has improved
      output for multi-line messages.

      \item \code{axis.Date()} and \code{axis.POSIXct()} now respect the
      \code{par("lab")} setting for the number of \code{pretty()} intervals.

      \item Comparisons for language objects (which are based on
      deparsing) are now more careful about using accurate deparsed
      results (\PR{18676}).

      \item Plain-text help (\code{Rd2txt}) now correctly preserves
      blank lines following single-line \verb{\dontrun} code.

      \item \code{<POSIXlt>[*]} no longer sets wrong \code{"balanced"}
      attribute, fixing \PR{18681} thanks to \I{Mikael Jagan}.

      \item \code{str(<classed-call>)} now deparses the call as expected,
      fixing \PR{18684}, reported by \I{Dave Slager}.

      \item In Rd examples, code following the closing brace of a
      \verb{\dontrun}, \verb{\dontshow} or \verb{\donttest} tag
      on the same line is no longer skipped when \command{R CMD check}
      runs the examples.

      \item \code{as.data.frame(matrix(*, ncol=0))} now gets valid
      \code{names()} and \code{colnames()}; reported by \I{Davis Vaughan}
      on the R-devel list.

      \item Internal \I{Mathlib} function \code{stirlerr(n)} is now almost
      fully (52-bit) accurate for all \eqn{n >= ~5.9} and more accurate
      also in the range \eqn{1 -- 5.9}.  This entails small (\dQuote{after
      \I{12th} decimal}) changes in density functions, e.g., \code{dgamma()}
      in  \emph{some} regions of their support.   The fix was partly
      prompted by \I{Morten Welinder}'s \PR{18640}.

      \item Numbers like \code{9876543.2} are now considered non-integer by
      \I{Mathlib} internal \code{R_nonint()}, amending original fix of \PR{15734}.

      \item Rd comment lines no longer cause broken paragraphs in the
      rendered PDF and plain-text help. In code blocks, pure comment
      lines (starting with \samp{\%}) no longer produce an empty line.

      \item \code{xtabs(Freq ~ .)} now consistently defaults to
      \code{na.action = na.pass}, using \code{na.rm = FALSE} (added as an
      argument) when summing over \code{Freq} (\PR{17770}).

      \item \code{tools::testInstalledPackage()} is no longer silent
      about failures from running examples or tests and its return code
      no longer ignores failures from checking vignettes.
    }
  }
}

\section{\Rlogo Changes in R 4.3.3}{

  \subsection{New Features}{
    \itemize{
      \item \code{iconv()} now fixes up variant encoding names such as
      \code{"utf8"} case-insensitively.
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item The legacy \code{encoding = "MacRoman"} is deprecated in
      \code{pdf()} and \code{postscript()}: support was incomplete in
      earlier versions of \R.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item Arguments are now properly forwarded to methods on S4 generics
      with \dots{} in the middle of their formal arguments. This was
      broken for the case when a method introduced an argument but did
      not include \dots{} in its own formals. Thanks to \I{Hervé Pagès} for
      the report \PR{18538}.

      \item Some invalid \code{file} arguments to \code{pictex()},
      \code{postscript()} and \code{xfig()} opened a file called
      \samp{NA} rather than throw an error.  These included
      \code{postscript(NULL)} (which some people expected to work like
      \code{pdf(NULL)}).

      \item Passing \code{filename = NA} to \code{svg()}, \code{cairo_pdf()},
      \code{cairo_ps()} or the Cairo-based bitmap devices opened a file
      called \samp{NA}: it now throws an error.

      \item \code{quartz(file = NA)} opened a file called \samp{NA}, including
      when used as a Quartz-based bitmap device.  It now gives an error.

      \item \code{rank(<long vector>)} now works, fixing \PR{18617}, thanks to
      \I{Ilia Kats}.

      \item \code{seq.int()} did not adequately check its
      \code{length.out} argument.

      \item \code{match(<POSIXct>, .)} is correct again for differing time
      zones, ditto for \code{"POSIXlt"}, fixing \PR{18618} reported by
      \I{Bastian Klein}.

      \item \code{drop.terms(*, dropx = <0-length>)} now works, fixing
      \PR{18563} as proposed by \I{Mikael Jagan}.

      \item \code{drop.terms(*)} keeps \code{ + offset(.)} terms when it should,
      \PR{18565}, and \code{drop.terms()} no longer makes up a response,
      \PR{18566}, fixing both bugs thanks to \I{Mikael Jagan}.

      \item \code{getS3method("t", "test")} no longer finds the
      \code{t.test()} function, fixing \PR{18627}.

      \item \code{pdf()} and \code{postscript()} support for the documented
      Adobe encodings \code{"Greek"} and \code{"Cyrilllic"} was missing
      (although the corresponding Windows' codepages could be used).

      \item Computations of glyph metric information for \code{pdf()}
      and \code{postscript()} did not take into account that
      transliteration could replace one character by two or more (only
      seen on macOS 14) and typically warned that the information was
      not known.

      \item \code{rank(x)} no longer overflows during integer addition, when
      computing rank average for largish but not-yet long vector \code{x},
      fixing \PR{18630}, thanks to \I{Ilia Kats}.

      \item \code{list.files()} on Windows now returns also files with names
      longer that 260 bytes (the Windows limit is 260 characters).
      Previously, some file names particularly with \sQuote{East Asian}
      characters were omitted.

      \item \code{cov2cor(<0 x 0>)} now works, fixing \PR{18423} thanks to
      \I{Mikael Jagan} and \I{Elin Waring}.

      \item \code{cov2cor(<negative diagonal>)} and similar now give one
      warning instead of two, with better wording, fixing \PR{18424} thanks
      to \I{Mikael Jagan}.

      \item \pkg{tools}\code{:: startDynamicHelp()} now ensures \code{port}
      is in proper range, fixing \PR{18645}.

      \item \code{pbeta(x, a,b)} is correct now for \code{x}=0 or 1 in the
      boundary cases where \code{a} or \code{b} or both are 0, fixing
      \PR{18672} thanks to Michael Fay.

      \item \code{pmatch(x, table)} for large \code{table}, also called for
      data frame row selection, \code{dfrm[nm, ]}, is now interruptible,
      fixing \PR{18656}.

      \item \code{predict(<rank-deficient lm>, newdata=*)} fix computing of
      \code{nbasis}, see \I{Russ Lenth}'s comment 29 in \PR{16158}.

      \item Added a work-around for a bug in macOS 14.3.1 and higher which
      prevents R plots in the Quartz Cocoa device from updating on screen.
    }
  }
}

\section{\Rlogo Changes in R 4.3.2}{
  \subsection{New Features}{
    \itemize{
      \item The default initialization of the \code{"repos"} option
      from the \file{repositories} file at startup can be skipped by
      setting environment variable \env{R_REPOSITORIES} to \code{NULL}
      such that \code{getOption("repos")} is empty if not set elsewhere.

      \item \code{qr.X()} is now an implicit S4 generic in \pkg{methods}.

      \item \code{iconv(to = "ASCII//TRANSLIT")} is emulated using
      substitution on platforms which do not support it (notably Alpine
      Linux).  This should give a human-readable conversion in ASCII on
      all platforms (rather than \code{NA_character_}).

      \item \code{trans3d()} gains options \code{continuous} and
      \code{verbose} addressing the problem of possible \dQuote{wrap
	around} when projecting too long curves, as reported by \I{Achim
      Zeileis} in \PR{18537}.

      \item \code{tools::showNonASCII()} has been rewritten to work
      better on macOS 14 (which has a changed implementation of
      \code{iconv()}).

      \item \code{tiff(type = "quartz")} (the default on macOS) now warns
      if \code{compression} is specified: it continues to be ignored.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item There is some support for building with Intel's \I{LLVM}-based
      compilers on \samp{x86_64} Linux, such as (C) \command{icx}, (C++)
      \command{ipcx} and (Fortran) \command{ifx} from \I{oneAPI} 2023.x.y.

      \item There is support for using \I{LLVM}'s \command{flang-new} as the
      Fortran compiler from \I{LLVM} 16.0.x (preferably 17.0.0
      or later).
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} reports the use of the Fortran 90 random
      number generator \code{RANDOM_NUMBER()} and the subroutines to
      initialize it.

      \sQuote{Writing R Extensions} has example code to use \R{}'s \abbr{RNG}s
      from Fortran.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{substr(x, n, L) <- cc} now works (more) correctly for
      multibyte UTF-8 strings \code{x} when \code{L > nchar(x)}, thanks to
      a report and patch by \sQuote{Architect 95}.

      \item \code{contrib.url(character())} now returns 0-length
      \code{character()} as documented, which also avoids spurious
      warnings from \code{available.packages()} \abbr{et al.}\sspace{}in the
      edge case of an empty vector of repository URLs.

      \item \code{readChar(., 4e8)} no longer fails, thanks to \I{Kodi Arfer}'s
      report (\PR{18557}).

      \item \code{lapply(<list>, as.data.frame)} no longer warns falsely for
      some base vector components.

      \item Communication between parent and child processes in the
      \code{multicore} part of \code{parallel} could fail on platforms
      that do not support an arbitrarily large payload in system
      functions \code{read()}/\code{write()} on pipes (seen on macOS
      where a restriction to \code{INT_MAX} bytes is documented, without
      doing a partial read unlike Linux). The payload is now split into
      1\abbr{Gb} chunks to avoid that problem. (\PR{18571})

      \item \code{qqplot(x,y, conf.level=.)} gives better confidence bounds
      when \code{length(x) != length(y)}, thanks to \I{Alexander Ploner}'s
      report and patch proposal (\PR{18557}).

      \item \code{norm(<0-length>, "2")} now gives zero instead of an
      error, as all the other norm types, thanks to \I{Mikael Jagan}'s \PR{18542}.

      \item Build-stage Rd macros \verb{\packageAuthor} and
      \verb{\packageMaintainer} now process \samp{Authors@R},
      fixing \samp{NA} results when the package \file{DESCRIPTION} omits
      \samp{Author} and \samp{Maintainer} fields.

      \item Formatting and printing complex numbers could give things
      like \samp{0.1683-0i} because of rounding error: \samp{-0i} is now
      replaced by \samp{+0i}.

      \item \code{postscript()} refused to accept a \code{title} comment
      containing the letter \dQuote{W} (\PR{18599}).

      \item \code{isoreg(c(1,Inf))} signals an error instead of
      segfaulting, fixing \PR{18603}.

      \item \code{tiff(type = "Xlib")} was only outputting the last page
      of multi-page plots.

      \item \code{tools::latexToUtf8()} again knows about \samp{\\~{n}}
      and other letters with tilde, fixing a regression in \R 4.3.0,
      and about \samp{\\^{i}} as an alternative to \samp{\\^{\\i}}
      (similarly with other accents).
      Furthermore, \LaTeX codes for accented I letters are now
      correctly converted, also fixing related mistakes in
      \code{tools::encoded_text_to_latex()}.

      \item \code{tar(*, tar = "internal")} no longer creates out-of-spec
      tar files in the very rare case of user or group names longer than
      32 bytes, fixing \PR{17871} with thanks to \I{Ivan Krylov}.

      \item When using the \dQuote{internal} timezone datetime code, adding
       a fraction of a second no longer adds one second, fixing \PR{16856}
       from a patch by \I{Ivan Krylov}.

      \item \code{tools::checkRd()} no longer produces spurious notes
      about \dQuote{unnecessary braces} from multi-line Rd results of
      \verb{\Sexpr} macros.
    }
  }
}

\section{\Rlogo Changes in R 4.3.1}{
  \subsection{C-Level Facilities}{
    \itemize{
      \item The C-level API version of \R's \code{integrate()},
      \code{Rdqags()} in \file{Applic.h}, now returns the correct number of
      integrand evaluations \code{neval}, fixing \PR{18515} reported and
      diagnosed by Stephen Wade.

      \item The C prototypes for LAPACK calls \code{dspgv} and \code{dtptrs}
      in \file{R_ext/Lapack.h} had one too many and one too few
      character length arguments --- but this has not caused any known
      issues. To get the corrected prototypes, include
      \preformatted{
	#include <Rconfig.h> // for PR18534fixed
	#ifdef PR18534fixed
	# define usePR18534fix 1
        #endif
	#include <R_ext/Lapack.h>
      }
      in your C/C++ code (\PR{18534}).
    }
  }

  \subsection{Installation}{
    \itemize{
      \item Many of the checks of esoteric Internet operations and those
      using unreliable external sites have been moved to a new target
      that is not run by default and primarily intended for the core
      developers.  To run them use
\preformatted{
	cd tests; make test-Internet-dev
}
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{.S3methods()}, typically called from \code{methods()},
      again marks methods from package \pkg{base} as \code{visible}.

      Also, the visibility of non-\pkg{base} methods is again determined by
      the method's presence in \code{search()}.

      \item \code{tools::Rdiff()} is now more robust against invalid
      strings, fixing installation tests on Windows without \I{Rtools}
      installed (\PR{18530}).

      \item Fix (new) bug in \code{hcl.colors(2, *)}, by \I{Achim Zeileis} (\PR{18523}).

      \item \code{head(., <illegal>)} and \code{tail(..)} now produce
      more useful \code{"Error in ...."} error messages, fixing \PR{18362}.

      \item Package code syntax on Windows is checked in UTF-8 when UTF-8 is
      the native encoding.

      \item \code{na.contiguous(x)} now also returns the first run, when it
      is at the beginning and there is a later one of the same length;
      reported to R-devel, including a fix, by \I{Georgi Boshnakov}.
      Further, by default, it modifies only an existing
      \code{attr(*,"tsp")} but otherwise no longer sets one.

      \item \code{chol(<not pos.def>, pivot = <T|F>)} now gives a correct
      error or warning message (depending on \code{pivot}), thanks to
      \I{Mikael Jagan}'s (\PR{18541}).
    }
  }
}

\section{\Rlogo Changes in R 4.3.0}{
  \subsection{Significant User-Visible Changes}{
    \itemize{
      \item Calling \code{&&} or \code{||} with LHS or (if evaluated) RHS of
      length greater than one is now always an error, with a report of
      the form
\preformatted{    'length = 4' in coercion to 'logical(1)'}

      Environment variable \env{_R_CHECK_LENGTH_1_LOGIC2_} no longer has
      any effect.
    }
  }

  \subsection{New Features}{
    \itemize{
      \item The included BLAS sources have been updated to those shipped
      with LAPACK version 3.10.1.  (This caused some platform-dependent
      changes to package check output.)  And then to the sources from
      LAPACK version 3.11.0 (with changes only to double complex
      subroutines).

      \item The included LAPACK sources have been updated to include the
      four Fortran 90 routines rather than their Fortran 77
      predecessors.  This may give some different signs in \abbr{SVD}s or
      eigendecompositions..  (This completes the transition to LAPACK
      3.10.x begun in \R 4.2.0.)

      \item The LAPACK sources have been updated to version 3.11.0.  (No
      new subroutines have been added, so this almost entirely bug
      fixes: Those fixes do affect some computations with \code{NaN}s,
      including \R's \code{NA}.)

      \item The parser now signals \emph{classed} errors, notably in
      case of the pipe operator \code{|>}.  The error object and
      message now give line and column numbers, mostly as proposed and
      provided by Duncan Murdoch in \PR{18328}.

      \item \code{toeplitz()} is now generalized for asymmetric cases,
      with a \code{toeplitz2()} variant.

      \item \code{xy.coords()} and \code{xyz.coords()} and consequently,
      e.g., \code{plot(x,y, log = "y")} now signal a \emph{classed} warning
      about negative values of y (where \code{log(.)} is \code{NA}).
      Such a warning can be specifically suppressed or caught otherwise.

      \item Regular expression functions now check more thoroughly whether
      their inputs are valid strings (in their encoding, e.g.\sspace{}in UTF-8).

      \item The performance of \code{grep()}, \code{sub()},
      \code{gsub()} and \code{strsplit()} has been improved,
      particularly with \code{perl = TRUE} and \code{fixed = TRUE}.  Use
      of \code{useBytes = TRUE} for performance reasons should no longer
      be needed and is discouraged: it may lead to incorrect results.

      \item \code{apropos()} gains an argument \code{dot_internals} which
      is used by the completion (\code{help(rcompgen)}) engine to also
      see \pkg{base} internals such as \code{.POSIXct()}.

      \item Support in \code{tools::Rdiff()} for comparing uncompressed
      PDF files is further reduced -- see its help page.

      \item \code{qqplot(x, y, ...)} gains \code{conf.level} and
      \code{conf.args} arguments for computing and plotting a confidence
      band for the treatment function transforming the distribution of
      \code{x} into the distribution of \code{y } (\I{Switzer}, 1976,
      \emph{\I{Biometrika}}). Contributed by \I{Torsten Hothorn}.

      \item Performance of \code{package_dependencies()} has been improved
      for cases when the number of dependencies is large.

      \item Strings newly created by \code{gsub()}, \code{sub()} and
      \code{strsplit()}, when any of the inputs is marked as \code{"bytes"},
      are also marked as \code{"bytes"}.  This reduces the risk of creating
      invalid strings and accidental substitution of bytes deemed invalid.

      \item Support for \code{readLines(encoding = "bytes")} has been added to
      allow processing special text files byte-by-byte, without creating
      invalid strings.

      \item \code{iconv(from = "")} now takes into account any declared
      encoding of the input elements and uses it in preference to the native
      encoding.  This reduces the risk of accidental creation of invalid
      strings, particularly when different elements of the input have
      different encoding (including \code{"bytes"}).

      \item Package repositories in \code{getOption("repos")} are now
      initialized from the \file{repositories} file when \pkg{utils} is
      loaded (if not already set, e.g., in \file{.Rprofile}).
      (From a report and patch proposal by Gabriel Becker in \PR{18405}.)

      \item \code{compactPDF()} gets a \code{verbose} option.

      \item \code{type.convert()} and hence \code{read.table()} get new
      option \code{tryLogical = TRUE} with back compatible default.  When
      set to false, converts \code{"F"} or \code{"T"} columns to character.

      \item Added new unit prefixes \code{"R"} and \code{"Q"} for
      abbreviating (unrealistically large) sizes beyond \eqn{10^{27}} in
      \code{standard = "SI"}, thanks to \I{Henrik Bengtsson}'s \PR{18435}.

      \item \code{as.data.frame()}'s default method now also works fine
      with atomic objects inheriting from classes such as \code{"roman"},
      \code{"octmode"} and \code{"hexmode"}, thus fulfilling the wish of
      \PR{18421}, by \I{Benjamin Feakins}.

      \item The \code{as.data.frame.vector()} utility now errors for
      wrong-length \code{row.names}.  It warned for almost six years, with
      \dQuote{Will be an error!}.

      \item \code{sessionInfo()} now also contains \code{La_version()} and
      reports codepage and timezone when relevant, in both \code{print()}
      and \code{toLatex()} methods which also get new option \code{tzone}
      for displaying timezone information when \code{locale = FALSE}.

      \item New function \code{R_compiled_by()} reports the C and
      Fortran compilers used to build \R, if known.

      \item \code{predict(<lm>, newdata = *)} no longer unnecessarily creates
      an \code{offset} of all \code{0}s.

      \item \code{solve()} for complex inputs now uses argument \code{tol}
      and by default checks for \sQuote{computational singularity} (as
      it long has done for numeric inputs).

      \item \code{predict(<rank-deficient lm>, newdata=*)} now obeys a new
      argument \code{rankdeficient}, with new default \code{"warnif"},
      warning only if there are non-estimable cases in \code{newdata}.
      Other options include \code{rankdeficient = "NA"}, predicting \code{NA}
      for non-estimable \code{newdata} cases.
      This addresses \PR{15072} by \I{Russ Lenth} and is based on his original
      proposal and discussions in \PR{16158} also by \I{David Firth} and \I{Elin Waring}.
      Still somewhat experimental.

      \item \command{Rgui} console implementation now works better with the
      \code{NVDA} screen reader when the full blinking cursor is selected.
      The underlying improvements in cursor handling may help also other
      screen readers on Windows.

      \item The drop-field control in \I{GraphApp} can now be left with the TAB
      key and all controls can be navigated in the reverse order using the
      Shift+TAB key, improving accessibility of the \command{Rgui}
      configuration editor.

      \item \code{qnorm(<very large negative>, log.p=TRUE)} is now fully
      accurate (instead of to \dQuote{only} minimally five digits).

      \item \code{demo(error.catching)} now also shows off
      \code{withWarnings()} and \code{tryCatchWEMs()}.

      \item As an experimental feature the placeholder \code{_} can now
      also be used in the \code{rhs} of a forward pipe \code{|>}
      expression as the first argument in an extraction call, such as
      \code{_$coef}. More generally, it can be used as the head of a
      chain of extractions, such as \code{_$coef[[2]]}.

      \item Spaces in the environment variable used to choose the \R
      session's temporary directory (\env{TMPDIR}, \env{TMP} and
      \env{TEMP} are tried in turn) are now fatal.  (On Windows the
      \sQuote{short path} version of the path is tried and used if that
      does not contain a space.)

      \item \code{all.equal.numeric()} gets a new optional switch
      \code{giveErr} to return the numeric error as attribute.  \I{Relatedly},
      \code{stopifnot(all.equal<some>(a, b, ..))} is as \dQuote{smart} now,
      as \code{stopifnot(all.equal(....))} has been already, thus allowing
      customized \code{all.equal<Some>()} wrappers.

      \item \R on Windows is now able to work with path names longer than
      260 characters when these are enabled in the system (requires at least
      Windows 10 version 1607).  Packages should be updated to work with
      long paths as well, instead of assuming \code{PATH_MAX} to be the
      maximum length.  Custom front-ends and applications embedding \R need
      to update their manifests if they wish to allow this feature.  See
      \url{https://blog.r-project.org/2023/03/07/path-length-limit-on-windows}
      for more information.

      \item \sQuote{Object not found} and \sQuote{Missing argument}
      errors now give a more accurate error context. Patch provided by
      Lionel Henry in \PR{18241}.

      \item The \code{@} operator is now an S3 generic. Based on
      contributions by \I{Tomasz Kalinowski} in \PR{18482}.

