Computational Test for Conditional Independence

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Documentation for package ‘CCI’ version 0.2.1

• DESCRIPTION file.
• Package NEWS.

Help Pages

add_interaction_terms	Creates interaction terms for specified variables in a data frame Interaction terms are named as '<var1>_int_<var2>' (e.g., 'Z1_int_Z2' for the product of 'Z1' and 'Z2').
add_poly_terms	Creates polynomial terms for specified variables in a data frame Polynomial terms are named as '<variable>_d_<degree>' (e.g., 'Z1_d_2' for the square of 'Z1').
BinaryData	Generate Binary Data
BivMultinominal	Generate Bivariate Multinomial Categorical Data
BivNonLinearCategorization	Generate Bivariate Nonlinear Categorical Data
build_formula	Build an expanded formula with poly and interaction terms
CCI	Computational test for conditional independence based on ML and Monte Carlo Cross Validation
CCI.direction	Choose Direction for testing for the CCI test
CCI.pretuner	CCI tuner function for CCI test
CCI.test	Computational test for conditional independence based on ML and Monte Carlo Cross Validation
check_formula	Check the formula statement
clean_