      \item New generic \code{chooseOpsMethod()} provides a mechanism
      for objects to resolve cases where two suitable methods are found
      for an Ops Group Generic. This supports experimenting with
      alternative object systems.
      Based on contributions by \I{Tomasz Kalinowski} in \PR{18484}.

      \item \code{inherits(x, what)} now accepts values other than a
      simple character vector for argument \code{what}. A new generic,
      \code{nameOfClass()}, is called to resolve the class name from
      \code{what}. This supports experimenting with alternative object
      systems.
      Based on contributions by \I{Tomasz Kalinowski} in \PR{18485}.

      \item Detection of BLAS/LAPACK in use (\code{sessionInfo()}) with
      \I{FlexiBLAS} now reports the current backend.

      \item The \code{"data.frame"} method for \code{subset()} now warns
      about extraneous arguments, typically catching the use of \samp{=}
      instead of \samp{==} in the \code{subset} expression.

      \item Calling \code{a:b} when numeric \code{a} or \code{b} is longer
      than one may now be made into an error by setting environment variable
      \env{_R_CHECK_LENGTH_COLON_} to a true value, along the proposal in
      \PR{18419} by \I{Henrik Bengtsson}.

      \item \code{density(x, weights = *)} now warns if automatic bandwidth
      selection happens without using \code{weights}; new optional
      \code{warnWbw} may suppress the warning.  Prompted by \I{Christoph
      Dalitz}' \PR{18490} and its discussants.

      \item \code{rm(list = *)} is faster and more readable thanks to
      \I{Kevin Ushey}'s \PR{18492}.

      \item The \code{plot.lm()} function no longer produces a normal
      Q-Q plot for GLMs. Instead it plots a half-normal Q-Q plot of the
      absolute value of the standardized deviance residuals.

      \item The \code{print()} method for class \code{"summary.glm"} no
      longer shows summary statistics for the deviance residuals by
      default.  Its optional argument \code{show.residuals} can be used
      to show them if required.

      \item The \code{tapply()} function now accepts a data frame as its
      \code{X} argument, and allows \code{INDEX} to be a formula in that
      case. \code{by.data.frame()} similarly allows \code{INDICES} to be
      a formula.

      \item The performance of \code{df[j] <- value} (including for
      missing \code{j}) and \code{write.table(df)} has been improved for
      data frames \code{df} with a large number of columns.  (Thanks to
      Gabriel Becker's \PR{18500}, \PR{18503} and discussants, prompted
      by a report from Toby Dylan Hocking on the R-devel mailing list.)

      \item The matrix multiply operator \code{\%*\%} is now an S3 generic,
      belonging to new group generic \code{matrixOps}.
      From \I{Tomasz Kalinowski}'s contribution in \PR{18483}.

      \item New function \code{array2DF()} to convert arrays to data
      frames, particularly useful for the list arrays created by
      \code{tapply()}.
    }
  }

  \subsection{Dates and Times}{
    \itemize{
      \item On platforms where (non-UTC) datetimes before 1902 (or
      before 1900 as with system functions on recent macOS) are guessed
      by extrapolating time zones from 1902-2037, there is a warning at
      the first use of extrapolation in a session.  (As all time zones
      post 2037 are extrapolation, we do not warn on those.)

      \item (Platforms using \option{--with-internal-tzone}, including
      Windows and by default macOS). How years are printed in dates or
      date-times can be controlled by environment variable
      \env{R_PAD_YEARS_BY_ZERO}.  The default remains to pad to 4 digits
      by zeroes, but setting value \samp{no} gives no padding (as used
      by default by \code{glibc}).

      \item \code{strftime()} tries harder to determine the offset for
      the \code{"\%z"} format, and succeeds on the mainstream \R platforms.

      \item \code{strftime()} has a limit of 2048 bytes on the string
      produced -- attempting to exceed this is an error.  (Previously it
      silently truncated at 255 bytes.)

      \item \code{sessionInfo()} records (and by default prints) the
      system time zone as part of the locale information.  Also, the
      source (system/internal) of the date-time conversion and printing
      functions.

      \item Objects of class \code{"POSIXlt"} created in this version of
      \R always have 11 components: component \code{zone} is always set,
      and component \code{gmtoff} is set for times in UTC and usually
      set on the (almost all) platforms which have C-level support,
      otherwise is \code{NA}.

      \item There are comprehensive validity checks on the structure of
      objects of class \code{"POSIXlt"} when converting (including
      formatting and printing).  (This avoids mis-conversions of
      hand-crafted objects.)

      \item There is some support for using the native date-time
      routines on macOS: this is only viable on recent versions
      (e.g.\sspace{}12.6 and 13) and does get wrong some historical changes
      (before 1900, during WWII).  Use of \option{--with-internal-tzone}
      remains the default.

      \item \code{as.POSIXct(<numeric>)} and \code{as.POSIXlt(.)} (without
      specifying \code{origin}) now work.
      So does \code{as.Date(<numeric>)}.

      \item \code{as.Date.POSIXct(., tz)} now treats several \code{tz}
      values, notably \code{"GMT"} as equivalent to \code{"UTC"}, proposed
      and improved by \I{Michael Chirico} and \I{Joshua Ulrich} in \PR{17674}.

      \item Experimental \code{balancePOSIXlt()} utility allows using
      \dQuote{ragged} and or out-of-range \code{"POSIXlt"} objects more
      correctly, e.g., in subsetting and \I{subassignment}s.  Such objects
      are now documented.
      Complemented by the low-level \code{unCfillPOSIXlt()} utility.

      More experimentally, a \code{"POSIXlt"} object may have an attribute
      \code{"balanced"} indicating if it is known to be filled or fully
      balanced.

      \item Functions \code{axis.Date()} and \code{axis.POSIXct()} are
      rewritten to gain better default tick locations and better default
      formats via the corresponding \code{pretty()} methods.
      Thanks to \I{Swetlana Herbrandt}.

      \item The mapping of Windows' names for time zones to \abbr{IANA}'s
      \sQuote{Olson} names has been updated.  When ICU is available (it is
      by default), it is used to get a mapping for the current region set in
      Windows.  This can be overridden by setting environment variable
      \env{TZ} to the desired Olson name --- see \code{OlsonNames()} for
      those currently available.
     }
  }

  \subsection{Graphics}{
    \itemize{
      \item The graphics engine version, \code{R_GE_version}, has been
      bumped to \code{16} and so packages that provide graphics devices
      should be reinstalled.

      \item The \pkg{grDevices} and \pkg{grid} packages have new
      functions for rendering typeset glyphs, primarily:
      \code{grDevices::glyphInfo()} and \code{grid::grid.glyph()}.

      Rendering of typeset glyphs is only supported so far on the
      Cairo-based graphics devices and on the \code{pdf()} and
      \code{quartz()} devices.

      \item The defined behaviour for \code{"clear"} and \code{"source"}
      compositing operators (via \code{grid::grid.group()}) has been
      changed (to align better with
      simple interpretation of original Porter-Duff definitions).

      \item Support for gradients, patterns, clipping paths, masks,
      groups, compositing operators, and affine transformations has
      been added to the \code{quartz()} device.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item A system installation of generic LAPACK 3.10.0 or later will
      be preferred to the version in the \R sources.

      \command{configure} option \option{--with-lapack=no} (equivalently
      \option{--without-lapack}) forces compilation of the internal
      LAPACK sources.

      If \option{--with-lapack} is not specified, a system
      \code{liblapack} is looked for and used if it reports version
      3.10.0 or later and does not contain BLAS routines.

      Packages using LAPACK will need to be reinstalled if this changes
      to using an external library.

      \item On \samp{aarch64} Linux platforms using GCC,
      \command{configure} now defaults to \option{-fPIC} (instead of
      \option{-fpic}), as desired in \PR{18326}.

      \item \command{configure} now checks conversion of datetimes
      between \code{POSIXlt} and \code{POSIXct} around year 2020.  Failure
      (which has been seen on platforms missing \code{tzdata}) is fatal.

      \item If \command{configure} option
      \option{--with-valgrind-instrumentation} is given value \code{1}
      or \code{2}, option \option{--with-system-valgrind-headers} is now
      the default and ignored (with a warning).  It is highly
      recommended that the system headers are installed alongside
      \command{valgrind}: they are part of its packaging on some Linux
      distributions and packaged separately (e.g.\sspace{}in the
      \file{valgrind-devel} RPM) on others.  \command{configure} will
      give a warning if they are not found.

      The system headers will be required in a future release of \R
      to build with \command{valgrind} instrumentation.

      \item \code{libcurl} 8.x is now accepted by \command{configure}:
      despite a change in major version number it changes neither API
      nor \abbr{ABI}.
    }
  }

  \subsection{Installation on Windows}{
    \itemize{
      \item The makefiles and installer scripts for Windows have been
      tailored to \I{Rtools43}, an update of the \I{Rtools42}
      toolchain.  It is based on GCC 12 and newer versions of
      \I{MinGW-W64}, \I{binutils} and libraries.  At this time R-devel can still
      be built using \I{Rtools42} without changes, but when R-devel is
      installed via the installer, it will by default look for \I{Rtools43}.

      \item Old make targets \code{rsync-extsoft} and 32-bit ones that
      are no longer needed have been removed.

      \item Default builds (including for packages) no longer select
      C99.  Thus the C standard used is the default for the compiler,
      which for the toolchain in \file{Rtools43} is C17.  (This is
      consistent with Unix builds.)
    }
  }

  \subsection{Package Installation}{
    \itemize{
      \item The default C++ standard has been changed to C++17 where
      available (which it is on all currently checked platforms): if not
      C++14 or C++11 is used if available otherwise C++ is not supported.

      \item \code{USE_FC_LEN_T} is the default: this uses the
      correct (compiler-dependent) prototypes for Fortran BLAS/LAPACK
      routines called from C/C++, and requires adjustment of many such
      calls -- see \sQuote{Writing R Extensions} §6.6.1.

      %% g++ 11 supported c++23.
      %% 2022-09 Recent \I{LLVM} (>= 13?) and Apple (>= 13?) clang support c++2b.
      \item There is initial support for C++23 as several compilers are
      now supporting \code{-std=c++23} or \code{-std=c++2b} or similar.
      As for C++20, there no additional \command{configure} checks for
      C++23 features beyond a check that the compiler reports a
      \code{__cplusplus} value greater than that in the C++20 standard.
      C++ feature tests should be used.

      \item There is support for a package to indicate the version of
      the C standard which should be used to compile it, and for the
      installing user to specify this.  In most cases \R defaults to the
      C compiler's default standard which is C17 (a `bug-fix' of C11) --
      earlier versions of \R or compilers may have defaulted to C99.

      Current options are:
      \describe{
	\item{USE_C17}{Use a standard that is at most C17.  The
	  intention is to allow legacy packages to still be installed when
	  later C standards become the default, including packages
	  using new keywords as identifiers or with K&R-style function
	  declarations.  This will use C17 if available, falling back
	  to C11.
	}
	\item{USE_C90}{Use the C90 (aka C89) standard.  (As that standard
	  did not require compilers to identify that version, all we can
	  verify is that the compiler does not claim to be using a later
	  standard.  It may accept C99 features -- for example
	  \command{clang} accepts // to make comments.)}
	\item{USE_C99}{Use the C99 standard. This should be rarely
	  needed -- it avoids the few new features of C11/C17 which can
	  be useful if a package assumes them if C17 is specified and
	  they are not implemented.}
	\item{USE_C23}{Use C23 (or in future, later).  Compiler/library
	  support for C23 is still being implemented, but \I{LLVM} clang
	  from 15.0.0 and GCC from 13 have quite extensive support.
	}
      }
      These can be specified as part of the \samp{SystemRequirements}
      field in the package's \file{DESCRIPTION} file or \emph{via}
      options \option{--use-C17} and so on of \command{R CMD INSTALL}
      and \command{R CMD SHLIB}.

      For further details see \dQuote{Writing R Extensions} §1.2.5.

      \item (Windows) A \file{src/Makefile.ucrt} or
      \file{src/Makefile.win} file is now included after
      \file{\var{R_HOME}/etc\var{R_ARCH}/Makeconf} and so no longer
      needs to include that file itself.  Installation of a package with
      such a file now uses a site \file{Makevars} file in the same way
      as a package with a \file{src/Makevars.win} file would.

      \item \command{configure} is now passed crucial variables such as
      \env{CC} and \env{CFLAGS} in its environment, as many packages
      were not setting them (as documented in \sQuote{Writing R
	Extensions} §1.2).

      This has most effect where \command{configure} is used to compile
      parts of the package -- most often by \command{cmake} or
      \command{libtool} which obfuscate the actual compile commands
      used.

      Also used for \command{configure.win} and \command{configure.ucrt}
      on Windows.
    }
  }

  \subsection{FORTRAN Flags}{
    \itemize{
      \item The flag \option{-fno-optimize-sibling-calls} is no longer
      forced for \command{gfortran} 7 and later.  It should no longer be
      needed now using \sQuote{hidden} character-length arguments when
      calling BLAS/LAPACK routines from C/C++ is the default even for
      packages.  (Unless perhaps packages call Fortran code from C/C++
      without using \R{}'s headers and without allowing for these
      arguments.)
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item The deprecated S-compatibility macros \code{DOUBLE_*} in
      \file{R_ext/Constants.h} (included by \file{R.h}) have been
      removed.

      \item The deprecated legacy typedefs of \code{Sint} and
      \code{Sfloat} in header \file{R.h} are no longer defined, and that
      header no longer includes header \file{limits.h} from C nor
      \file{climits} from C++.

      \item New macro \code{CAD5R()} is provided in \file{Rinternals.h}
      and used in a few places in the \R sources.

      \item \I{ALTREP} now supports \code{VECSXP} vectors. Contributed by
      \I{Gabor Csardi} in \PR{17620}.

      \item The \code{Rcomplex} definition (in header
      \file{R_ext/Complex.h}) has been extended to prevent possible
      mis-compilation when interfacing with Fortran (\PR{18430}).  The
      new definition causes compiler warnings with static initializers
      such as \code{\{1, 2\}}, which can be changed to \code{\{.r=1,
	.i=2\}}.

      Using the new definition from C++ depends on compiler extensions
      supporting C features that have not been incorporated into the C++
      standards but are available in \command{g++} and
      \command{clang++}: this may result in C++ compiler warnings but
      these have been worked around for recent versions of common
      compilers (GCC, Apple/\I{LLVM} clang, Intel).

      It is intended to change the inclusion of header
      \file{R_ext/Complex.h} by other \R{} headers, so C/C++ code files
      which make use of \code{Rcomplex} should include that header
      explicitly.
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} does more checking of package \file{.Rd}
      files, warning about invalid email addresses and (some) invalid
      \abbr{URI}s and noting empty \samp{\item} labels in description lists.

      \item \command{R CMD check} now also reports problems when reading
      package news in \abbr{md} (file \file{NEWS.md}) and (optionally) plain
      text (file \file{NEWS}) formats.

      \item \env{_R_CHECK_TIMINGS_} defaults to a value from the
      environment even for \command{R CMD check --as-cran}; this allows
      for exceptionally fast or slow platforms.

      It now applies to checking PDF and HTML versions of the manuals,
      and \sQuote{checking CRAN incoming feasibility}.

      \item \command{R CMD check} can optionally (but included in
      \option{--as-cran}) check whether HTML math rendering \emph{via}
      \I{KaTeX} works for the package \file{.Rd} files.

      \item Non-interactive debugger invocations can be trapped by
      setting the environment variable
      \env{_R_CHECK_BROWSER_NONINTERACTIVE_} to a true value.  This is
      enabled by \command{R CMD check --as-cran} to detect the use of
      leftover \code{browser()} statements in the package.

      \item The use of \code{sprintf} and \code{vsprintf} from C/C++ has
      been deprecated in macOS 13 and is a known security risk.
      \command{R CMD check} now reports (on all platforms) if their use
      is found in compiled code: replace by \code{snprintf} or
      \code{vsnprintf} respectively. [\bold{NB:} whether such calls get
      compiled into the package is platform-dependent.]

      \item Where recorded at installation, \command{R CMD check}
      reports the C and Fortran compilers used to build \R.

      It reports the OS in use (if known, as given by
      \code{osVersion}) as well as that \R was built for.

      It notes if a C++ standard was specified which is older than the
      current default: many packages have used C++11 to mean \sQuote{not
      C++98} --- as C++11 is the minimum supported since \R 4.0.0, that
      specification can probably be removed.

      \item \command{R CMD INSTALL} reports the compilers (and on
      macOS, the \abbr{SDK}) used, and this is copied to the output of
      \command{R CMD check}.

      Where a C++ standard is specified, it is reported.

      \item \command{R CMD check}'s
      \sQuote{\I{checking compilation flags in Makevars}}
      has been relaxed to accept the use of flags such as
      \option{-std=f2008} in \samp{PKG_FFLAGS}.

      \item \code{tools::buildVignettes()} has a new argument \code{skip},
      which is used by \command{R CMD check} to skip (and note)
      vignettes with unavailable \samp{\VignetteDepends} (\PR{18318}).

      \item New generic \code{.AtNames()} added to enable class-specific
      completions after \code{@}. The formerly internal function
      \code{findMatches()} is now exported, mainly for use in methods
      for \code{.DollarNames()} and \code{.AtNames()}.

    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item \code{default.stringsAsFactors()} is defunct.

      \item Calling \code{as.data.frame.<class>()} directly (for 12 atomic
      classes) is going to be formally deprecated, currently activated by
      setting the environment variable
      \env{_R_CHECK_AS_DATA_FRAME_EXPLICIT_METHOD_} to non-empty, which
      also happens in \command{R CMD check --as-cran}.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item Hashed \code{environment}s with sizes less than 5 can now grow.
      (Reported to R-devel by \I{Duncan Garmonsway}.)

      \item \code{as.character(<Rd>, deparse = TRUE)} failed to
      re-escape curly braces in LaTeX-like text.
      (Reported by \I{Hadley Wickham} in \PR{18324}.)

      \item \code{library()} now passes its \code{lib.loc} argument when
      requiring \code{Depends} packages; reported (with fix) in \PR{18331}
      by \I{Mikael Jagan}.

      \item \command{R CMD Stangle}: improved message about \sQuote{Output}
      files.

      \item \code{head(x, n)} and \code{tail(x, n)} now signal an error if
      \code{n} is not numeric, instead of incidentally \dQuote{working}
      sometimes returning all of \code{x}.  Reported and discussed by Colin
      Fay, in \PR{18357}.

      \item The \code{"lm"} method for \code{summary()} now gives the
      correct F-statistic when the model contains an offset.  Reported in
      \PR{18008}.

      \item \code{C()} and \code{`contrasts<-`()} now preserve factor
      level names when given a function object (as opposed a function
      name which did preserve names). Reported in \PR{17616}.

      \item \code{c(a = 1, 2)[[]]} no longer matches \code{2} but rather
      signals a \emph{classed} error.  Reported and analysed by Davis Vaughan in
      \PR{18367}, a duplicate of \PR{18004}, by \I{Jan Meis} \abbr{et al.}
      For consistency, \code{NULL[[]]} is also erroneous now.
      \code{x[[]] <- v} gives an error of the same class \code{"MissingSubscriptError"}.

      \item The \code{relist()} function of \pkg{utils} now supports
      \code{NULL} elements in the skeleton (\PR{15854}).

      \item \code{ordered(levels = *)} (missing \code{x}) now works
      analogously to \code{factor(, ordered=TRUE)}; reported (with fix)
      by \I{Achim Zeileis} in \PR{18389}.

      \item User-defined Rd macro definitions can now span multiple lines,
      thanks to a patch from Duncan Murdoch. Previously, the Rd parser
      silently ignored everything after the first line.

      \item Plain-text help (\code{tools::Rd2txt()}) now preserves an
      initial blank line for text following description list items.

      \item \code{tools::Rd2HTML()} and \code{tools::Rd2latex()} no
      longer split \verb{\arguments} and \verb{\value} lists at Rd comments.

      \item \code{tools::Rd2latex()} now correctly handles optional text
      outside \verb{\item}s of argument lists as well as bracketed text
      at the beginning of sections, e.g., \verb{\value{[NULL]}}.

      \item \code{as.character(<POSIXt>)} now behaves more in line with the
      methods for atomic vectors such as numbers, and is no longer
      influenced by \code{options()}.
      Ditto for \code{as.character(<Date>)}.
      The \code{as.character()} method gets arguments \code{digits} and \code{OutDec}
      with defaults \emph{not} depending on \code{options()}.
      Use of \code{as.character(*, format = .)} now warns.

      \item Similarly, the \code{as.character.hexmode()} and
      \code{*.octmode()} methods also behave as \code{good citizen}
      methods and back compatibility option \code{keepStr = TRUE}.

      \item The \code{as.POSIXlt(<POSIXlt>)} and
      \code{as.POSIXct(<POSIXct>)} default methods now do obey their
      \code{tz} argument, also in this case.

      \item \code{as.POSIXlt(<Date>)} now does apply a \code{tz} (time
      zone) argument, as does \code{as.POSIXct()}; partly suggested by
      \I{Roland Fuß} on the R-devel mailing list.

      \item \code{as.Date.POSIXlt(x)} now also works when the list components
      are of unequal length, aka \dQuote{partially filled} or \dQuote{ragged}.

      \item \code{expand.model.frame()} looked up variables in the wrong
      environment when applied to models fitted without \code{data}.
      Reported in \PR{18414}.

      \item \code{time()} now (also) uses the
      \code{ts.eps = getOption("ts.eps")}
      argument and thus by default rounds values very close to the start (or
      end) of a year.  Based on a proposal by \I{Andreï V. Kostyrka} on R-help.

      \item Printing of a \code{factanal()} result with just one factor and
      \code{sort = TRUE} now works regularly, fixing \PR{17863} by Timothy
      Bates, thanks to the \sQuote{R Contributors} working group.

      \item Printing 0-length objects of class
      \code{"factor"}, \code{"roman"}, \code{"hexmode"},
      \code{"octmode"}, \code{"person"}, \code{"bibentry"}, or
      \code{"citation"} now prints something better, one
      of which fixes \PR{18422}, reported by \I{Benjamin Feakins}.

      \item \code{Sys.timezone()} queries \command{timedatectl} only if
      \command{systemd} is loaded; addressing a report by \I{Jan Gorecki} in
      \PR{17421}.

      \item The formula method of \code{cor.test()} had scoping problems
      when \code{environment(formula)} was not the calling environment;
      reported with a patch proposal by \I{Mao Kobayashi} in \PR{18439}.

      \item \code{attach()} of an environment with active bindings now
      preserves the active bindings.  Reported by \I{Kevin Ushey} in
      \PR{18425}.

      \item BLAS detection now works also with system-provided libraries not
      available as regular files.  This fixes detection of the Accelerate
      framework on macOS since \I{Big Sur}.  Reported by \I{David Novgorodsky}.

      \item \code{download.file()} gives a helpful error message in case of
      an invalid \code{download.file.method} option, thanks to Colin Fay's
      report in \PR{18455}.

      \item Sporadic crashes of \command{Rterm} when using completion have
      been fixed.

      \item \code{Rprof()} is now more reliable.  A livelock in thread
      initialization with too short sampling interval has been fixed on
      macOS.  A deadlock in using the C runtime has been fixed on Windows.
      A potential deadlock has been prevented on Unix.

      \item Cursor placement in \command{Rgui} now works even after a
      fixed-width font is selected.

      \item Mandatory options (\code{options()}) are now set on startup so
      that saving and restoring them always works (\PR{18372}).

      \item Package installation, \command{R CMD INSTALL} or \code{install.packages(*)},
      now parses each of the \file{<pkg>/R/*.R} files individually instead
      of first concatenating and then \I{\code{parse()}ing} the large resulting
      file.  This allows parser or syntax errors to be diagnosed with
      correct file names and line numbers, thanks to \I{Simon Dedman}'s report
      and Bill Dunlap's patch in \PR{17859}.

      This \emph{does} require syntactically self contained R source
      files now, fixing another inadvertent bug.

      \item \code{predict.lm(<model with offset>)} now finds the offset in
      the correct environment, thanks to \I{André Gillibert}'s report and patch
      in \PR{18456}.

      \item \code{getInitial(<formula>)} now finds the \code{selfStart}
      model in the correct environment.
      (Reported by \I{Ivan Krylov} in \PR{18368}.)

      \item Fix for possible segfault when using recently-added graphics
      features, such as gradients, clipping paths, masks, and groups with
      \code{pdf(file=NULL)}.

      \item \code{class(m) <- class(m)} no longer changes a matrix \code{m}
      by adding a class \emph{attribute}.

      \item \code{packageDate(pkg)} now only warns once if there is no \code{pkg}.

      \item When \code{ts()} creates a multivariate time series,
      \code{"mts"}, it also inherits from \code{"array"} now, and
      \code{is.mts()} is documented \emph{and} stricter.

      \item \code{Rd2txt()} now preserves line breaks of \verb{\verb} Rd
      content and from duplicated \verb{\cr}.  The former also
      fixes the rendering of verbatim output from Rd
      \verb{\Sexpr} in plain-text help.

      \item \code{uniroot(f, interval)} should no longer wrongly converge
      \emph{outside} the interval in some cases where \code{abs(f(x)) == Inf}
      for an \code{x} at the interval boundary, thanks to posts by
      \I{Ben Bolker} and \I{Serguei Sokol} on R-devel.

      \item Vectorized alpha handling in palette functions such as in
      \code{gray()}, \code{rainbow()}, or \code{hcl.colors()} works
      correctly now, thanks to \I{Achim Zeileis}' report and patch in
      \PR{18476}.

      \item Formatting and \I{\code{print()}ing} of \code{bibentry} objects has
      dropped the deprecated \code{citation.bibtex.max} argument, such that
      the \code{bibtex} argument's default for \code{print.bibentry()}
      depends directly on the \code{citation.bibtex.max} option, whereas in
      \code{format.bibentry()} the option no longer applies.

      \item Attempting to use a character string naming a foreign
      function entry point in a foreign function call in a package will
      now signal an error if the packages has called
      \code{R_forceSymbols} to specify that symbols must be
      used.

      \item An error in \code{table()} could permanently set
      \code{options(warn=2)} promoting all subsequent warnings to errors.

      \item The \code{sigma()} function gave misleading results for
      binary GLMs.  A new method for objects of class \code{"glm"} returns the
      square root of the estimate of the dispersion parameter using the
      same calculation as \code{summary.glm()}.

      \item \code{bs()} and \code{ns()} in the (typical) case of automatic
      knot construction, when some of the supposedly inner knots coincide
      with boundary knots, now moves them inside (with a warning), building
      on \PR{18442} by \I{Ben Bolker}.

      \item \command{R CMD} on Windows now skips the site profile with
      \option{--no-site-file} and \option{--vanilla} even when
      \env{R_PROFILE} is set (\PR{18512}, from \I{Kevin Ushey}).
    }
  }
}

\section{\Rlogo Changes in R 4.2.3}{
  \subsection{C-Level Facilities}{
    \itemize{
      \item The definition of \code{DL_FUNC} in \file{R_ext/Rdynload.h}
      has been changed to be fully C-compliant.  This means that
      functions loaded \emph{via} for example \code{R_GetCCallable} need
      to be cast to an appropriate type if they have any arguments.

      \item \code{.Machine} has a new element \code{sizeof.time_t} to
      identify old systems with a 32-bit type and hence a limited range
      of date-times (and limited support for dates millions of years
      from present).
    }
  }

  \subsection{Package Installation}{
    \itemize{
      \item (Windows) The default C++ standard had accidentally been
      left at C++11 when it was changed to C++14 on Unix.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item As \code{"POSIXlt"} objects may be \dQuote{partially filled}
      and their list components meant to be recycled, \code{length()} now
      is the length of the longest component.

      \item \code{as.POSIXlt.Date()} could underflow for dates in the
      far past (more than half a million years \abbr{BCE}).

      \item \code{as.Date.POSIXlt(x)} would return \code{"1970-01-01"}
      instead of \code{NA} in R 4.2.2, e.g., for \preformatted{
	x <- as.POSIXlt(c("2019-01-30","2001-1-1"))
	x$mon <- c(0L, NA); as.Date(x)}

      \item \command{R CMD check} failed to apply enabled
      \env{_R_CHECK_SUGGESTS_ONLY_} to examples and vignettes
      (regression in \R 4.2.0).

      \item \command{R CMD check} did not re-build vignettes in
      separate processes by default (regression in \R 4.2.0).

      \item Running examples from HTML documentation now restores
      previous \pkg{knitr} settings and options (\PR{18420}).

      \item Quartz: fonts are now located using Core Graphics API
      instead of deprecated ATS which is no longer supported in the
      macOS 13 \abbr{SDK} (\PR{18426}).  This also addresses an issue where
      the currently used font in the Quartz device context was not
      correctly retained.

      \item (Windows) Math symbols in text drawing functions are again
      rendered correctly (\PR{18440}).  This fixes a regression in \R 4.2.1
      caused by a fix in \PR{18382} which uncovered an issue in \I{GraphApp}
      due to which the symbol \abbr{charset} was not used with \I{TT Symbol} font face.

      \item (Windows) Installing a package with a
      \file{src/Makefile.\{win,ucrt\}} file includes
      \file{~/.R/Makevars.win64} in the search for user \I{makevars}, as
      documented in \dQuote{R Installation and Administration} and done
      for packages with a \file{src/Makevars.\{win,ucrt\}} file.

      \item \code{format(<POSIXlt_w/_unbalanced_sec>, "....\%OS<n>")} with
      \eqn{n > 0} no longer accidentally uses the unbalanced seconds,
      thanks to \I{Suharto Anggono}'s report (including patch) in \PR{18448}.

      \item \code{solve.default(a, b)} works around issues with
      some versions of LAPACK when \code{a} contains \code{NA} or
      \code{NaN} values.

      \item When \code{UseMethod()} cannot dispatch, it no longer segfaults
      producing the error message in case of a long \code{class()}, thanks to
      \I{Joris Vankerschaver}'s report (including patch) in \PR{18447}.

      \item When \code{example(foo, ..)} produces graphics on an interactive
      device it needs to open itself, it now leaves \code{devAskNewPage()}
      unchanged even when it was \code{FALSE}, thus fixing a 14 years old
      \sQuote{\I{FIXME}}.

      \item \code{packageDescription()} again catches errors from encoding
      conversions. This also fixes broken \code{packageVersion()} in
      C locale on systems where \code{iconv} does not support transliteration.
    }
  }
}

\section{\Rlogo Changes in R 4.2.2}{
  \subsection{New Features}{
    \itemize{
      \item \code{tools::Rdiff(useDiff = TRUE)} checks for the presence
      of an external \command{diff} command and switches to
      \code{useDiff = FALSE} if none is found.
      This allows \command{R CMD Rdiff} to always work.

      \item On Windows, environment variable
      \env{R_LIBCURL_SSL_REVOKE_BEST_EFFORT} can be used to switch to
      only \sQuote{best-effort} \abbr{SSL} certificate revocation checks with
      the default \code{"libcurl"} download method.  This reduces
      security, but may be needed for downloads to work with \abbr{MITM}
      proxies (\PR{18379}).

      \item (macOS) The run-time check for libraries from \I{XQuartz} for
      X11 and Tcl/Tk no longer uses \code{otool} from the Apple
      Developer Tools (\PR{18400}).

      \item The \LaTeX style for producing the PDF manuals, \file{Rd.sty},
      now loads the standard \samp{amsmath}, \samp{amsfonts} and
      \samp{amssymb} packages for greater coverage of math commands in
      the Rd \verb{\eqn} and \verb{\deqn} macros.
      The \verb{\mathscr} \LaTeX command is also provided (via the
      \samp{mathrsfs} package, if available, or the \samp{amsfonts}
      bundle otherwise), fulfilling the wish of \PR{18398}.

      \item (Windows) The default format of \code{readClipboard()} and
      \code{writeClipboard()} has been changed to \code{13}
      (\code{CF_UNICODETEXT}).
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item The PDF manuals (if built) can be compacted by the new
      target \command{make compact-pdf} (at the top level or in
      directory \file{doc/manual}).

      \item There is now \command{configure} support for \I{LLVM} clang 15
      on Linux, which defaults to position-independent (PIE) executables
      whereas \command{gfortran} does not.

      \item Many small changes to ease compilation (and suppress
      warnings) with \I{LLVM} \command{clang} 15.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{Rscript -e} would fail if \file{stdin} were closed
      (Reported by \I{Henrik Bengtsson}.)

      \item \code{qt(*, log.p=TRUE)} in outer tails no longer produces
      \code{NaN} in its final steps, thus fixing \PR{18360}.

      \item \code{tools::Rd2latex()} now escapes hashes and ampersands
      when writing URLs, fixing LaTeX errors with such URLs in \verb{\tabular}.

      \item When \code{isGeneric(f, fdef=*)} is used with mismatching
      names, the warning is better understandable; reported (with fix) in
      \PR{18370} by \I{Gabe Becker}.

      \item \code{poly(x, n)} now works again (and is now documented)
      when \code{x} is a \code{"Date"} or \code{"POSIXct"} object, or of
      another class while fulfilling \code{mode(x) == "numeric"}.  This
      also enables \code{poly(x, *, raw=TRUE)} for such variables.
      Reported by Michael Chirico to R-devel.

      \item \code{write.table()}, \code{write.csv()} and
      \code{write.csv2()} restore their numerical precision (internal
      equivalent of \code{digits = 15}) after an interrupt (\PR{18384}).

      \item One can now read also byte \code{FF} from a clipboard connection
      (\PR{18385}).

      \item \code{source("")} and \code{source(character())} now give more
      helpful error messages.

      \item \command{R CMD check --as-cran} set \env{_R_CHECK_TIMINGS_}
      too late to have the intended effect.

      \item \code{as.POSIXlt(x)} now also works with very large dates
      \code{x}, fixing \PR{18401} reported by \I{Hannes Mühleisen}.

      \item Files can now be extracted even from very large zip archives
      (\PR{18390}, thanks to \I{Martin Jakt}).

      \item Non-finite objects of class \code{"POSIXlt"} are now
      correctly coerced to classes \code{"Date"} and \code{"POSIXct"};
      following up on the extension to \code{format()} them correctly.

      \item Added methods for \code{is.finite()}, \code{is.infinite()}
      and \code{is.nan()} for \code{"POSIXlt"} date-time objects.
    }
  }

  \subsection{Bug Fixes (Windows)}{
    \itemize{
     \item Non-ASCII characters are now properly displayed on Windows
      in windows created using \I{GraphApp} via
      e.g.\sspace{}\code{winDialogString} thanks to a workaround for an
      at least surprising Windows behavior with UTF-8 as the system
      encoding (\PR{18382}).

      \item Find and replace operations work again in the script editor in
      \command{Rgui} on Windows.

      \item Computation of window size based on requested client size in
      \I{GraphApp} when running in a multi-byte locale on Windows has been fixed
      (regression in \R 4.2.0 for users of systems where \R 4.1 used a
      single-byte locale).  \command{Rgui} again respects the number of
      console rows and columns given in \file{Rconsole} file.

      \item \command{Rterm} support for \code{Alt+xxx} sequences has been
      fixed to produce the corresponding character (only) once. This fixes
      pasting text with tilde on Italian keyboard (\PR{18391}).
    }
  }
}

\section{\Rlogo Changes in R 4.2.1}{
  \subsection{New Features}{
    \itemize{
      \item New function \code{utils::findCRANmirror()} to find out if a
      \abbr{CRAN} mirror has been selected, otherwise fallback to
      the main site.  This behaves in the same way as
      \code{tools::CRAN_package_db()} and is intended for packages
      wishing to access \abbr{CRAN} for purposes other than
      installing packages.

      The need for this was shown by a day when the main \abbr{CRAN}
      website was offline and a dozen or so packages which had its URL
      hardcoded failed their checks.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item The libraries searched for by \option{--with-blas} (without
      a value) now include \I{BLIS} (after \I{OpenBLAS} but before ATLAS).  And
      on macOS, the Accelerate framework (after ATLAS).  (This is
      patterned after the \code{AX_BLAS} macro from the \I{Autoconf} Archive.)

      \item The included LAPACK sources have been updated to 3.10.1.
    }
  }
  \subsection{Utilities}{
    \itemize{
      \item The (full path to) the command \command{tidy} to be used for
      HTML validation can be set by environment variable \env{R_TIDYCMD}.

      \item Setting environment variable
      \env{_R_CHECK_RD_VALIDATE_RD2HTML_} to a false value will override
      \command{R CMD check --as-cran} and turn off HTML validation.
      This provides a way to circumvent a problematic \command{tidy}.

      The 2006 version that ships with macOS is always skipped.
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item The undocumented legacy declarations of \code{Sint},
      \code{Sfloat}, \code{SINT_MAX} and \code{SINT_MIN} in header
      \file{R.h} are deprecated.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{fisher.test(d)} no longer segfaults for \dQuote{large}
      \code{d}; fixing \PR{18336} by preventing/detecting an integer
      overflow reliably.

      \item \code{tar(., files=*)} now produces correctly the warning
      about invalid \abbr{UID} or \abbr{GID} of files, fixing \PR{18344}, reported by
      Martin Morgan.

      \item \code{tk_choose.files()} with \code{multi = FALSE}
      misbehaved on paths containing spaces (\PR{18334}) (regression
      introduced in \R 4.0.0).

      \item \code{sort(x, partial = ind, *)} now works correctly notably for
      the non-default \code{na.last = FALSE} or \code{TRUE}, fixing
      \PR{18335} reported by James Edwards.

      \item Environment variable \env{_R_CHECK_XREFS_REPOSITORIES_} is
      only used for checking \file{.Rd} cross-references in \command{R
      CMD check} (as documented) and not for other uses looking for a
      \abbr{CRAN} mirror.

      \item The search for a \abbr{CRAN} mirror when checking
      packages now uses \code{getOption("repos")} if that specifies a
      \abbr{CRAN} mirror, even when it does not also specify all three
      Bioconductor repositories (as was previously required).

      \item The \acronym{HTML} code generated by \code{tools::Rd2HTML()}
      has been improved to pass \command{tidy} 5.8.0.
    }
  }

  \subsection{Bug Fixes (Windows)}{
    \itemize{
      \item Writing to a clipboard connection works again, fixing a
      regression in \R 4.2.0 (\PR{18332}).  Re-using a closed clipboard
      connection no longer issues a spurious warning about an ignored
      encoding argument.

      \item C function \code{getlocale} no longer attempts to query an
      unsupported category from the OS, even when requested at R level,
      which may cause crashes when \R 4.2.0 (which uses \abbr{UCRT}) is
      embedded (reported by \I{Kevin Ushey}).

      \item Accent keys now work in \I{GraphApp} Unicode windows, which are
      used by \command{Rgui} whenever running in a multibyte locale (so
      also in UTF-8, hence fixing a regression in \R 4.2.0 for users of
      systems where \R 4.1 used a single-byte locale).

      \item Completion in \command{Rgui} now works also with
      non-ASCII characters.

      \item \command{Rgui} no longer truncates usage information with
      \option{--help}.

      \item Text injection from external applications via
      \code{SendInput} now works in \I{GraphApp} Unicode windows, fixing a
      regression in \R 4.2.0 for \command{Rgui} users of systems where
      \R 4.1 used a single-byte locale but \R 4.2.0 uses UTF-8.

      \item Performance of \code{txtProgressBar()} in \command{Rgui} when
      running in a multi-byte locale has been improved (fixing a
      performance regression in \R 4.2.0 for users of systems where \R
      4.1 used a single-byte locale).

      \item The script editor in \command{Rgui} now works also on
      systems using UTF-8 as the native encoding.  Users of the script
      editor have to convert their scripts with non-ASCII characters to
      UTF-8 before reading them in \R 4.2.1 or newer (on recent Windows
      where UTF-8 is used).  This fixes a regression in \R 4.2.0, which
      prevented some operations with scripts when they contained
      non-ASCII characters.
    }
  }
}

\section{\Rlogo Changes in R 4.2.0}{
  \subsection{Significant User-Visible Changes}{
    \itemize{
      \item The \code{formula} method of \code{aggregate()} now matches
      the generic in naming its first argument \code{x} (resolving
      \PR{18299} by \I{Thomas Soeiro}).

      This means that calling \code{aggregate()} with a formula as a
      named first argument requires name \code{formula} in earlier
      versions of \R and name \code{x} now, so portable code should not
      name the argument (code in many packages did).

      \item Calling \code{&&} or \code{||} with either argument of
      length greater than one now gives a warning (which it is intended
      will become an error).

      \item Calling \code{if()} or \code{while()} with a condition of
      length greater than one gives an error rather than a warning.
      Consequently, environment variable
      \env{_R_CHECK_LENGTH_1_CONDITION_} no longer has any effect.

      \item Windows users should consult the Windows section below for
      some profound changes including
      \itemize{
	\item Support for 32-bit builds has been dropped.
	\item UTF-8 locales are used where available.
	\item The default locations for the \R installation and personal
	library folder have been changed.
      }

      Thanks to \I{Tomas Kalibera} for months of work on the Windows port
      for this release.
    }
  }

  \subsection{New Features}{
    \itemize{
      \item \code{matrix(x, n, m)} now warns in more cases where
      \code{length(x)} differs from \code{n * m}, as suggested by
      \I{Abby Spurdle} and \I{Wolfgang Huber} in Feb 2021 on the R-devel
      mailing list.

      This warning can be turned into an error by setting environment
      variable \env{_R_CHECK_MATRIX_DATA_} to \samp{TRUE}: \command{R
	CMD check --as-cran} does so unless it is already set.

      \item Function \code{file_test()} in package \pkg{utils} gains
      tests for symlinks, readability and writability.


      \item \code{capabilities("libxml")} is now false.

      The description of \code{capabilities("http/ftp")} now reflects
      that it refers to the default method, no longer the internal one.

      \item \code{simplify2array()} gains an \code{except} argument for
      controlling the exceptions used by \code{sapply()}.

      \item Environment variables \env{R_LIBS_USER} and
      \env{R_LIBS_SITE} are both now set to the \R system default if
      unset or empty, and can be set to \code{NULL} to indicate an empty
      list of user or site library directories.

      \item The warning for \code{axis()}(-like) calls in cases of relatively
      small ranges (typically in log-scale situations) is slightly improved
      \emph{and} suppressed from explicit calls to \code{.axisPars()} as
      has always been the intention.

      \item The \code{contrasts} setter function \code{`contrasts<-`}
      gains an explicit default \code{how.many = NULL} rather than just
      using \code{missing(how.many)}.

      \item \code{grid.pretty()} gains a new optional argument \code{n = 5}.

      \item There is a new function \code{.pretty()} with option
      \code{bounds} as a technical-utility version of \code{pretty()}.  It
      and \code{pretty()} gain a new argument \code{f.min} with a better
      than back-compatible default.

      \item Function \code{grDevices::axisTicks()} and related functions
      such as \code{graphics::axis()} work better, notably for the log
      scale; partly because of the \code{pretty()} improvements, but also
      because care is taken e.g., when \code{ylim} is finite but
      \code{diff(ylim)} is infinite.

      \item \code{nclass.FD()} gains a \code{digits} option.

      \item The R \I{Mathlib} internal C function \code{bd0()} (called
      indirectly from a dozen probability density and distribution
      functions such as \code{dpois()}, \code{dbinom()},
      \code{dgamma()}, \code{pgamma()} \emph{etc}) has been complemented
      by a more sophisticated and (mostly) more accurate C function
      \code{ebd0()}, currently called only by internal
      \code{dpois_raw()} improving accuracy for \R level \code{dpois()}
      and potentially others calling it such as \code{dnbinom()},
      \code{dgamma()} or \code{pgamma()}.  (Thanks to \I{Morten Welinder}'s
      \PR{15628}.)

      \item \code{write.ftable()} gains \code{sep = " "} argument as
      suggested by \I{Thomas Soeiro}.

      \item The names of the locale categories supported by \R's
      \code{Sys.getlocale()} and \code{Sys.setlocale()} are now provided
      by variable \code{.LC.categories} in the \code{base} namespace.

      \item The \code{Date} and \code{POSIXt} methods for \code{hist()}
      and the \code{histogram} method for \code{plot()} now also use the
      new default \code{col = "lightgray"} in consistency with the
      corresponding change to \code{hist()}'s default for \R 4.0.0.

      \item \code{hist.default()} gains new \code{fuzz} argument, and the
      histogram \code{plot} method no longer uses fractional axis ticks
      when displaying counts (\code{"Frequency"}).

      \item \code{mapply()} and hence \code{Map()} now also obey the
      \dQuote{max-or-0-if-any} recycling rule, such that, e.g.,
      \code{Map(`+`, 1:3, 1[0])} is valid now.

      \item \code{as.character(<obj>)} for \code{"hexmode"} or
      \code{"octmode"} objects now fulfils the important basic rule
      \code{as.character(x)[j] === as.character(x[j])}.

      \item The set utility functions, notably \code{intersect()} have been
      tweaked to be more consistent and symmetric in their two set
      arguments, also preserving a common \code{mode}.

      \item \code{substr(ch, start,end) <- new} now e.g., preserves
      \code{names(ch)}; ditto for \code{substring()}, thanks to a patch
      from \I{Brodie Gaslam}.

      \item \code{plot(<lm>)} gains a \code{extend.ylim.f} argument, in
      partial response to \PR{15285}; further \PR{17784} is fixed thanks to
      several contributors and a patch by \I{Elin Waring}.
      The Cook's dist contours get customizable via \code{cook.col} and
      \code{cook.lty} with a different default color and their legend is
      nicer by default and customizable via \code{cook.legendChanges}.

      \item Attempting to subset an object that is not \I{subsettable} now
      signals an error of class \code{notSubsettableError}. The
      non-\I{subsettable} object is contained in the \code{object} field of
      the error condition.

      \item Subscript-out-of-bounds errors are now signaled as errors of
      class \code{subscriptOutOfBoundsError}.

      \item Stack-overflow errors are now signaled as errors inheriting
      from class \code{stackOverflowError}. See
      \code{?stackOverflowError} for more details.

      \item New partly experimental \code{Sys.setLanguage()} utility,
      solving the main problem of \PR{18055}.

      \item \code{gettext()} and \code{gettextf()} get a new option
      \code{trim = TRUE} which when set to false allows translations for
      strings such as \code{"Execution halted\n"} typical for C code.

      \item An experimental implementation of hash tables is now
      available.  See \code{?hashtab} for more details.

      \item \code{identical()} gains a \code{extptr.as.ref} argument for
      requesting that external pointer objects be compared as reference
      objects.

      \item \code{reorder()} gets an argument \code{decreasing} which it
      passes to \code{sort()} for level creation; based on the wish and
      patch by \I{Thomas Soeiro} in \PR{18243}.

      \item \code{as.vector()} gains a \code{data.frame} method which
      returns a simple named list, also clearing a long-standing
      \sQuote{\I{FIXME}} to enable \code{as.vector(<data.frame>,
      mode="list")}.  This breaks code relying on
      \code{as.vector(<data.frame>)} to return the unchanged data frame.

      \item \code{legend()} is now vectorized for arguments \code{cex},
      \code{x.intersp}, and \code{text.width}.
      The latter can now also be specified as a vector (one element for
      each column of the legend) or as \code{NA} for computing a proper
      column wise maximum value of \code{strwidth(legend)}.
      The argument \code{y.intersp} can be specified as a vector with
      one entry for each row of the legend.

      \code{legend()} also gains new arguments \code{title.cex} and
      \code{title.font}.
      Thanks to \I{Swetlana Herbrandt}.

      \item Deparsing no longer remaps attribute names \code{dim},
      \code{dimnames}, \code{levels}, \code{names} and \code{tsp} to
      historical S-compatible names (which \code{structure()} maps back).

      \item \code{sample()} and \code{sample.int()} have additional
      sanity checks on their \code{size} and \code{n} arguments.

      \code{all.equal.numeric()} gains a sanity check on its
      \code{tolerance} argument -- calling \code{all.equal(a, b, c)} for
      three numeric vectors is a surprisingly common error.

      \code{mean(na.rm =)}, \code{rank(na.last =)},
      \code{barplot(legend.text =)}, \code{boxplot()},
      \code{contour(drawlabels =)}, \code{polygon(border =)} and
      \code{methods::is(class2 =)} have more robust sanity checks on
      their arguments.

      \command{R CMD Rd2pdf} (used by \command{R CMD check}) has a more
      robust sanity check on the format of \code{\\alias{}} commands.

      \item \code{psigamma(x, deriv)} for negative \code{x} now also works
      for \code{deriv = 4} and \code{5}; their underlying C level
      \code{dpsifn()} is documented in \sQuote{Writing R Extensions}.

      \item The HTML help system now uses HTML5 (wish of \PR{18149}).

      \item \code{ks.test()} now provides exact p-values also with ties
      and MC p-values in the two-sample (Smirnov) case.
      By \I{Torsten Hothorn}.

      \item \code{ks.test()} gains a formula interface, with \code{y ~ 1}
      for the one-sample (Kolmogorov) test and \code{y ~ group} for the
      two-sample (Smirnov) test.  Contributed by \I{Torsten Hothorn}.

      \item The return value from \code{ks.test()} now has class
      \code{c("ks.test", "htest")} -- packages using \code{try()} need
      to take care to use \code{inherits()} and not \code{==} on the class.

      \item New functions \code{psmirnov()}, \code{qsmirnov()} and
      \code{rsmirnov()} in package \pkg{stats} implementing the
      asymptotic and exact distributions of the two-sample Smirnov statistic.

      \item \code{iconv()} now allows \code{sub = "c99"} to use C99-style
      escapes for UTF-8 inputs which cannot be converted to encoding \code{to}.

      \item In a forward pipe \code{|>} expression it is now possible to
      use a named argument with the placeholder \code{_} in
      the \code{rhs} call to specify where the \code{lhs} is to be
      inserted.  The placeholder can only appear once on the \code{rhs}.

      \item The included LAPACK sources have been updated to version 3.10.0,
      except for the four Fortran 77 routines which 3.10.0 has
      re-implemented in Fortran 90 (where the older versions have been
      retained as the \R build process does not support Fortran 90).

      \item \code{path.expand()} and most other uses of tilde expansion now
      warn if a path would be too long if expanded.  (An exception is
      \code{file.exists()}, which silently returns false.)

      \item \code{trunc(<Date>, *)} now supports \code{units = "months"}
      or \code{"years"} for consistency with the \code{POSIXt} method,
      thanks to \I{Dirk Eddelbuettel}'s proposal in \PR{18099}.

      \item \code{list2DF()} now checks that its arguments are of the
      same length, rather than use recycling.

      \item The HTML help system has several new features: LaTeX-like
      math can be typeset using either \href{https://katex.org/}{\I{KaTeX}}
      or \href{https://www.mathjax.org/}{\I{MathJax}}, usage and example
      code is highlighted using \href{https://prismjs.com}{Prism}, and
      for dynamic help the output of examples and demos can be shown
      within the browser if the \CRANpkg{knitr} package is
      installed. These features can be disabled by setting the
      environment variable \code{_R_HELP_ENABLE_ENHANCED_HTML_} to a
      false value.

    }
  }

  \subsection{Graphics}{
    \itemize{
      \item The graphics engine version, \code{R_GE_version}, has been
      bumped to \code{15} and so packages that provide graphics devices
      should be reinstalled.

      \item The \pkg{grid} package now allows the user to specify a
      \dQuote{vector} of pattern fills.  The \code{fill} argument
      to \code{gpar()} accepts a list of gradients and/or patterns and
      the functions \code{linearGradient()}, \code{radialGradient()},
      and \code{pattern()} have a new \code{group} argument.

      Points grobs (data symbols) can now also have a pattern fill.

      The \code{grobCoords()} function now returns a more informative
      and complex result.

      \item The \pkg{grid} package has new functions for drawing
      isolated groups: \code{grid.group()}, \code{grid.define()}, and
      \code{grid.use()}.  These functions add compositing operators and
      affine transformations to R's graphics capabilities.

      The \pkg{grid} package also has new functions for stroking
      and filling paths:  \code{grid.stroke()}, \code{grid.fill()},
      and \code{grid.fillStroke()}.

      A new function \code{as.path()} allows the user to specify the
      fill rule for a path that is to be used for clipping, stroking, or
      filling; available options are \code{"winding"} and
      \code{"evenodd"}.  A new function \code{as.mask()} allows the user
      to specify the type of a mask; available options are
      \code{"alpha"} and \code{"luminance"}.

      These new features are only supported so far (at most) on the
      Cairo-based graphics devices and on the \code{pdf()} device.

      \item \code{dev.capabilities()} reports on device support
      for the new features.

      \item \code{par()} now warns about unnamed non-character arguments
      to prevent misuse such as \code{{usr <- par("usr"); par(usr)}}.
    }
  }

  \subsection{Windows}{
    \itemize{
      \item \R uses UTF-8 as the native encoding on recent Windows
      systems (at least Windows 10 version 1903, Windows Server 2022 or
      Windows Server 1903).  As a part of this change, R uses \abbr{UCRT} as
      the C runtime.  \abbr{UCRT} should be installed manually on systems older
      than Windows 10 or Windows Server 2016 before installing \R.

      \item The default personal library on Windows, folder
      \file{R\\win-library\\x.y} where \file{x.y} stands for \R release
      \file{x.y.z}, is now a subdirectory of Local Application Data
      directory (usually a hidden directory
      \file{C:\\Users\\username\\AppData\\Local}).  Use
      \code{shell.exec(.libPaths()[1])} from \R to open the personal
      library in Explorer when it is first in the list (\PR{17842}).

      \item \R uses a new 64-bit Tcl/Tk bundle.  The previous
      32-bit/64-bit bundle had a different layout and can no longer be
      used.

      \item Make files and installer scripts for Windows have been
      tailored to \file{Rtools42}, the newly recommended 64-bit
      \command{gcc} 10.3 \I{MinGW-W64} \abbr{UCRT} toolchain.

      \item \file{Rtools42} by default uses the Windows security
      features \I{ASLR} and \I{DEP}; hence \abbr{CRAN} builds of \R and packages also
      do.

      \item \R now supports files \file{Makevars.ucrt},
      \file{Makefile.ucrt}, \file{configure.ucrt} and
      \file{cleanup.ucrt} in packages, which are used in preference to
      the \file{.win} variants.  This allows keeping the \file{.win}
      files around to support older versions of \R.  This feature will
      be removed in the future once support for older versions of \R
      would no longer be needed.

      \item \code{R.version} gains a new field \code{crt} (only on
      Windows) to denote the C runtime.  The value is \code{"ucrt"}.

      \item On Windows, \code{download.file(method = "auto")} and
      \code{url(method = "default")} now follow Unix in using
      \code{"libcurl"} for all except \samp{file://} \abbr{URI}s.

      \item \file{Rtools42} includes an unpatched \I{Msys2} build of GNU
      \command{tar}.  Paths including drive letters can be made to work
      by adding \option{--force-local} to environment variable
      \env{TAR_OPTIONS}.  (\file{Rtools40} and earlier included a
      patched version which defaulted to this option.)

      \item Installer builds of \R automatically find the
      \file{Rtools42} software collection as well as the compiler
      toolchain.  No \env{PATH} setting is required from the user.

      \item The default installation directory of R for a user-only
      installation has been changed to the User Program Files directory
      (usually a hidden directory
      \file{C:\\Users\\username\\AppData\\Local\\Programs}) to follow
      Windows conventions.  Use \code{shell.exec(R.home())} from \R{} to
      open the \R installation directory in Explorer (\PR{17842}).

      \item \R now supports installation-time patching of packages.
      Patches may be installed from a supplied URL or a local directory
      or disabled.  Patches are included into the installed packages for
      reference.  This experimental feature may be removed in the
      future.

      \item \code{libcurl} is now required for building from source.

      \item The clipboard connection now works also with text in other
      than the current native encoding (\PR{18267}, with
      \I{Hiroaki Yutani}).  Text is always pasted to the clipboard  in
      UTF16-LE and the \code{encoding} argument is ignored.

      \item The internal case-changing functions are now used by default
      on Windows -- this circumvents problems (for example with E acute)
      of the \abbr{UCRT} Windows' runtime.

      \item \R on Windows now uses the system memory allocator.  Doug
      Lea's allocator was used since \R 1.2.0 to mitigate performance
      limitations seen with system allocators on earlier versions of
      Windows.

      \item \code{memory.limit()} and \code{memory.size()} are now stubs on
      Windows (as on Unix-alikes).

      \item Applications embedding \R on Windows can now use additional
      callbacks, which have so far only been available only on Unix
      (\PR{18286}).
    }
  }


  \subsection{Installation}{
    \itemize{
      \item Facilities for accessing \samp{ftp://} sites are no longer
      tested (except \emph{\I{pro tem}} for \code{curlGetHeaders()}) as modern
      browsers have removed support.
      %% Chrome and Firefox did in early 2021: Safari and Edge never had it.

      \item \R can now be built with \samp{DEFS = -DSTRICT_R_HEADERS} .
    }
  }


  \subsection{Package Installation}{
    \itemize{
      \item \command{R CMD INSTALL} no longer tangles vignettes. This
      completes an \command{R CMD build} change in \R 3.0.0 and affects
      packages built before \R 3.0.2. Such packages should be re-made
      with \command{R CMD build} to have the tangled \R code of vignettes
      shipped with the tarball.

      \item \code{USE_FC_LEN_T} will become the default: this uses the
      correct prototypes for Fortran BLAS/LAPACK routines called from
      C/C++, and requires adjustment of most such calls -- see
      \sQuote{Writing R Extensions} §6.6.1.   (This has been supported
      since \R 3.6.2.)

      \item Package installation speed for packages installed with
      \code{keep.source} has been improved. This resolve the issue
      reported by \I{Ofek Shilon} in \PR{18236}.
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} can optionally report
      files/directories left behind in home, \file{/tmp} (even though
      \env{TMPDIR} is set) and other directories.  See the \dQuote{R
	Internals} manual for details.

      \item \command{R CMD check} now reports byte-compilation errors
      during installation.  These are not usually fatal but may result
      in parts of the package not being byte-compiled.

      \item \env{_R_CHECK_DEPENDS_ONLY_} can be applied selectively to
      examples, tests and/or vignettes in \command{R CMD check}: see the
      \dQuote{R Internals} manual.

      \item \env{_R_CHECK_SRC_MINUS_W_IMPLICIT_} now defaults to true:
      recent versions of Apple \command{clang} on macOS have made
      implicit function declarations in C into a compilation error.

      \item \command{R CMD check --as-cran} makes use of the
      environment variable \env{AUTORECONF}.  See the
      \dQuote{R Internals} manual §8 for further details.

      \item \command{R CMD check --use-valgrind} also uses
      \command{valgrind} when re-building vignettes as some non-Sweave
      vignettes unhelpfully comment out all their code when
      \command{R CMD check} runs vignettes.

      \item Errors in re-building vignettes (unless there are LaTeX
      errors) are reported by \command{R CMD check} as \samp{ERROR} rather
      than \samp{WARNING} when running vignettes has been skipped (as it
      frequently is in \abbr{CRAN} checks and by \option{--as-cran}).

      \item \command{R CMD Rd2pdf} gains a \option{--quiet} option that is
      used by \command{R CMD build} when building the PDF package manual.

      \item \command{R CMD Rd2pdf} now always runs LaTeX in batch mode,
      consistent with \I{Texinfo} \eqn{\ge}{>=} 6.7. The \option{--batch}
      option is ignored.

      \item \command{R CMD build} and \command{R CMD check} now include
      the Rd file name and line numbers in the error message of an
      \verb{\Sexpr} evaluation failure.

      \item For packages using the \verb{\doi} Rd macro (now an
      install-time \verb{\Sexpr}) but no other dynamic Rd content,
      \command{R CMD build} now produces a smaller tarball and is
      considerably faster -- skipping temporary package installation.

      \item \command{R CMD check} can optionally (but included in
      \option{--as-cran}) validate the HTML produced from the packages
      \file{.Rd} files.  See
      \url{https://blog.r-project.org/2022/04/08/enhancements-to-html-documentation/}:
      this needs a fairly recent version of HTML Tidy to be available.
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item The non-API header \file{R_ext/R-ftp-http.h} is no longer
      provided, as the entry points it covered are now all defunct.

      \item A number of non-API declarations and macro definitions have
      been moved from the installed header \file{Rinternals.h} to the
      internal header \file{Defn.h}. Packages that only use entry points
      and definitions documented to be part of the API as specified in
      \sQuote{Writing R Extensions} §6 should not be affected.

      \item The macro \code{USE_RINTERNALS} no longer has any effect
      when compiling package code.  Packages which also use
      \code{R_NO_REMAP} will need to ensure that the remapped names are
      used for calls to API functions that were formerly also made
      available as macros.

      \item The deprecated legacy S-compatibility macros \code{PROBLEM},
      \code{MESSAGE}, \code{ERROR}, \code{WARN}, \code{WARNING},
      \code{RECOVER}, \dots{} are no longer defined in
      \file{R_ext/RS.h} (included by \file{R.h}).  Replace these by
      calls to \code{Rf_error} and \code{Rf_warning} (defined in header
      \file{R_ext/Error.h} included by \file{R.h}).

      Header \file{R_ext/RS.h} no longer includes \file{R_ext/Error.h}.

      \item Header \file{R_ext/Constants.h} (included by \file{R.h})
      when included from C++ now includes the C++ header \file{cfloat}
      rather than the C header \file{float.h} (now possible as C++11 is
      required).

      \item The legacy S-compatibility macros \code{DOUBLE_*} in
      \file{R_ext/Constants.h} (included by \file{R.h}) are deprecated.

      \item The deprecated S-compatibility macros \code{SINGLE_*} in
      \file{R_ext/Constants.h} (included by \file{R.h}) have been
      removed.

      \item \code{R_Calloc}, \code{R_Free} and \code{R_Realloc} are
      preferred to their unprefixed forms and error messages now use the
      prefix. These forms were introduced in \R 3.4.0 and are available
      even when \code{STRICT_R_HEADERS} is defined.

      \item \code{rmultinom} has been documented in \sQuote{Writing R
	Extensions} §6 so is now part of the \R API.

      \item Similarly, \code{Rtanpi}, called from \R level \code{tanpi()}
      is now part of the \R API.

      \item The long-deprecated, undocumented and non-API entry point
      \code{call_R} is no longer declared in \file{R_ext/RS.h} (included
      by \file{R.h}).

      \item The header \file{S.h} which has been unsupported since Jan
      2016 has been removed.   Use \file{R.h} instead.
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item The (non-default and deprecated) \code{method = "internal"}
      for \code{download.file()} and \code{url()} no longer supports
      \samp{http://} nor \samp{ftp://} \abbr{URI}s.  (It is used only for
      \samp{file://} \abbr{URI}s.)

      On Windows, \code{download.file(method = "wininet")} no longer
      supports \samp{ftp://} \abbr{URI}s.  (It is no longer the default method,
      which is \code{"libcurl"} and does.)

      On Windows, the deprecated \code{method = "wininet"} now gives a
      warning for \samp{http://} and \samp{https://} \abbr{URI}s for both
      \code{download.file()} and \code{url()}. (It is no longer the default
      method.)

      \item On Windows, the command-line option \option{--max-mem-size}
      and environment variable \env{R_MAX_MEM_SIZE} are defunct.  The
      memory allocation limit was important for 32-bit builds,
      but these are no longer supported.

      \item \code{default.stringsAsFactors()} is now formally deprecated,
      where that was only mentioned on its regular help page,
      previously.  So it now gives a warning if called.

      \item \code{unix.time()} is defunct now; it had been deprecated since
      \R 3.4.0.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item Setting \code{digits = 0} in \code{format()},
      \code{print.default()} (and hence typically \code{print()}) or
      \code{options()} is again invalid.  Its behaviour was
      platform-dependent, and it is unclear what \dQuote{zero
	significant digits} should mean (\PR{18098}).

      \item Messages from C code in the \file{cairo} section of package
      \pkg{grDevices} are now also offered for translation, thanks to
      Michael Chirico's \PR{18123}.

      \item \code{mean(x)} with finite \code{x} now is finite also without
      "long.double" capability.

      \item \command{R CMD Rd2pdf} no longer leaves an empty build
      directory behind when it aborts due to an already existing output
      file.  (Thanks to Sebastian Meyer's \PR{18141}.)

      \item \code{density(x, weights = w, na.rm = TRUE)} when \code{anyNA(x)}
      is true, now removes weights \dQuote{in parallel} to \code{x}, fixing
      \PR{18151}, reported by \I{Matthias Gondan}.
      Additionally, it gets a \code{subdensity} option.

      \item Conversion of \verb{\Sexpr[]{<expR>}} to LaTeX or HTML no longer
      produces long blocks of empty lines when \code{<expR>} itself
      contains several lines all producing empty output.  Thanks to a
      report and patch by \I{Ivan Krylov} posted to R-devel.

      \item \command{R CMD build} no longer fails if a package vignette
      uses child documents and \file{inst/doc} exists.  (Thanks to
      Sebastian Meyer's \PR{18156}.)

      \item When an R documentation (\sQuote{help} source) file
      \file{man/foo.Rd} in a package has \verb{\donttest{..}} examples
      with a syntax error, it is now signalled as ERROR and with correct
      line numbers relating to the \file{*-Ex.R} file, thanks to Duncan
      Murdoch and Sebastian Meyer's reports and patch proposals in
      \PR{17501}.

      \item Improved determination of the correct translation domain in
      non-base packages, addressing the combination of \PR{18092} and
      \PR{17998} (\samp{#c6}) with reports and \emph{augmented} patch
      #2904 by \I{Suharto Anggono}.

      Note that \code{"R-base"} is no longer the default domain e.g.,
      for top-level calls to \code{gettext()}; rather translation needs
      explicit \code{domain = *} specification in such cases.

      \item \code{identical(attrib.as.set=FALSE)} now works correctly with
      data frames with default row names.  (Thanks to \I{Charlie Gao}'s
      \PR{18179}.)

      \item \code{txtProgressBar()} now enforces a non-zero width for
      argument \code{char}, without which no progress can be visible.

      \item \code{dimnames(table(d))} is more consistent in the case where
      \code{d} is a list with a single component, thanks to \I{Thomas Soeiro}'s
      report to R-devel.

      Further, \code{table(d1, d2)} now gives an error when \code{d1} and
      \code{d2} are data frames as suggested by Thomas in \PR{18224}.

      \item Fix for drawing semi-transparent lines and fills on the
      native Windows graphics device (\PR{18219} and \PR{16694}).
      Thanks to Nick Ray for helpful diagnosis on Bugzilla.

      \item The \I{deparse}r now wraps sub-expressions such as \code{if(A) .. }
      with parentheses when needed; thanks to Duncan Murdoch's \PR{18232}
      and \I{Lionel Henry}'s patches there.

      \item \code{remove.packages()} no longer tries to uninstall
      \code{Priority: base} packages, thanks to a report and suggestions
      by Colin Fay in \PR{18227}.

      \item \code{win.metafile()} now has \code{xpinch} and
      \code{ypinch} arguments so that the user can override Windows'
      (potentially wrong) guess at device dimensions.

      \item \code{x[i]} and \code{x[[i]]} for non-integer \code{i}
      should now behave in all cases as always documented: the index used is
      equivalent to \code{as.integer(i)} unless that would overflow where
      \code{trunc(i)} is used instead; thanks to \I{Suharto Anggono}'s report
      and patch proposals in \PR{17977}.

      \item \code{asOneSidedFormula()} now associates the resulting
      formula with the global environment rather than the evaluation
      environment created for the call.

      \item \code{<bibentry>$name} now matches the field name
      case-insensitively, consistent with \code{bibentry()} creation and
      the replacement method.

      \item \code{cbind()} failed to detect some length mismatches with
      a mixture of time-series and non-time-series inputs.

      \item The default LaTeX style file \file{Sweave.sty} used by the
      \code{RweaveLatex} driver no longer loads the obsolete \samp{ae}
      package; thanks to a report by \I{Thomas Soeiro} in \PR{18271}.
      Furthermore, it now skips \samp{\\usepackage[T1]{fontenc}} for
      engines other than \I{pdfTeX} (if detected) or if the new
      \samp{[nofontenc]} option is used.

      \item \code{smooth.spline()} now stores its logical \code{cv}
      argument more safely, fixing a rare bug when printing, and also
      stores \code{n}.

      \item \code{smooth.spline(x,y,*)} now computes the \code{cv.crit}
      statistic correctly, also when \code{is.unsorted(x)}, fixing
      \PR{18294}.

      \item The \code{data.frame} method of \code{rbind()} now warns
      when binding not-wholly-recycling vectors, by analogy to the default
      method (for matrices).

      \item \code{setAs()} finds the correct class for name \code{to}
      when multiple packages define a class with that name. Thanks to
      \I{Gabor Csardi} for the report.

      \item Fix for detaching a package when two classes of the same name
      are present in method signatures for the same generic. Thanks to
      \I{Gabor Csardi} for the report.

      \item \code{match.arg("", c("", "a", "B"))} gives a better error
      message, in part from \PR{17959}, thanks to \I{Elin Waring}.

      \item \command{R CMD Sweave --clean} no longer removes
      pre-existing files or subdirectories (\PR{18242}).

      \item The \code{quartz()} device no longer splits polylines into
      subpaths. That has caused narrowly-spaced lines with many points
      to always look solid even when dashed line type was used due to
      dash phase restarts.

      \item Deparsing constructs such as \code{quote(1 + `!`(2) + 3)} works
      again as before R 3.5.0, thanks to the report and patch in \PR{18284}
      by \I{Suharto Anggono}.

      \item \code{as.list(f)} for a \code{factor} \code{f} now keeps
      \code{names(f)}, fixing \PR{18309}.

      \item \code{qbeta(.001, .9, .009)} and analogous \code{qf()} calls now
      return a correct value instead of \code{NaN} or wrongly \code{1}, all
      with a warning; thanks to the report by \I{Ludger Goeminne} in \PR{18302}.

      \item \code{plot.lm()} failed to produce the plot of residuals vs.
      factor levels (i.e., \code{which=5} when leverages are constant)
      for models with character predictors (\PR{17840}).

      \item \code{interaction.plot(..., xtick = TRUE)} misplaced the
      x-axis line (\PR{18305}).

      \item Not strictly fixing a bug, \I{\code{format()}ing} and
      \I{\code{print()}ing} of non-finite \code{Date} and \code{POSIXt}
      values \code{NaN} and \eqn{\pm}{+/-}\code{Inf} no longer show as
      \code{NA} but the respective string, e.g., \code{Inf}, for
      consistency with numeric vector's behaviour, fulfilling the wish
      of \PR{18308}.

      \item \command{R CMD check} no longer runs test scripts generated
      from corresponding \file{.Rin} files twice and now signals an
      ERROR if processing an \file{.Rin} script fails.

      \item \code{tools::Rd2txt()} used for plain-text help pages now renders
      \verb{\href}s (if \code{tools::Rd2txt_options(showURLs = TRUE)})
      and \verb{\url}s with percent-encoding and standards-compliant
      delimiting style (angle brackets and no \samp{URL: } prefix).
      \verb{\email} is now rendered with a \samp{mailto:} prefix.
    }
  }
}

\section{\Rlogo Changes in R 4.1.3}{
  \subsection{New Features}{
    \itemize{
      \item The default version of Bioconductor has been changed to
      3.14. (This is used by \code{setRepositories} and the menus in
      GUIs.)
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check --as-cran} has a workaround for a bug
      in versions of \command{file} up to at least 5.41 which
      mis-identify \abbr{DBF} files last changed in 2022 as executables.
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item The legacy S-compatibility macros \code{SINGLE_*} in
      \file{R_ext/Constants.h} (included by \file{R.h}) are deprecated
      and will be removed in \R 4.2.0.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item Initialization of self-starting \code{nls()} models with
      initialization functions following the pre-R-4.1.0 API
      (without the \code{...} argument) works again for now, with a
      deprecation warning.

      \item Fixed quoting of \code{~autodetect~} in Java setting defaults
      to avoid inadvertent user lookup due to leading \code{~}, reported
      in \PR{18231} by \I{Harold Gutch}.

      \item \code{substr(., start, stop) <- v} now treats \emph{negative}
      \code{stop} values correctly.  Reported with a patch in \PR{18228} by
      \I{Brodie Gaslam}.

      \item Subscripting an array \code{x} without dimnames by a
      \code{length(dim(x))}-column character matrix gave "random"
      non-sense, now an error; reported in \PR{18244} by \I{Mikael Jagan}.

      \item \code{...names()} now matches \code{names(list(...))} closely,
      fixing \PR{18247}.

      \item \code{all.equal(*, scale = s)} now works as intended when
      \code{length(s) > 1}, partly thanks to Michael Chirico's \PR{18272}.

      \item \code{print(x)} for long vectors \code{x} now also works for
      named atomic vectors or lists and prints the correct number when
      reaching the \code{getOption("max.print")} limit; partly thanks to a
      report and proposal by Hugh Parsonage to the R-devel list.

      \item \code{all.equal(<selfStart>, *)} no longer signals a deprecation
      warning.

      \item \code{reformulate(*, response=r)} gives a helpful error message
      now when \code{length(r) > 1}, thanks to Bill Dunlap's \PR{18281}.

      \item Modifying \code{globalCallingHandlers} inside
      \code{withCallingHandlers()} now works or fails correctly, thanks to
      \I{Henrik Bengtsson}'s \PR{18257}.

      \item \code{hist(<Date>, breaks = "days")} and
      \code{hist(<POSIXt>, breaks = "secs")}
      no longer fail for inputs of length 1.

      \item \code{qbeta(.001, .9, .009)} and similar cases now converge
      correctly thanks to \I{Ben Bolker}'s report in \PR{17746}.

      \item \code{window(x, start, end)} no longer wrongly signals
      \dQuote{'start' cannot be after 'end'}, fixing \PR{17527} and
      \PR{18291}.

      \item \code{data()} now checks that its (rarely used) \code{list}
      argument is a character vector -- a couple of packages passed other
      types and gave incorrect results.

      \item \code{which()} now checks its \code{arr.ind} argument is
      TRUE rather coercing to logical and taking the first element --
      which gave incorrect results in package code.

      \item \code{model.weights()} and \code{model.offset()} more carefully
      extract their model components, thanks to \I{Ben Bolker} and Tim Taylor's
      R-devel post.

      \item \code{list.files(recursive = TRUE)} now shows all broken
      symlinks (previously, some of them may have been omitted, \PR{18296}).
    }
  }
}

\section{\Rlogo Changes in R 4.1.2}{
  \subsection{C-Level Facilities}{
    \itemize{
      \item The workaround in headers \file{R.h} and \file{Rmath.h}
      (\code{using namespace std;}) for the Oracle Developer Studio
      compiler is no longer needed now C++11 is required so has been
      removed.  A couple more usages of \code{log()} (which should have
      been \code{std::log()}) with an \code{int} argument are reported on
      Solaris.

      \item The undocumented limit of 4095 bytes on messages from the
      S-compatibility macros \code{PROBLEM} and \code{MESSAGE} is now
      documented and longer messages will be silently truncated rather
      than potentially causing segfaults.

      \item If the \code{R_NO_SEGV_HANDLER} environment variable is
      non-empty, the signal handler for \I{SEGV}/ILL/BUS signals (which
      offers recovery user interface) is not set. This allows more
      reliable debugging of crashes that involve the console.
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item The legacy S-compatibility macros \code{PROBLEM},
      \code{MESSAGE}, \code{ERROR}, \code{WARN}, \code{WARNING},
      \code{RECOVER}, \dots{} are deprecated and will be hidden in \R
      4.2.0. \R{}'s native interface of \code{Rf_error} and
      \code{Rf_warning} has long been preferred.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{.mapply(F, dots, .)} no longer segfaults when
      \code{dots} is not a \code{list} and uses \code{match.fun(F)} as
      always documented; reported by Andrew Simmons in \PR{18164}.

      \item \code{hist(<Date>, ...)} and \code{hist(<POSIXt>, ...)}
      no longer pass arguments for \code{rect()} (such as \code{col} and
      \code{density}) to \code{axis()}.  (Thanks to Sebastian Meyer's
      \PR{18171}.)

      \item \verb{\Sexpr{ch}} now preserves \code{Encoding(ch)}. (Thanks to
      report and patch by \I{Jeroen Ooms} in \PR{18152}.)

      \item Setting the RNG to \code{"Marsaglia-Multicarry"} e.g., by
      \code{RNGkind()}, now warns in more places, thanks to
      \I{André Gillibert}'s report and patch in \PR{18168}.

      \item \code{gray(numeric(), alpha=1/2)} no longer segfaults, fixing
      \PR{18183}, reported by \I{Till Krenz}.

      \item Fixed \code{dnbinom(x, size=<very_small>, .., log=TRUE)}
      regression, reported by Martin Morgan.

      \item \code{as.Date.POSIXlt(x)} now keeps \code{names(x)}, thanks to
      Davis Vaughan's report and patch in \PR{18188}.

      \item \code{model.response()} now strips an \code{"AsIs"} class typically,
      thanks to Duncan Murdoch's report and other discussants in \PR{18190}.

      \item \code{try()} is considerably faster in case of an error and
      long call, as e.g., from some \code{do.call()}.  Thanks to
      \I{Alexander Kaever}'s suggestion posted to R-devel.

      \item \code{qqline(y = <object>)} such as \code{y=I(.)}, now works,
      see also \PR{18190}.

      \item Non-integer \code{mgp} \code{par()} settings are now handled
      correctly in \code{axis()} and \code{mtext()}, thanks to \I{Mikael
      Jagan} and Duncan Murdoch's report and suggestion in \PR{18194}.

      \item \code{formatC(x)} returns length zero \code{character()} now,
      rather than \code{""} when \code{x} is of length zero, as documented,
      thanks to Davis Vaughan's post to R-devel.

      \item \code{removeSource(fn)} now retains (other) \code{attributes(fn)}.
    }
  }
}

\section{\Rlogo Changes in R 4.1.1}{
  \subsection{New Features}{
    \itemize{
      \item \code{require(\var{pkg}, quietly = TRUE)} is quieter and in
      particular does not warn if the package is not found.
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item Use of \samp{ftp://} \abbr{URI}s should be regarded as
      deprecated, with on-going support confined to \code{method =
	"libcurl"} and not routinely tested.  (Nowadays no major browser
      supports them.)

      \item The non-default \code{method = "internal"} is deprecated for
      \samp{http://} and \samp{ftp://} \abbr{URI}s for both
      \code{download.file} and \code{url}.

      \item On Windows, \code{method = "wininet"} is deprecated for
      \samp{http://}, \samp{https://} and \samp{ftp://} \abbr{URI}s for both
      \code{download.file} and \code{url}.  (A warning is only given for
      \samp{ftp://}.)

      For \samp{ftp://} \abbr{URI}s the default method is now \code{"libcurl"}
      if available (which it is on \abbr{CRAN} builds).

      \code{method = "wininet"} remains the default for \samp{http://}
      and \samp{https://} \abbr{URI}s but if \code{libcurl} is available, using
      \code{method = "libcurl"} is preferred.
    }
  }

  \subsection{Installation}{
    \itemize{
      \item \command{make check} now works also without a LaTeX
      installation.  (Thanks to Sebastian Meyer's \PR{18103}.)
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \command{make check-devel} works again in an \R build
      configured with \option{--without-recommended-packages}.

      \item \code{qnbinom(p, size, mu)} for large \code{size/mu} is correct
      now in a range of cases (\PR{18095}); similarly for the \code{(size,
      prob)} parametrization of the negative binomial.  Also \code{qpois()}
      and \code{qbinom()} are better and or faster for extreme cases.  The
      underlying C code has been modularized and is common to all four cases
      of discrete distributions.

      \item \code{gap.axis} is now part of the \code{axis()} arguments which
      are passed from \code{bxp()}, and hence \code{boxplot()}.  (Thanks to
      Martin Smith's report and suggestions in \PR{18109}.)

      \item \code{.First} and \code{.Last} can again be set from the site
      profile.

      \item \code{seq.int(from, to, *)} and \code{seq.default(..)} now work
      better in large range cases where \code{from-to} is infinite where
      the two boundaries are finite.

      \item \code{all.equal(x,y)} now returns \code{TRUE} correctly also
      when several entries of \code{abs(x)} and \code{abs(y)} are close to
      \code{.Machine$double.xmax}, the largest finite \code{numeric}.

      \item \code{model.frame()} now clears the object bit when removing the
      \code{class} attribute of a value via \code{na.action} (\PR{18100}).

      \item \code{charClass()} now works with multi-character
      strings on Windows (\PR{18104}, fixed by Bill Dunlap).

      \item \code{encodeString()} on Solaris now works again in Latin-1
      encoding on characters represented differently in UTF-8.  Support for
      surrogate pairs on Solaris has been improved.

      \item \code{file.show()} on Windows now works with non-ASCII path
      names representable in the current native encoding (\PR{18132}).

      \item Embedded \R on Windows can now find \R home directory via the
      registry even when installed only for the current user (\PR{18135}).

      \item \code{pretty(x)} with finite \code{x} now returns finite values
      also in the case where the extreme \code{x} values are close in size
      to the maximal representable number \code{.Machine$double.xmax}.

      Also, it's been tweaked for very small ranges and when a boundary is
      close (or equal) to zero; e.g., \code{pretty(c(0,1e-317))} no longer
      has negative numbers, currently still warning about a very small
      range, and \code{pretty(2^-(1024 - 2^-1/(c(24,10))))} is more accurate.

      \item The error message for not finding vignette files when weaving
      has correct file sizes now. (Thanks to Sebastian Meyer's \PR{18154}.)

      \item \code{dnbinom(20, <large>, 1)} now correctly gives 0, and
      similar cases are more accurate with underflow precaution.
      (Reported by \I{Francisco Vera Alcivar} in \PR{18072}.)
    }
  }
}


\section{\Rlogo Changes in R 4.1.0}{
  \subsection{Future Directions}{
    \itemize{
      \item It is planned that the 4.1.x series will be the last to
      support 32-bit Windows, with production of binary packages for
      that series continuing until early 2023.
    }
  }

  \subsection{Significant User-Visible Changes}{
    \itemize{
      \item Data set \code{esoph} in package \pkg{datasets} now provides
      the correct numbers of controls; previously it had the numbers of
      cases added to these.  (Reported by Alexander Fowler in \PR{17964}.)
    }
  }

  \subsection{New Features}{
    \itemize{
      \item \samp{www.omegahat.net} is no longer one of the repositories
      known by default to \code{setRepositories()}.  (Nowadays it only
      provides source packages and is often unavailable.)
      %% it had one Windows binary package for 4.0, none for 3.6.

      \item Function \code{package_dependencies()} (in package
      \pkg{tools}) can now use different dependency types for direct and
      recursive dependencies.

      \item The checking of the size of tarball in
      \command{R CMD check --as-cran <pkg>} may be tweaked via the new
      environment variable
      \env{_R_CHECK_CRAN_INCOMING_TARBALL_THRESHOLD_}, as suggested in
      \PR{17777} by \I{Jan Gorecki}.

      \item Using \code{c()} to combine a factor with other factors now
      gives a factor, an ordered factor when combining ordered factors
      with identical levels.

      \item \code{apply()} gains a \code{simplify} argument to allow
      disabling of simplification of results.

      \item The \code{format()} method for class \code{"ftable"} gets a
      new option \code{justify}.  (Suggested by \I{Thomas Soeiro}.)

      \item New \code{...names()} utility.  (Proposed by \I{Neal Fultz} in
      \PR{17705}.)

      \item \code{type.convert()} now warns when its \code{as.is} argument
      is not specified, as the help file always said it \emph{should}.  In
      that case, the default is changed to \code{TRUE} in line with its
      change in \code{read.table()} (related to \code{stringsAsFactors}) in
      \R 4.0.0.

      \item When printing list arrays, classed objects are now shown
      \emph{via} their \code{format()} value if this is a short enough
      character string, or by giving the first elements of their class
      vector and their length.

      \item \code{capabilities()} gets new entry \code{"Rprof"} which is
      \code{TRUE} when \R has been configured with the equivalent of
      \command{--enable-R-profiling} (as it is by default).  (Related to
      \I{Michael Orlitzky}'s report \PR{17836}.)

      \item \code{str(xS4)} now also shows extraneous attributes of an
      S4 object \code{xS4}.

      \item Rudimentary support for vi-style tags in \code{rtags()} and
      \command{R CMD rtags} has been added.  (Based on a patch from
      \I{Neal Fultz} in \PR{17214}.)

      \item \code{checkRdContents()} is now exported from \pkg{tools}; it
      and also \code{checkDocFiles()} have a new option \code{chkInternal}
      allowing to check Rd files marked with keyword \code{"internal"} as
      well.  The latter can be activated for \command{R CMD check} via
      environment variable \env{_R_CHECK_RD_INTERNAL_TOO_}.

      \item New functions \code{numToBits()} and \code{numToInts()}
      extend the \code{raw} conversion utilities to (double precision)
      \code{numeric}.

      \item Functions \code{URLencode()} and \code{URLdecode()} in
      package \pkg{utils} now work on vectors of \abbr{URI}s.
      (Based on patch from \I{Bob Rudis} submitted with \PR{17873}.)

      \item \code{path.expand()} can expand \samp{~user} on most
      Unix-alikes even when \code{readline} is not in use.  It tries
      harder to expand \samp{~}, for example should environment variable
      \env{HOME} be unset.

      \item For HTML help (both dynamic and static), Rd file links to
      help pages in external packages are now treated as references to
      topics rather than file names, and fall back to a file link only
      if the topic is not found in the target package. The earlier rule
      which prioritized file names over topics can be restored by
      setting the environment variable \env{_R_HELP_LINKS_TO_TOPICS_} to
      a false value.

      \item \code{c()} now removes \code{NULL} arguments before
      dispatching to methods, thus simplifying the implementation of
      \code{c()} methods, \emph{but} for back compatibility keeps
      \code{NULL} when it is the first argument.  (From a report and
      patch proposal by Lionel Henry in \PR{17900}.)

      \item \code{Vectorize()}'s result function's environment no longer
      keeps unneeded objects.

      \item Function \code{...elt()} now propagates visibility
      consistently with \code{..n}.  (Thanks to Lionel Henry's
      \PR{17905}.)

      \item \code{capture.output()} no longer uses non-standard
      evaluation to evaluate its arguments.  This makes evaluation of
      functions like \code{parent.frame()} more consistent.  (Thanks to
      Lionel Henry's \PR{17907}.)

      \item \code{packBits(bits, type="double")} now works as inverse of
      \code{numToBits()}.  (Thanks to Bill Dunlap's proposal in
      \PR{17914}.)

      \item \code{curlGetHeaders()} has two new arguments,
      \code{timeout} to specify the timeout for that call (overriding
      \code{getOption("timeout")}) and \code{TLS} to specify the minimum
      \abbr{TLS} protocol version to be used for \code{https://} \abbr{URI}s
      (\emph{inter alia} providing a means to check for sites using
      deprecated \abbr{TLS} versions 1.0 and 1.1).

      \item For \code{nls()}, an optional constant \code{scaleOffset}
      may be added to the denominator of the relative offset convergence
      test for cases where the fit of a model is expected to be exact,
      thanks to a proposal by John Nash.  \code{nls(*, trace=TRUE)} now
      also shows the convergence criterion.

      \item Numeric differentiation \emph{via} \code{numericDeriv()}
      gets new optional arguments \code{eps} and \code{central}, the
      latter for taking central divided differences.  The latter can be
      activated for \code{nls()} via \code{nls.control(nDcentral =
      TRUE)}.

      \item \code{nls()} now passes the \code{trace} and \code{control}
      arguments to \code{getInitial()}, notably for all self-starting models,
      so these can also be fit in zero-noise situations via a
      \code{scaleOffset}.  For this reason, the \code{initial} function of a
      \code{selfStart} model must now have \code{...} in its argument list.

      \item \code{bquote(splice = TRUE)} can now splice expression
      vectors with attributes: this makes it possible to splice the
      result of \code{parse(keep.source = TRUE)}.  (Report and patch
      provided by Lionel Henry in \PR{17869}.)

      \item \code{textConnection()} gets an optional \code{name} argument.

      \item \code{get()}, \code{exists()}, and \code{get0()} now signal
      an error if the first argument has length greater than 1.
      Previously additional elements were silently ignored.  (Suggested
      by \I{Antoine Fabri} on R-devel.)

      \item \R{} now provides a shorthand notation for creating functions,
      e.g. \code{\(x) x + 1} is parsed as \code{function(x) x + 1}.

      \item \R{} now provides a simple native forward pipe syntax
      \code{|>}.  The simple form of the forward pipe inserts the
      left-hand side as the first argument in the right-hand side call.
      The pipe implementation as a syntax transformation was motivated
      by suggestions from Jim Hester and Lionel Henry.

      \item \code{all.equal(f, g)} for \code{function}s now by default also
      compares their \code{environment(.)}s, notably via new
      \code{all.equal} method for class \code{function}.  Comparison of
      \code{nls()} fits, e.g., may now need \code{all.equal(m1, m2,
	check.environment = FALSE)}.

      \item \code{.libPaths()} gets a new option \code{include.site},
      allowing to \emph{not} include the site library.  (Thanks to
      \I{Dario Strbenac}'s suggestion and \I{Gabe Becker}'s \PR{18016}.)

      \item Lithuanian translations are now available.  (Thanks to
      \I{Rimantas Žakauskas}.)

      \item \code{names()} now works for \code{DOTSXP} objects.  On the
      other hand, in \file{R-lang}, the R language manual, we now warn
      against relying on the structure or even existence of such
      dot-dot-dot objects.

      \item \code{all.equal()} no longer gives an error on \code{DOTSXP}
      objects.

      %% The Homebrew arm64 libs have cairo but not cairo-xlib
      \item \code{capabilities("cairo")} now applies only to the
      file-based devices as it is now possible (if very unusual) to
      build \R with Cairo support for those but not for \code{X11()}.

      \item There is optional support for tracing the progress of
      \code{loadNamespace()} --- see its help.

      \item (Not Windows.)
      \code{l10n_info()} reports an additional element, the name of the
      encoding as reported by the OS (which may differ from the
      encoding part (if any) of the result from
      \code{Sys.getlocale("LC_CTYPE")}).

      \item New function \code{gregexec()} which generalizes \code{regexec()}
      to find \emph{all} disjoint matches and all substrings
      corresponding to parenthesized subexpressions of the given regular
      expression.  (Contributed by \I{Brodie Gaslam}.)

      \item New function \code{charClass()} in package \pkg{utils} to
      query the wide-character classification functions in use (such as
      \code{iswprint}).

      \item The names of \code{quantile()}'s result no longer depend on the
      global \code{getOption("digits")}, but \code{quantile()} gets a new
      optional argument \code{digits = 7} instead.

      \item \code{grep()}, \code{sub()}, \code{regexp} and variants work
      considerably faster for long factors with few levels.  (Thanks to
      Michael Chirico's \PR{18063}.)

      \item Provide grouping of \code{x11()} graphics windows within
      a window manager such as \code{Gnome} or \code{Unity}; thanks to a
      patch by \I{Ivan Krylov} posted to R-devel.

      \item The \code{split()} method for class \code{data.frame} now
      allows the \code{f} argument to be specified as a formula.

      \item \code{sprintf} now warns on arguments unused by the format
      string.

      \item New palettes \code{"Rocket"} and \code{"Mako"} for
      \code{hcl.colors()} (approximating palettes of the same name
      from the \pkg{viridisLite} package).

      Contributed by \I{Achim Zeileis}.

      \item The base environment and its namespace are now locked (so
      one can no longer add bindings to these or remove from these).

      \item \command{Rterm} handling of multi-byte characters has been
      improved, allowing use of such characters when supported by the
      current locale.

      \item \command{Rterm} now accepts \code{ALT+ +xxxxxxxx} sequences to
      enter Unicode characters as hex digits.

      \item Environment variable \env{LC_ALL} on Windows now takes
      precedence over \env{LC_CTYPE} and variables for other supported
      categories, matching the POSIX behaviour.

      \item \code{duplicated()} and \code{anyDuplicated()} are now
      optimized for integer and real vectors that are known to be sorted
      via the \I{ALTREP} framework. Contributed by Gabriel Becker via \PR{17993}.
    }
  }

  \subsection{Graphics}{
    \itemize{
      \item The graphics engine version, \code{R_GE_version}, has been
      bumped to \code{14} and so packages that provide graphics devices
      should be reinstalled.

      \item Graphics devices should now specify \code{deviceVersion} to
      indicate what version of the graphics engine they support.

      \item Graphics devices can now specify \code{deviceClip}.  If
      \code{TRUE}, the graphics engine will never perform any clipping
      of output itself.

      The clipping that the graphics engine does perform (for both
      \code{canClip = TRUE} and \code{canClip = FALSE}) has been
      improved to avoid producing unnecessary artifacts in clipped
      output.

      \item The \pkg{grid} package now allows \code{gpar(fill)} to be
      a \code{linearGradient()}, a \code{radialGradient()}, or a
      \code{pattern()}.  The \code{viewport(clip)} can now also be
      a grob, which defines a clipping path, and there is a new
      \code{viewport(mask)} that can also be a grob, which defines
      a mask.

      These new features are only supported so far on the Cairo-based
      graphics devices and on the \code{pdf()} device.

      \item (Not Windows.)
      A warning is given when a Cairo-based type is specified for a
      \code{png()}, \code{jpeg()}, \code{tiff()} or \code{bmp()}
      device but Cairo is unsupported (so \code{type = "Xlib"}
      is tried instead).

      \item \code{grSoftVersion()} now reports the versions of \I{FreeType}
      and \I{FontConfig} if they are used directly (not \emph{via} \I{Pango}),
      as is most commonly done on macOS.
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item The \emph{standalone} \file{libRmath} math library and \R's C
      API now provide \code{log1pexp()} again as documented, and gain
      \code{log1mexp()}.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item \command{configure} checks for a program \command{pkgconf}
      if program \command{pkg-config} is not found.  These are now only
      looked for on the path (like almost all other programs) so if needed
      specify a full path to the command in \code{PKG_CONFIG}, for example
      in file \file{config.site}.

      \item C99 function \code{iswblank} is required -- it was last seen
      missing ca 2003 so the workaround has been removed.

      \item There are new \command{configure} options
      \option{--with-internal-iswxxxxx},
      \option{--with-internal-towlower} and
      \option{--with-internal-wcwidth} which allows the system functions
      for wide-character classification, case-switching and width
      (\code{wcwidth} and \code{wcswidth}) to be replaced by internal
      ones.  The first has long been used on macOS, \I{AIX} (and Windows)
      but this enables it to be unselected there and selected for other
      platforms (it is the new default on Solaris).  The second is new
      in this version of \R and is selected by default on macOS and
      Solaris.  The third has long been the default and remains so as it
      contains customizations for East Asian languages.

      System versions of these functions are often minimally implemented
      (sometimes only for ASCII characters) and may not cover the full
      range of Unicode points: for example Solaris (and Windows) only
      cover the Basic Multilingual Plane.

      \item Cairo installations without X11 are more likely to be
      detected by \command{configure}, when the file-based Cairo
      graphics devices will be available but not \code{X11(type =
      "cairo")}.

      \item There is a new \command{configure} option
      \option{--with-static-cairo} which is the default on macOS.  This
      should be used when only static \I{cairo} (and where relevant, \I{Pango})
      libraries are available.

      \item \I{Cairo}-based graphics devices on platforms without \I{Pango} but
      with \I{FreeType}/\I{FontConfig} will make use of the latter for font selection.
    }
  }


  \subsection{Link-Time Optimization on a Unix-Alike}{
    \itemize{
      \item Configuring with flag \option{--enable-lto=R} now also uses
      \abbr{LTO} when installing the recommended packages.

      \item \command{R CMD INSTALL} and \command{R CMD SHLIB} have a new
      flag \option{--use-LTO} to use \abbr{LTO} when compiling code, for use
      with \R configured with \option{--enable-lto=R}.  For \R
      configured with \option{--enable-lto}, they have the new flag
      \option{--no-use-LTO}.

      Packages can opt in or out of \abbr{LTO} compilation \emph{via} a
      \samp{UseLTO} field in the \file{DESCRIPTION} file.  (As usual this
      can be overridden by the command-line flags.)
    }
  }

  \subsection{Building R on Windows}{
    \itemize{
      \item for GCC \eqn{\ge}{>=} 8, \code{FC_LEN_T} is defined in
      \file{config.h} and hence character lengths are passed from C to
      Fortran in \emph{inter alia} BLAS and LAPACK calls.

      \item There is a new text file
      \file{src/gnuwin32/README.compilation}, which outlines how C/Fortran
      code compilation is organized and documents new features:
      \itemize{
	\item \R can be built with Link-Time Optimization with a
	suitable compiler -- doing so with GCC 9.2 showed several
	inconsistencies which have been corrected.

	\item There is support for cross-compiling the C and Fortran
	code in \R and standard packages on suitable (Linux) platforms.
	This is mainly intended to allow developers to test later
	versions of compilers -- for example using GCC 9.2 or 10.x has
	detected issues that GCC 8.3 in \I{Rtools40} does not.

	\item There is experimental support for cross-building \R
	packages with C, C++ and/or Fortran code.
      }

      \item The R installer can now be optionally built to support a single
      architecture (only 64-bit or only 32-bit).
    }
  }

  \subsection{Package Installation}{
    \itemize{
      \item The default C++ standard has been changed to C++14 where
      available (which it is on all currently checked platforms): if not
      (as before) C++11 is used if available otherwise C++ is not
      supported.

      Packages which specify C++11 will still be installed using C++11.

      C++14 compilers may give deprecation warnings, most often for
      \code{std::random_shuffle} (deprecated in C++14 and removed in
      C++17).  Either specify C++11 (see \sQuote{Writing R Extensions})
      or modernize the code and if needed specify C++14.  The latter has
      been supported since \R 3.4.0 so the package's \file{DESCRIPTION}
      would need to include something like
\preformatted{
     Depends: R (>= 3.4)
}
    }
  }

  \subsection{Package Installation on Windows}{
    \itemize{
      \item \command{R CMD INSTALL} and \command{R CMD SHLIB} make use
      of their flag \option{--use-LTO} when the \samp{LTO_OPT} make
      macro is set in file \file{etc/$\{R_ARCH\}/Makeconf} or in a
      personal/site \file{Makevars} file.  (For details see
      \sQuote{Writing R Extensions} §4.5.)

      This provides a valuable check on code consistency.  It does work
      with GCC 8.3 as in \I{Rtools40}, but that does not detect everything
      the \abbr{CRAN} checks with current GCC do.
    }
  }

  \subsection{Package Installation on macOS}{
    \itemize{
      \item The default personal library directory on builds with
      \option{--enable-aqua} (including \abbr{CRAN} builds) now
      differs by CPU type, one of
\preformatted{
      ~/Library/R/x86_64/x.y/library
      ~/Library/R/arm64/x.y/library
}
      This uses the CPU type \R (and hence the packages) were built for,
      so when a \samp{x86_64} build of R is run under Rosetta emulation on
      an \samp{arm64} Mac, the first is used.
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} can now scan package functions for
      bogus \code{return} statements, which were possibly intended as
      \code{return()} calls (wish of \PR{17180}, patch by Sebastian
      Meyer). This check can be activated via the new environment
      variable \env{_R_CHECK_BOGUS_RETURN_}, true for \code{--as-cran}.

      \item \command{R CMD build} omits tarballs and binaries of
      previous builds from the top-level package directory.
      (\PR{17828}, patch by Sebastian Meyer.)

      \item \command{R CMD check} now runs sanity checks on the use of
      \samp{LazyData}, for example that a \file{data} directory is
      present and that \samp{LazyDataCompression} is not specified
      without \samp{LazyData} and has a documented value.  For packages
      with large \I{LazyData} databases without specifying
      \samp{LazyDataCompression}, there is a reference to the code given
      in \sQuote{Writing R Extensions} §1.1.6 to test the choice of
      compression (as in all the \abbr{CRAN} packages tested a
      non-default method was preferred).

      \item \command{R CMD build} removes \samp{LazyData} and
      \samp{LazyDataCompression} fields from the \file{DESCRIPTION} file
      of packages without a \file{data} directory.
    }
  }

  \subsection{Encoding-Related Changes}{
    \itemize{
      \item The parser now treats \samp{\\Unnnnnnnn} escapes larger than
      the upper limit for Unicode points (\samp{\\U10FFFF}) as an error
      as they cannot be represented by valid UTF-8.

      Where such escapes are used for outputting non-printable
      (including unassigned) characters, 6 hex digits are used (rather
      than 8 with leading zeros).  For clarity, braces are used, for
      example \samp{\\U\{0effff\}}.

      \item The parser now looks for non-ASCII spaces on Solaris (as
      previously on most other OSes).

      \item There are warnings (including from the parser) on the use of
      unpaired surrogate Unicode points such as \samp{\\uD834}.  (These
      cannot be converted to valid UTF-8.)

      \item Functions \code{nchar()}, \code{tolower()}, \code{toupper()}
      and \code{chartr()} and those using regular expressions have more
      support for inputs with a marked Latin-1 encoding.

      \item The character-classification functions used (by default) to
      replace the system \code{iswxxxxx} functions on Windows, macOS and
      \I{AIX} have been updated to Unicode 13.0.0.

      The character-width tables have been updated to include new
      assignments in Unicode 13.0.0.  This included treating all control
      characters as having zero width.

      \item The code for evaluating default (extended) regular
      expressions now uses the same character-classification functions
      as the rest of \R (previously they differed on Windows, macOS and
      \I{AIX}).

      \item There is a build-time option to replace the system's
      wide-character \code{wctrans} C function by tables shipped with
      \R: use \command{configure} option
      \option{--with-internal-towlower} or (on Windows)
      \samp{-DUSE_RI18N_CASE} in \samp{CFLAGS} when building \R.  This
      may be needed to allow \code{tolower()} and \code{toupper()} to
      work with Unicode characters beyond the Basic Multilingual Plane
      where not supported by system functions (e.g. on Solaris where it
      is the new default).

      \item R is more careful when truncating UTF-8 and other multi-byte
      strings that are too long to be printed, passed to the system or
      libraries or placed into an internal buffer.  Truncation will no
      longer produce incomplete multibyte characters.
    }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item Function \code{plclust()} from the package \pkg{stats} and
      \code{package.dependencies()}, \code{pkgDepends()},
      \code{getDepList()}, \code{installFoundDepends()}, and
      \code{vignetteDepends()} from package \pkg{tools} are defunct.

      \item Defunct functions \code{checkNEWS()} and \code{readNEWS()} from
      package \pkg{tools} and \code{CRAN.packages()} from \pkg{utils} have
      been removed.

      \item \command{R CMD config CXXCPP} is defunct (it was deprecated
      in \R{} 3.6.2).

      \item \code{parallel::detectCores()} drops support for \I{IRIX}
      (retired in 2013).

      \item The \code{LINPACK} argument to \code{chol.default()},
      \code{chol2inv()}, \code{solve.default()} and \code{svd()} has
      been defunct since \R 3.1.0.  It was silently ignored up to \R
      4.0.3 but now gives an error.

      \item Subsetting/indexing, such as \code{ddd[*]} or \code{ddd$x}
      on a \code{DOTSXP} (dot-dot-dot) object \code{ddd} has been
      disabled; it worked by accident only and was undocumented.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item Many more C-level allocations (mainly by \code{malloc} and
      \code{strdup}) are checked for success with suitable alternative
      actions.

      \item Bug fix for \code{replayPlot()};  this was turning off
      graphics engine display list recording if a recorded plot was
      replayed in the same session.  The impact of the bug became
      visible if resize the device after replay OR if attempted another
      \code{savePlot()} after replay (empty display list means empty
      screen on resize or empty saved plot).

      \item \command{R CMD check} etc now warn when a package exports
      non-existing S4 classes or methods, also in case of no
      \dQuote{methods} presence.  (Reported by Alex Bertram;
      reproducible example and patch by Sebastian Meyer in \PR{16662}.)

      \item \code{boxplot()} now also accepts \code{call}s for labels such
      as \code{ylab}, the same as \code{plot()}.
      (Reported by \I{Marius Hofert}.)

      \item The help page for \code{xtabs()} now correctly states that
      \code{addNA} is setting \code{na.action = na.pass} among others.
      (Reported as \PR{17770} by \I{Thomas Soeiro}.)

      \item The \command{R CMD check <pkg>} gives a longer and more
      comprehensible message when \file{DESCRIPTION} misses dependencies,
      e.g., in \code{Imports:}.  (Thanks to the contributors of \PR{17179}.)

      \item \code{update.default()} now calls the generic \code{update()}
      on the formula to work correctly for models with extended formulas.
      (As reported and suggested by \I{Neal Fultz} in \PR{17865}.)

      \item The horizontal position of leaves in a dendrogram is now
      correct also with \code{center = FALSE}.  (\PR{14938}, patch from
      Sebastian Meyer.)

      \item \code{all.equal.POSIXt()} no longer warns about and
      subsequently ignores inconsistent \code{"tzone"} attributes, but
      describes the difference in its return value (\PR{17277}).
      This check can be disabled \emph{via} the new argument
      \code{check.tzone = FALSE} as suggested by Sebastian Meyer.

      \item \code{as.POSIXct()} now populates the \code{"tzone"}
      attribute from its \code{tz} argument when \code{x} is a logical
      vector consisting entirely of \code{NA} values.

      \item \code{x[[2^31]] <- v} now works.  (Thanks to the report and
      patch by \I{Suharto Anggono} in \PR{17330}.)

      \item In log-scale graphics, \code{axis()} ticks and label positions
      are now computed more carefully and symmetrically in their range,
      typically providing \emph{more} ticks, fulfilling wishes
      in \PR{17936}.  The change really corresponds to an improved
      \code{axisTicks()} (package \pkg{grDevices}), potentially influencing
      \pkg{grid} and \pkg{lattice}, for example.

      \item \code{qnorm(<very large negative>, log.p=TRUE)} is now correct
      to at least five digits where it was catastrophically wrong,
      previously.

      \item \code{sum(df)} and similar \code{"Summary"}- and
      \code{"Math"}-group member functions now work for data frames
      \code{df} with \code{logical} columns, notably also of zero
      rows.  (Reported to R-devel by Martin \dQuote{b706}.)

      \item \code{unsplit()} had trouble with \I{tibble}s due to unsound use of
      \code{rep(NA, len)}-indexing, which should use \code{NA_integer_}
      (Reported to R-devel by \I{Mario Annau}.)

      \item \code{pnorm(x, log.p = TRUE)} underflows to \code{-Inf} slightly
      later.

      \item \code{show(<hidden S4 generic>)} prints better and without
      quotes for non-hidden S4 generics.

      \item \code{read.table()} and relatives treated an "NA" column name as
      missing when \code{check.names = FALSE} \PR{18007}.

      \item Parsing strings containing UTF-16 surrogate pairs such as
      \code{"\uD834\uDD1E"} works better on some (uncommon) platforms.
      \code{sprintf("\%X", utf8ToInt("\uD834\uDD1E"))} should now give
      \code{"1D11E"} on all platforms.
      %% failed on Solaris

      \item \code{identical(x,y)} is no longer true for differing
      \code{DOTSXP} objects, fixing \PR{18032}.

      \item \code{str()} now works correctly for \code{DOTSXP} and related
      exotics, even when these are doomed.

      Additionally, it no longer fails for \code{list}s with a \code{class} and
      \dQuote{irregular} method definitions such that e.g. \code{lapply(*)} will
      necessarily fail, as currently for different \CRANpkg{igraph} objects.

      \item Message translation domains, e.g., for errors and warnings, are
      now correctly determined also when e.g., a \pkg{base} function is
      called from \dQuote{top-level} function (i.e., defined in \code{globalenv()}),
      thanks to a patch from \I{Joris Goosen} fixing \PR{17998}.

      \item Too long lines in environment files (e.g., \file{Renviron}) no
      longer crash \R. This limit has been increased to 100,000 bytes.
      (\PR{18001}.)

      \item There is a further workaround for \I{FreeType} giving
      incorrect italic font faces with \I{cairo}-based graphics devices on
      macOS.

      \item \code{add_datalist(*, force = TRUE)} (from package
      \pkg{tools}) now actually updates an existing \file{data/datalist}
      file for new content.  (Thanks to a report and patch by Sebastian
      Meyer in \PR{18048}.)

      \item \code{cut.Date()} and \code{cut.POSIXt()} could produce an
      empty last interval for \code{breaks = "months"} or \code{breaks =
      "years"}.  (Reported as \PR{18053} by \I{Christopher Carbone}.)

      \item Detection of the encoding of \sQuote{regular} macOS locales
      such as \samp{en_US} (which is UTF-8) had been broken by a macOS
      change: fortunately these are now rarely used with
      \samp{en_US.UTF-8} being preferred.

      \item \code{sub()} and \code{gsub(pattern, repl, x, *)} now keep
      attributes of \code{x} such as \code{names()} also when
      \code{pattern} is \code{NA} (\PR{18079}).

      \item Time differences (\code{"difftime"} objects) get a replacement
      and a \code{rep()} method to keep \code{"units"} consistent.
      (Thanks to a report and patch by Nicolas Bennett in \PR{18066}.)

      \item The \verb{\RdOpts} macro, setting defaults for \verb{\Sexpr}
      options in an Rd file, had been ineffective since \R 2.12.0: it
      now works again.
      (Thanks to a report and patch by Sebastian Meyer in \PR{18073}.)

      \item \code{mclapply} and \code{pvec} no longer accidentally terminate
      parallel processes started before by \code{mcparallel} or related
      calls in package \pkg{parallel} (\PR{18078}).

      \item \code{grep} and other functions for evaluating (extended)
      regular expressions handle in Unicode also strings not explicitly
      flagged UTF-8, but flagged native when running in UTF-8 locale.

      \item Fixed a crash in \code{fifo} implementation on Windows
      (\PR{18031}).

      \item Binary mode in \code{fifo} on Windows is now properly detected
      from argument \code{open} (\PR{15600}, \PR{18031}).
    }
  }
}

\section{\Rlogo Changes in R 4.0.5}{
  \subsection{Bug Fixes}{
    \itemize{
      \item The change to the internal table in \R 4.0.4 for
      \code{iswprint} has been reverted: it contained some errors in
      printability of \sQuote{East Asian} characters.

      \item For packages using \samp{LazyData}, \command{R CMD build}
      ignored the \option{--resave-data} option and the
      \samp{BuildResaveData} field of the \file{DESCRIPTION} file (in \R
      versions 4.0.0 to 4.0.4).
    }
  }
}

\section{\Rlogo Changes in R 4.0.4}{

  \subsection{New Features}{
    \itemize{
      \item File \file{share/texmf/tex/latex/jss.cls} has been updated
      to work with LaTeX versions since Oct 2020.

      \item Unicode character width tables (as used by
      \code{nchar(, type = "w")}) have been updated to Unicode 12.1
      by \I{Brodie Gaslam} (\PR{17781}), including many emoji.

      \item The internal table for \code{iswprint} (used on Windows,
      macOS and \I{AIX}) has been updated to include many recent Unicode
      characters.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item If an external BLAS is specified by \option{--with-blas=foo}
      or \emph{via} environment variable \env{BLAS_LIBS} is not found,
      this is now a configuration error.  The previous behaviour was not
      clear from the documentation: it was to continue the search as if
      \option{--with-blas=yes} was specified.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{all.equal(x,y)} now \dQuote{sees} the two different
      \code{NA}s in factors, thanks to Bill Dunlap and others in
      \PR{17897}.

      \item \code{(~ NULL)[1]} and similar formula subsetting now works,
      thanks to a report and patch by \I{Henrik Bengtsson} in \PR{17935}.
      Additionally, subsetting leaving an empty formula now works too,
      thanks to suggestions by \I{Suharto Anggono}.

      \item \code{.traceback(n)} keeps source references again, as before
      \R 4.0.0, fixing a regression; introduced by the \PR{17580}, reported
      including two patch proposals by \I{Brodie Gaslam}.

      \item \code{unlist(plst, recursive=FALSE)} no longer drops content
      for pairlists with list components, thanks to the report and patch
      by \I{Suharto Anggono} in \PR{17950}.

      \item \code{iconvlist()} now also works on \I{MUSL} based (Linux)
      systems, from a report and patch suggestion by \I{Wesley Chan} in
      \PR{17970}.

      \item \code{round()} and \code{signif()} no longer tolerate wrong
      argument names, notably in 1-argument calls; reported by Shane
      Mueller on R-devel (mailing list); later reported as \PR{17976}.

      \item \code{.Machine} has \code{longdouble.*} elements only if
      \code{capabilities("long.double")} is true, as documented.
      (Previously they were included if the platform had \code{long
	double} identical to \code{double}, as ARM does.)

      \item \code{p.adjust(numeric(), n=0)} now works, fixing \PR{18002}.

      \item \code{identical(x,y)} no longer prints "Unknown Type .." for
      \code{typeof(x) == "..."} objects.

      \item Fix \I{(auto-)\code{print()}ing} of named complex vectors, see
      \PR{17868} and \PR{18019}.

      \item \code{all.equal(<language>, <...>)} now works, fixing \PR{18029}.

      \item \code{as.data.frame.list(L, row.names=NULL)} now behaves in line
      with \code{data.frame()}, disregarding names of components of
      \code{L}, fixing \PR{18034}, reported by \I{Kevin Tappe}.

      \item \code{checkRdaFiles(ff)$version} is now correct also when
      \code{ff} contains files of different versions, thanks to a report
      and patch from Sebastian Meyer in \PR{18041}.

      \item macOS: Quartz device live drawing could fail (no plot is shown)
      if the system changes the drawing context after view update (often
      the case since macOS \I{Big Sur}). System log may show
      \I{"CGContextDelegateCreateForContext: invalid context"} error.
    }
  }
}

\section{\Rlogo Changes in R 4.0.3}{

  \subsection{New Features}{
    \itemize{
      \item On platforms using \command{configure} option
      \option{--with-internal-tzcode}, additional values
      \code{"internal"} and (on macOS only) \code{"macOS"} are accepted
      for the environment variable \env{TZDIR}.  (See \code{?TZDIR}.)

      On macOS, \code{"macOS"} is used by default if the system timezone
      database is a newer version than that in the \R installation.

      \item When \code{install.packages(type = "source")} fails to find
       a package in a repository it mentions package versions which are
       excluded by their \R version requirement and links to hints on
       why a package might not be found.

       \item The default value for \code{options("timeout")} can be set
       from environment variable \env{R_DEFAULT_INTERNET_TIMEOUT}, still
       defaulting to 60 (seconds) if that is not set or invalid.

       This may be needed when child \R processes are doing downloads,
       for example during the installation of source packages which
       download jars or other forms of data.
     }
  }

  \subsection{Link-Time Optimization on a Unix-Alike}{
    \itemize{
      \item There is now support for parallelized Link-Time Optimization
      (\abbr{LTO}) with GCC and for \sQuote{thin} \abbr{LTO} with
      \command{clang} \emph{via} setting the \samp{LTO} macro.

      \item There is support for setting a different \abbr{LTO} flag for the
      Fortran compiler, including to empty when mixing \command{clang}
      and \command{gfortran} (as on macOS).  See file \file{config.site}.

      \item There is a new \samp{LTO_LD} macro to set linker options for
      \abbr{LTO} compilation, for example to select an alternative linker or
      to parallelize thin \abbr{LTO}.
    }
  }

    \subsection{Deprecated and Defunct}{
    \itemize{

      \item The \code{LINPACK} argument to \code{chol.default()},
      \code{chol2inv()}, \code{solve.default()} and \code{svd()} has been
      defunct since \R 3.1.0.  Using it now gives a warning which will
      become an error in \R 4.1.0.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item The code mitigating stack overflow with PCRE regexps on very
      long strings is enabled for PCRE2 < 10.30 also when \abbr{JIT} is enabled,
      since stack overflows have been seen in that case.
      %% Ubuntu 16.04LTS has PCRE2 10.21

      \item Fix to correctly show the group labels in \code{dotchart()}
      (which where lost in the \code{ylab} improvement for \R 4.0.0).

      \item \code{addmargins(*, ..)} now also works when \code{fn()} is a
      local function, thanks to bug report and patch \PR{17124} from Alex
      Bertram.

      \item \code{rank(x)} and hence \code{sort(x)} now work when \code{x}
      is an object (as per \code{is.object(x)}) of type \code{"raw"}
      \emph{and} provides a valid \code{`[`} method, e.g., for
      \code{gmp::as.bigz(.)} numbers.

      \item \code{chisq.test(*, simulate.p.value=TRUE)} and
      \code{r2dtable()} now work correctly for large table entries (in the
      millions).  Reported by Sebastian Meyer and investigated by more
      helpers in \PR{16184}.

      \item Low-level socket read/write operations have been fixed to
      correctly signal communication errors. Previously, such errors could
      lead to a segfault due to invalid memory access. Reported
      and debugged by \I{Dmitriy Selivanov} in \PR{17850}.

      \item \code{quantile(x, pr)} works more consistently for \code{pr}
      values slightly outside [0,1], thanks to \I{Suharto Anggono}'s \PR{17891}.

      Further, \code{quantile(x, prN, names=FALSE)} now works even when
      \code{prN} contains \code{NA}s, thanks to \I{Anggono}'s \PR{17892}.
      Ditto for ordered factors or \code{Date} objects
      when \code{type = 1} or \code{3}, thanks to \PR{17899}.

      \item Internet access based on \I{libcurl}, including
      \code{curlGetHeaders()}, was not respecting the \code{"timeout"}
      option.  If this causes unanticipated timeouts, consider
      increasing the default by setting \env{R_DEFAULT_INTERNET_TIMEOUT}.

      \item \code{as.Date(<char>)} now also works with an initial
      \code{""}, thanks to Michael Chirico's \PR{17909}.

      \item \code{isS3stdGeneric(f)} now detects an S3 generic also when
      it is \code{trace()}d, thanks to \I{Gabe Becker}'s \PR{17917}.

      \item \code{R_allocLD()} has been fixed to return memory aligned for
      long double type \PR{16534}.

      \item \code{fisher.test()} no longer segfaults when called again after
      its internal stack has been exceeded \PR{17904}.

      \item Accessing a long vector represented by a compact integer
      sequence no longer segfaults (reported and debugged by Hugh
      Parsonage).

      \item \code{duplicated()} now works also for strings with multiple
      encodings inside a single vector \PR{17809}.

      \item \code{phyper(11, 15, 0, 12, log.p=TRUE)} no longer gives
      \code{NaN}; reported as \PR{17271} by \I{Alexey Stukalov}.

      \item Fix incorrect calculation in \code{logLik.nls()} \PR{16100}, patch
      from Sebastian Meyer.

      \item A very old bug could cause a segfault in \code{model.matrix()}
      when terms involved logical variables.  Part of \PR{17879}.

      \item \code{model.frame.default()} allowed \code{data = 1}, leading to
      involuntary variable capture (rest of \PR{17879}).

      \item \code{tar()} no longer skips non-directory files, thanks to a
      patch by Sebastian Meyer, fixing the remaining part of \PR{16716}.
    }
  }
}


\section{\Rlogo Changes in R 4.0.2}{

  \subsection{Utilities}{
    \itemize{
      \item \command{R CMD check} skips vignette re-building (with a
      warning) if the \samp{VignetteBuilder} package(s) are not available.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item Paths with non-ASCII characters caused problems for
      package loading on Windows \PR{17833}.

      \item Using \pkg{tcltk} widgets no longer crashes R on
      Windows.

      \item \code{source(*, echo=TRUE)} no longer fails in some cases with
      empty lines; reported by Bill Dunlap in \PR{17769}.

      \item \code{on.exit()} now correctly matches named arguments, thanks
      to \PR{17815} (including patch) by \I{Brodie Gaslam}.

      \item \code{regexpr(*, perl=TRUE)} no longer returns incorrect
      positions into text containing characters outside of the Unicode
      Basic Multilingual Plane on Windows.
    }
  }
}

\section{\Rlogo Changes in R 4.0.1}{

  \subsection{New Features}{
    \itemize{
      \item \code{paste()} and \code{paste0()} gain a new optional
      argument \code{recycle0}.  When set to true, zero-length
      arguments are recycled leading to \code{character(0)} after the
      \code{sep}-concatenation, i.e., to the empty string \code{""} if
      \code{collapse} is a string and to the zero-length value
      \code{character(0)} when \code{collapse = NULL}.

      A package whose code uses this should depend on \samp{R (>= 4.0.1)}.

      \item The \code{summary(<warnings>)} method now maps the counts
      correctly to the warning messages.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{aov(frml, ...)} now also works where the \code{formula}
      deparses to more than 500 characters, thanks to a report and patch
      proposal by \I{Jan Hauffa}.

      \item Fix a dozen places (code, examples) as \code{Sys.setlocale()}
      returns the new rather than the previous setting.

      \item Fix for adding two complex \pkg{grid} units via \code{sum()}.
      Thanks to \I{Gu Zuguang} for the report and \I{Thomas Lin Pedersen} for
      the patch.

      \item Fix \code{parallel::mclapply(..., mc.preschedule=FALSE)}
      to handle raw vector results correctly. \PR{17779}

      \item Computing the \code{base} value, i.e., 2, \dQuote{everywhere},
      now uses \code{FLT_RADIX}, as the original \file{machar} code looped
      indefinitely on the \I{ppc64} architecture for the \code{longdouble} case.

      \item In \R 4.0.0, \code{sort.list(x)} when \code{is.object(x)} was
      true, e.g., for \code{x <- I(letters)}, was accidentally using
      \code{method = "radix"}.  Consequently, e.g., \code{merge(<data.frame>)}
      was much slower than previously; reported in \PR{17794}.

      \item \code{plot(y ~ x, ylab = quote(y[i]))} now works, as e.g., for
      \code{xlab}; related to \PR{10525}.

      \item \code{parallel::detect.cores(all.tests = TRUE)} tries a
      matching OS name before the other tests (which were intended only
      for unknown OSes).

      \item Parse data for raw strings is now recorded correctly. Reported
      by \I{Gabor Csardi}.
    }
  }
}

\section{\Rlogo Changes in R 4.0.0}{

  \subsection{Significant User-Visible Changes}{
    \itemize{
      \item Packages need to be (re-)installed under this version
      (4.0.0) of \R.

      \item \code{matrix} objects now also inherit from class
      \code{"array"}, so e.g., \code{class(diag(1))} is \code{c("matrix",
	"array")}.  This invalidates code incorrectly assuming that
      \code{class(matrix_obj))} has length one.

      S3 methods for class \code{"array"} are now dispatched for
      \code{matrix} objects.

      \item There is a new syntax for specifying \emph{raw} character
      constants similar to the one used in C++: \code{r"(...)"} with
      \code{...} any character sequence not containing the sequence
      \samp{)"}. %}) \samp{*}: Rd-parser bug for \code{*}"
      This makes it easier to write strings that contain backslashes or
      both single and double quotes.  For more details see \code{?Quotes}.

      \item \R now uses a \samp{stringsAsFactors = FALSE} default, and
      hence by default no longer converts strings to factors in calls
      to \code{data.frame()} and \code{read.table()}.

      A large number of packages relied on the previous behaviour and
      so have needed/will need updating.

      \item The \code{plot()} S3 generic function is now in package
      \pkg{base} rather than package \pkg{graphics}, as it is
      reasonable to have methods that do not use the \pkg{graphics}
      package.  The generic is currently re-exported from the
      \pkg{graphics} namespace to allow packages importing it from
      there to continue working, but this may change in future.

      Packages which define S4 generics for \code{plot()} should be
      re-installed and package code using such generics from other
      packages needs to ensure that they are imported rather than rely
      on their being looked for on the search path (as in a namespace,
      the base namespace has precedence over the search path).
    }
  }

  \subsection{Reference Counting}{
    \itemize{
       \item Reference counting is now used instead of the \code{NAMED}
       mechanism for determining when objects can be safely mutated in
       base C code.  This reduces the need for copying in some cases and
       should allow further optimizations in the future.  It should
       help make the internal code easier to maintain.

       This change is expected to have almost no impact on packages
       using supported coding practices in their C/C++ code.
     }
   }

  \subsection{Migration to PCRE2}{
    \itemize{
       \item This version of \R is built against the PCRE2 library for
       Perl-like regular expressions, if available.  (On non-Windows
       platforms PCRE1 can optionally be used if PCRE2 is not available
       at build time.)  The version of PCRE in use can be obtained
       \emph{via} \code{extSoftVersion()}: PCRE1 (formerly known as
       \sQuote{PCRE}) has versions <= 8, PCRE2 versions >= 10.

       \item Making PCRE2 available when building \R from source is
       strongly recommended (preferably version 10.30 or later) as PCRE1
       is no longer developed: version 8.44 is
       \sQuote{likely to be the final release}.
       % https://lists.exim.org/lurker/message/20200212.174850.6edd8277.en.html

       \item PCRE2 reports errors for some regular expressions that were
       accepted by PCRE1.  A hyphen now has to be escaped in a character
       class to be interpreted as a literal (unless first or last in the
       class definition).  \samp{\\R}, \samp{\\B} and \samp{\\X} are no
       longer allowed in character classes (PCRE1 treated these as
       literals).

       \item Option \code{PCRE_study} is no longer used with PCRE2, and is
       reported as \code{FALSE} when that is in use.
     }
  }

  \subsection{New Features}{
    \itemize{
      \item \code{assertError()} and \code{assertWarning()} (in package
      \pkg{tools}) can now check for \emph{specific} error or warning
      classes \emph{via} the new optional second argument \code{classes}
      (which is not back compatible with previous use of an unnamed second
      argument).

      \item \code{DF2formula()}, the utility for the data frame method of
      \code{formula()}, now works without parsing and explicit evaluation,
      starting from \I{Suharto Anggono}'s suggestion in \PR{17555}.

      \item \code{approxfun()} and \code{approx()} gain a new argument
      \code{na.rm} defaulting to true.  If set to false, missing
      \code{y} values now propagate into the interpolated values.

      \item Long vectors are now supported as the \code{seq} argument of
      a \code{for()} loop.

      \item \code{str(x)} gets a new \code{deparse.lines} option with a
      default to speed it up when \code{x} is a large \code{call} object.

      \item The internal traceback object produced when an error is
      signalled (\code{.Traceback}), now contains the \code{call}s
      rather than the \emph{\code{deparse()}d} calls, deferring the
      deparsing to the user-level functions \code{.traceback()} and
      \code{traceback()}.  This fulfils the wish of \PR{17580}, reported
      including two patch proposals by \I{Brodie Gaslam}.

      \item \code{data.matrix()} now converts character columns to
      factors and from this to integers.

      \item \code{package.skeleton()} now explicitly lists all exports
      in the \file{NAMESPACE} file.

      \item New function \code{.S3method()} to register S3 methods in R
      scripts.

      \item \code{file.path()} has some support for file paths not in
      the session encoding, e.g.\sspace{}with UTF-8 inputs in a
      non-UTF-8 locale the output is marked as UTF-8.

      \item Most functions with file-path inputs will give an explicit
      error if a file-path input in a marked encoding cannot be
      translated (to the native encoding or in some cases on Windows to
      UTF-8), rather than translate to a different file path using
      escapes.  Some (such as \code{dir.exists()}, \code{file.exists()},
      \code{file.access()}, \code{file.info()}, \code{list.files()},
      \code{normalizePath()} and \code{path.expand()}) treat this like
      any other non-existent file, often with a warning.

      \item There is a new help document accessed by
      \code{help("file path encoding")} detailing how file paths with
      marked encodings are handled.

      \item New function \code{list2DF()} for creating data frames from
      lists of variables.

      \item \code{iconv()} has a new option \code{sub = "Unicode"} to
      translate UTF-8 input invalid in the \samp{to} encoding using
      \samp{<U+xxxx>} escapes.

      \item There is a new function \code{infoRDS()} providing information
      about the serialization format of a serialized object.

      \item S3 method lookup now by default skips the elements of the
      search path between the global and base environments.

      \item Added an argument \code{add_datalist(*, small.size = 0)} to
      allow the creation of a \file{data/datalist} file even when the
      total size of the data sets is small.

      \item The backquote function \code{bquote()} has a new argument
      \code{splice} to enable splicing a computed list of values into an
      expression, like \code{,@} in \abbr{LISP}'s backquote.

      \item The formula interface to \code{t.test()} and
      \code{wilcox.test()} has been extended to handle one-sample and
      paired tests.

      \item The \code{palette()} function has a new default set of
      colours (which are less saturated and have better accessibility
      properties).  There are also some new built-in palettes, which
      are listed by the new \code{palette.pals()} function.  These
      include the old default palette under the name \code{"R3"}. Finally,
      the new \code{palette.colors()} function allows a subset of
      colours to be selected from any of the built-in palettes.

      \item \code{n2mfrow()} gains an option \code{asp = 1} to specify the
      aspect ratio, fulfilling the wish and extending the proposal of
      Michael Chirico in \PR{17648}.

      \item For \code{head(x, n)} and \code{tail()} the default and
      other S3 methods notably for \emph{vector} \code{n}, e.g. to get a
      \dQuote{corner} of a matrix, has been extended to \code{array}'s
      of higher dimension thanks to the patch proposal by \I{Gabe Becker} in
      \PR{17652}.  Consequently, optional argument \code{addrownums} is
      deprecated and replaced by the (more general) argument
      \code{keepnums}.  An invalid second argument \code{n} now leads
      to typically more easily readable error messages.

      \item New function \code{.class2()} provides the full character
      vector of class names used for S3 method dispatch.

      \item Printing \code{methods(..)} now uses a new \code{format()} method.

      \item \code{sort.list(x)} now works for non-atomic objects
      \code{x} and \code{method = "auto"} (the default) or
      \code{"radix"} in cases \code{order(x)} works, typically via a
      \code{xtfrm()} method.

      \item Where they are available, \code{writeBin()} allows
      long vectors.% (those of length \eqn{\ge 2^{31}}{>= 2^31}).

      \item New function \code{deparse1()} produces one string, wrapping
      \code{deparse()}, to be used typically in
      \code{deparse1(substitute(*))}, e.g., to fix \PR{17671}.

      \item \code{wilcox.test()} enhancements: In the (non-paired)
      two-sample case, \code{Inf} values are treated as very large for
      robustness consistency.  If exact computations are used, the
      result now has \code{"exact"} in the \code{method} element of its
      return value.  New arguments \code{tol.root} and
      \code{digits.rank} where the latter may be used for stability to
      treat very close numbers as ties.

      \item \code{readBin()} and \code{writeBin()} now report an error
      for an invalid \code{endian} value.  The affected code needs to be
      fixed with care as the old undocumented behavior was to swap
      endianness in such cases.

      \item \code{sequence()} is now an S3 generic with an internally
      implemented default method, and gains arguments to generate more
      complex sequences.  Based on code from the \pkg{S4Vectors}
      Bioconductor package and the advice of \I{Hervé Pagès}.

      \item \code{print()}'s default method and many other methods (by
      calling the default eventually and passing \code{...}) now make
      use of a new optional \code{width} argument, avoiding the need for
      the user to set and reset \code{options("width")}.

      \item \code{memDecompress()} supports the RFC 1952 format
      (e.g.\sspace{}in-memory copies of \command{gzip}-compressed files)
      as well as RFC 1950.

      \item \code{memCompress()} and \code{memDecompress()} support long
      raw vectors for types \code{"gzip"} and \code{"zx"}.

      \item \code{sweep()} and \code{slice.index()} can now use names
      of dimnames for their \code{MARGIN} argument (\code{apply} has
      had this for almost a decade).

      \item New function \code{proportions()} and
      \code{marginSums()}. These should replace the unfortunately named
      \code{prop.table()} and \code{margin.table()}. They are drop-in
      replacements, but also add named-margin functionality. The old
      function names are retained as aliases for back-compatibility.

      \item Functions \code{rbinom()}, \code{rgeom()}, \code{rhyper()},
      \code{rpois()}, \code{rnbinom(),} \code{rsignrank()} and
      \code{rwilcox()} which have returned integer since \R 3.0.0 and hence
      \code{NA} when the numbers would have been outside the integer range,
      now return double vectors (without NAs, typically) in these cases.

      \item \code{matplot(x,y)} (and hence \code{matlines()} and
      \code{matpoints()}) now call the corresponding methods of
      \code{plot()} and \code{lines()}, e.g, when \code{x} is a
      \code{"Date"} or \code{"POSIXct"} object; prompted by Spencer Graves'
      suggestion.

      \item \code{stopifnot()} now allows customizing error messages via
      argument names, thanks to a patch proposal by \I{Neal Fultz} in \PR{17688}.

      \item  \code{unlink()} gains a new argument \code{expand} to disable
      wildcard and tilde expansion.  Elements of \code{x} of value
      \code{"~"} are now ignored.

      \item \code{mle()} in the \pkg{stats4} package has had its
      interface extended so that arguments to the negative
      log-likelihood function can be one or more vectors, with similar
      conventions applying to bounds, start values, and parameter values
      to be kept fixed.  This required a minor extension to class
      \code{"mle"}, so saved objects from earlier versions may need to
      be recomputed.

      \item The default for \code{pdf()} is now
      \code{useDingbats = FALSE}.

      \item The default fill colour for \code{hist()} and
      \code{boxplot()} is now \code{col = "lightgray"}.

      \item The default order of the levels on the y-axis for
      \code{spineplot()} and \code{cdplot()} has been reversed.

      \item If the \env{R_ALWAYS_INSTALL_TESTS} environment variable is
      set to a true value, \command{R CMD INSTALL} behaves as if
      the \option{--install-tests} option is always specified. Thanks to
      Reinhold Koch for the suggestion.

      \item New function \code{R_user_dir()} in package \pkg{tools}
      suggests paths appropriate for storing \R-related user-specific
      data, configuration and cache files.

      \item \code{capabilities()} gains a new logical option \code{Xchk}
      to avoid warnings about X11-related capabilities.

      \item The internal implementation of \pkg{grid} units has changed,
      but the only visible effects at user-level should be
      \itemize{
	\item a slightly different print format for some units
	(especially unit arithmetic),
	\item faster performance (for unit operations) and
	\item two new functions \code{unitType()} and \code{unit.psum()}.
      }
      Based on code contributed by \I{Thomas Lin Pedersen}.

      \item When internal dispatch for \code{rep.int()}
      and \code{rep_len()} fails, there is an attempt to dispatch on the
      equivalent call to \code{rep()}.

      \item Object \code{.Machine} now contains new \code{longdouble.*}
      entries (when \R uses long doubles internally).

      \item \code{news()} has been enhanced to cover the news on \R 3.x
      and 2.x.

       \item For consistency, \code{N <- NULL; N[[1]] <- val} now turns
       \code{N} into a \code{list} also when \code{val)} has length one.
       This enables \code{dimnames(r1)[[1]] <- "R1"} for a 1-row matrix
       \code{r1}, fixing \PR{17719} reported by \I{Serguei Sokol}.

       \item \code{deparse(..)}, \code{dump(..)}, and \code{dput(x,
	 control = "all")} now include control option \code{"digits17"}
       which typically ensures 1:1 invertibility.  New option
       \code{control = "exact"} ensures numeric exact invertibility
       via \code{"hexNumeric"}.

      \item When loading data sets via \code{read.table()},
       \code{data()} now uses \samp{LC_COLLATE=C} to ensure
       locale-independent results for possible string-to-factor
       conversions.

      \item A server socket connection, a new connection type
      representing a listening server socket, is created via
      \code{serverSocket()} and can accept multiple socket connections
      via \code{socketAccept()}.

      \item New function \code{socketTimeout()} changes the connection
      timeout of a socket connection.

      \item The time needed to start a homogeneous \samp{PSOCK} cluster on
      \samp{localhost} with many nodes has been significantly reduced
      (package \pkg{parallel}).

      \item New \code{globalCallingHandlers()} function to establish
      global condition handlers.  This allows registering default
      handlers for specific condition classes. Developed in
      collaboration with Lionel Henry.

      \item New function \code{tryInvokeRestart()} to invoke a specified
      restart if one is available and return without signaling an error
      if no such restart is found.  Contributed by Lionel Henry in
      \PR{17598}.

      \item \code{str(x)} now shows the length of \code{attributes} in some
      cases for a data frame \code{x}.

      \item \code{Rprof()} gains a new argument \code{filter.callframes}
      to request that intervening call frames due to lazy evaluation or
      explicit \code{eval()} calls be omitted from the recorded profile
      data.  Contributed by Lionel Henry in \PR{17595}.

      \item The handling of \code{$\{FOO-bar\}} and \code{$\{FOO:-bar\}}
      in \file{Renviron} files now follows POSIX shells (at least on a
      Unix-alike), so the first treats empty environment variables as
      set and the second does not.  Previously both ignored empty
      variables.  There are several uses of the first form in
      \file{etc/Renviron}.

      \item New \code{classes} argument for \code{suppressWarnings()}
      and \code{suppressMessages()} to selectively suppress only
      warnings or messages that inherit from particular classes.
      Based on patch from Lionel Henry submitted with \PR{17619}.

      \item New function \code{activeBindingFunction()} retrieves the
      function of an active binding.

      \item New \code{"cairoFT"} and \code{"pango"} components in the
      output of \code{grSoftVersion()}.

      \item New argument \code{symbolfamily} in \I{cairo}-based graphics
      devices and new function \code{cairoSymbolFont()} that can be used
      to provide the value for that argument.
    }
  }% end{ New Features }

  \subsection{Windows}{
    \itemize{
      \item \command{Rterm} now works also when invoked from \abbr{MSYS2}
      terminals.  Line editing is possible when command \command{winpty} is
      installed.

      \item \code{normalizePath()} now resolves symbolic links and
      normalizes case of long names of path elements in case-insensitive
      folders (\PR{17165}).

      \item \code{md5sum()} supports UTF-8 file names with characters
      that cannot be translated to the native encoding (\PR{17633}).

      \item \command{Rterm} gains a new option \option{--workspace} to
      specify the workspace to be restored.  This allows equals to be
      part of the name when opening \emph{via} Windows file associations
      (reported by \I{Christian Asseburg}).

      \item \command{Rterm} now accepts \code{ALT+xxx} sequences also
      with \I{NumLock} on.  Tilde can be pasted with an Italian keyboard
      (\PR{17679}).

      \item \R falls back to copying when junction creation fails during
      package checking (patch from Duncan Murdoch).
   }
  }

  \subsection{Deprecated and Defunct}{
    \itemize{
      \item Make macro \samp{F77_VISIBILITY} has been removed
      and replaced by \samp{F_VISIBILITY}.

      \item Make macros \samp{F77}, \samp{FCPIFCPLAGS} and
      \samp{SHLIB_OPENMP_FCFLAGS} have been removed and replaced by
      \samp{FC}, \samp{FPICFLAGS} and \samp{SHLIB_OPENMP_FFLAGS}
      respectively.  (Most \command{make} programs will set \samp{F77}
      to the value of \samp{FC}, which is set for package compilation.
      But portable code should not rely on this.)

      \item The deprecated support for specifying C++98 for package
      installation has been removed.

      \item \command{R CMD config} no longer knows about the
      unused settings \samp{F77} and \samp{FCPIFCPLAGS}, nor
      \samp{CXX98} and similar.

      \item Either PCRE2 or PCRE1 >= 8.32 (Nov 2012) is required: the
      deprecated provision for 8.20--8.31 has been removed.

      \item Defunct functions \code{mem.limits()}, \code{.readRDS()},
      \code{.saveRDS()}, \code{.find.package()}, and \code{.path.package()}
      from package \pkg{base}
      and \code{allGenerics()}, \code{getAccess()}, \code{getAllMethods()},
      \code{getClassName()}, \code{getClassPackage()}, \code{getExtends()},
      \code{getProperties()}, \code{getPrototype()},
      \code{getSubclasses()}, \code{getVirtual()}, \code{mlistMetaName()},
      \code{removeMethodsObject()}, \code{seemsS4Object()},
      \code{traceOff()}, and \code{traceOn()} from \pkg{methods} have been
      removed.
    }
  }

  \subsection{C-Level Facilities}{
    \itemize{
      \item \code{installChar} is now remapped in \file{Rinternals.h} to
      \code{installTrChar}, of which it has been a wrapper since
      \R\sspace{}3.6.0.  Neither are part of the API, but packages using
      \code{installChar} can replace it if they depend on \samp{R >= 3.6.2}.

      \item Header \file{R_ext/Print.h} defines \samp{R_USE_C99_IN_CXX}
      and hence exposes \code{Rvprintf} and \code{REvprintf} if used
      with a C++11 (or later) compiler.

      \item There are new Fortran subroutines \code{dblepr1},
      \code{realpr1} and \code{intpr1} to print a scalar variable
      (\command{gfortran} 10 enforces the distinction between scalars
      and length-one arrays).  Also \code{labelpr} to print just a label.

      \item \code{R_withCallingErrorHandler} is now available for
      establishing a calling handler in C code for conditions inheriting
      from class \code{error}.
    }
  }

  \subsection{Installation on a Unix-Alike}{
    \itemize{
      \item User-set \samp{DEFS} (e.g., in \file{config.site}) is now
      used for compiling packages (including base packages).

      \item There is a new variant option \option{--enable-lto=check}
      for checking consistency of BLAS/LAPACK/LINPACK calls --- see
      \sQuote{Writing R Extensions}.

      \item A C++ compiler default is set only if the C++11 standard is
      supported: it no longer falls back to C++98.

      \item PCRE2 is used if available.  To make use of PCRE1 if PCRE2
      is unavailable, configure with option \option{--with-pcre1}.

      \item The minimum required version of \code{libcurl} is now 7.28.0
      (Oct 2012).

      \item New make target \command{distcheck} checks
      \itemize{
	\item \R can be rebuilt from the tarball created by
	\command{make dist},
	\item the build from the tarball passes \command{make check-all},
	\item the build installs and uninstalls,
	\item the source files are properly cleaned by \command{make distclean}.
      }
    }
  }

  \subsection{Utilities}{
    \itemize{
      \item \command{R --help} now mentions the option \command{--no-echo}
      (renamed from \command{--slave}) and its previously undocumented
      short form \command{-s}.

      \item \command{R CMD check} now optionally checks
      \command{configure} and \command{cleanup} scripts for
      non-\I{Bourne}-shell code (\sQuote{bashisms}).

      \item \command{R CMD check --as-cran} now runs \verb{\donttest}
      examples (which are run by \code{example()}) instead of
      instructing the tester to do so.  This can be temporarily
      circumvented during development by setting environment variable
      \env{_R_CHECK_DONTTEST_EXAMPLES_} to a false value.
    }
  }

  \subsection{Package Installation}{
    \itemize{
      \item There is the beginnings of support for the recently approved
      C++20 standard, specified analogously to C++14 and C++17.  There is
      currently only limited support for this in compilers, with flags
      such as \option{-std=c++20} and \option{-std=c++2a}.  For the time
      being the \command{configure} test is of accepting one of these
      flags and compiling C++17 code.
    }
  }

  \subsection{Bug Fixes}{
    \itemize{
      \item \code{formula(x)} with \code{length(x) > 1} character vectors,
      is deprecated now.  Such use has been rare, and has \sQuote{worked}
      as expected in some cases only.  In other cases, wrong \code{x} have
      silently been truncated, not detecting previous errors.

      \item Long-standing issue where the X11 device could lose events
      shortly after startup has been addressed (\PR{16702}).

      \item The \code{data.frame} method for \code{rbind()} no longer
      drops \code{<NA>} levels from factor columns by default
      (\PR{17562}).

      \item \code{available.packages()} and hence \code{install.packages()}
      now pass their \code{...} argument to \code{download.file()},
      fulfilling the wish of \PR{17532}; subsequently,
      \code{available.packages()} gets new argument \code{quiet}, solving
      \PR{17573}.

      \item \code{stopifnot()} gets new argument \code{exprObject} to allow
      an \R object of class \code{expression} (or other \sQuote{language})
      to work more consistently, thanks to suggestions by \I{Suharto Anggono}.

      \item \code{conformMethod()} now works correctly in cases containing
      a \dQuote{\code{&&} logic} bug, reported by \I{Henrik Bengtsson}.  It now
      creates methods with \code{"missing"} entries in the signature.
      Consequently, \code{rematchDefinition()} is amended to use
      appropriate \code{.local()} calls with named arguments where needed.

      \item \code{format.default(*, scientific = FALSE)} now corresponds to
      a practically most extreme \code{options(scipen = n)} setting rather
      than arbitrary \code{n = 100}.

      \item \code{format(as.symbol("foo"))} now works (returning \code{"foo"}).

      \item \code{postscript(.., title = *)} now signals an error when
      the title string contains a character which would produce corrupt
      PostScript, thanks to \PR{17607} by \I{Daisuko Ogawa}.

      \item Certain \code{Ops} (notably comparison such as \code{==}) now
      also work for 0-length data frames, after reports by \I{Hilmar Berger}.

      \item \code{methods(class = class(glm(..)))} now warns more usefully
      and only once.

      \item \code{write.dcf()} no longer mangles field names (\PR{17589}).

      \item Primitive replacement functions no longer mutate a
      referenced first argument when used outside of a complex
      assignment context.

      \item  A better error message for \code{contour(*, levels = Inf)}.

      \item The return value of \code{contourLines()} is no longer
      \code{invisible()}.

      \item The Fortran code for calculating the \code{coefficients}
      component in \code{lm.influence()} was very inefficient. It has
      (for now) been replaced with much faster \R{} code (\PR{17624}).

      \item \code{cm.colors(n)} \emph{etc} no longer append the code for
      \code{alpha = 1}, \code{"FF"}, to all colors.  Hence all eight
      \code{*.colors()} functions and \code{rainbow()} behave
      consistently and have the same non-explicit default (\PR{17659}).

      \item \code{dnorm} had a problematic corner case with \code{sd ==
      -Inf} or negative \code{sd} which was not flagged as an error in
      all cases. Thanks to \I{Stephen D. Weigand} for reporting and
      \I{Wang Jiefei} for analyzing this; similar change has been made in
      \code{dlnorm()}.

      \item The optional \code{iter.smooth} argument of
      \code{plot.lm()}, (the \code{plot()} method for \code{lm} and
      \code{glm} fits) now defaults to \code{0} for all \code{glm} fits.
      Especially for binary observations with high or low fitted
      probabilities, this effectively deleted all observations of 1 or
      0.  Also, the type of residuals used in the \code{glm} case has
      been switched to \code{"pearson"} since deviance residuals do not
      in general have approximately zero mean.

      \item In \code{plot.lm}, Cook's distance was computed from unweighted
      residuals, leading to inconsistencies.  Replaced with usual weighted
      version. (\PR{16056})

      \item Time-series \code{ts(*, start, end, frequency)} with
      fractional \code{frequency} are supported more consistently;
      thanks to a report from \I{Johann Kleinbub} and analysis and patch by
      Duncan Murdoch in \PR{17669}.

      \item In case of errors \code{mcmapply()} now preserves attributes
      of returned \code{"try-error"} objects and avoids simplification,
      overriding \code{SIMPLIFY} to \code{FALSE}. (\PR{17653})

      \item \code{as.difftime()} gets new optional \code{tz = "UTC"}
      argument which should fix behaviour during
      daylight-savings-changeover days, fixing \PR{16764}, thanks to
      proposals and analysis by \I{Johannes Ranke} and \I{Kirill Müller}.

      \item \code{round()} does a better job of rounding
      \emph{\dQuote{to nearest}} by \emph{measuring} and
      \emph{\dQuote{to even}}; thanks to a careful algorithm originally
      prompted by the report from Adam Wheeler and then others, in
      \PR{17668}.  \cr \code{round(x, dig)} for \emph{negative} digits
      is much more rational now, notably for large \eqn{|dig|}.

      \item Inheritance information on S4 classes is maintained more
      consistently, particularly in the case of class unions (in part
      due to \PR{17596} and a report from Ezra Tucker).

      \item \code{is()} behaves more robustly when its argument
      \code{class2} is a \code{classRepresentation} object.

      \item The warning message when attempting to export an nonexistent
      class is now more readable; thanks to \I{Thierry Onkelinx} for
      recognizing the problem.

      \item \code{choose()} misbehaved in corner cases where it switched
      \code{n - k} for \code{k} and \code{n} was only \emph{nearly} integer
      (report from Erik Scott Wright).

      \item \code{mle()} in the \pkg{stats4} package had problems
      combining use of box constraints and fixed starting values (in
      particular, confidence intervals were affected).

      \item Operator \code{?} now has lower precedence than \code{=} to
      work as documented, so \code{=} behaves like \code{<-} in help
      expressions (\PR{16710}).

      \item \code{smoothEnds(x)} now returns \code{integer} type in
      \emph{both} cases when \code{x} is \code{integer}, thanks to a
      report and proposal by Bill Dunlap \PR{17693}.

      \item The \pkg{methods} package does a better job of tracking
      inheritance relationships across packages.

      \item \code{norm(diag(c(1, NA)), "2")} now works.

      \item \code{subset()} had problems with 0-col dataframes (reported
      by Bill Dunlap, \PR{17721}).

      \item Several cases of integer overflow detected by the
      \sQuote{undefined behaviour sanitizer} of \command{clang} 10 have
      been circumvented.  One in \code{rhyper()} may change the
      generated value for large input values.

      \item \code{dotchart()} now places the y-axis label (\code{ylab})
      much better, not overplotting labels, thanks to a report and
      suggestion by \I{Alexey Shipunov}.

      %% detected by clang-ASAN in examples/tests of adehabitatHR.
      \item A rare C-level array overflow in \code{chull()} has been
      worked around.

      \item Some invalid specifications of the day-of-the-year
      (\emph{via} \code{\%j}, e.g.\sspace{}day 366 in 2017) or week
      plus day-of-the-week are now detected by \code{strptime()}.
      They now return \code{NA} but give a warning as they may have
      given random results or corrupted memory in earlier versions of \R.

      \item \code{socketConnection(server = FALSE)} now respects the
      connection timeout also on Linux.

      \item \code{socketConnection(server = FALSE)} no longer leaks a
      connection that is available right away without waiting (e.g. on
      \samp{localhost}).

      \item Socket connections are now robust against spurious readability
      and spurious availability of an incoming connection.

      \item \code{blocking = FALSE} is now respected also on the server side
      of a socket connection, allowing non-blocking read operations.

      \item \code{anova.glm()} and \code{anova.glmlist()} computed
      incorrect score (\I{Rao}) tests in no-intercept cases. (\I{André
      Gillibert}, \PR{17735})

      \item \code{summaryRprof()} now should work correctly for the
      \code{Rprof(*, memory.profiling=TRUE)} case with small chunk size (and
      \code{"tseries"} or similar) thanks to a patch proposal by
      \I{Benjamin Tyner}, in \PR{15886}.

      \item \code{xgettext()} ignores strings passed to
      \code{ngettext()}, since the latter is handled by
      \code{xngettext()}. Thanks to \I{Daniele Medri} for the report and all
      the recent work he has done on the Italian translations.

      \item \code{data(package = "P")} for \code{P} in \pkg{base} and
      \pkg{stats} no longer reports the data sets from package
      \pkg{datasets} (which it did for back compatibility for 16 years),
      fixing \PR{17730}.

      \item \code{x[[Inf]]} (returning \code{NULL}) no longer leads to
      undefined behavior, thanks to a report by \I{Kirill Müller} in
      \PR{17756}.  Further, \code{x[[-Inf]]} and \code{x[[-n]]} now give
      more helpful error messages.

      \item \code{Gamma()} family sometimes had trouble storing
      link name \PR{15891}
    }
  }

  \subsection{Bug Fixes (Windows)}{
    \itemize{
      \item \code{Sys.glob()} now supports all characters
      from the Unicode Basic Multilingual Plane, no longer corrupting
      some (less commonly used) characters (\PR{17638}).

      \item \command{Rterm} now correctly displays
      multi-byte-coded characters representable in the current native
      encoding (at least on Windows 10 they were sometimes omitted,
      \PR{17632}).

      \item \code{scan()} issues with UTF-8 data when running in a \abbr{DBCS}
      locale have been resolved (\PR{16520}, \PR{16584}).

      \item \command{Rterm} now accepts enhanced/arrow keys also with
      \I{ConPTY}.

      \item \R can now be started \emph{via} the launcher icon in a
      user documents directory whose path is not representable in the
      system encoding.

      \item \code{socketConnection(server = FALSE)} now returns instantly
      also on Windows when connection failure is signalled.

      \item Problems with UTF-16 surrogate pairs have been fixed in
      several functions, including \command{tolower()} and
      \command{toupper()} (\PR{17645}).
    }
  }
}

\section{Changes in previous versions}{
  \itemize{
    \item Older news can be found in text format in files
    \ifelse{html}{\href{../NEWS.0}{NEWS.0}, \href{../NEWS.1}{NEWS.1},
      \href{../NEWS.2}{NEWS.2} and
      \href{../NEWS.3}{NEWS.3}}{\file{NEWS.0}, \file{NEWS.1},
      \file{NEWS.2} and \file{NEWS.3}}
    in the \file{doc} directory.  News in HTML format for
    \R  versions 3.x and from 2.10.0 to 2.15.3 are available at
    \ifelse{html}{\url{NEWS.3.html}}{\file{doc/html/NEWS.3.html}}
    and
    \ifelse{html}{\url{NEWS.2.html}}{\file{doc/html/NEWS.2.html}}.
  }
}
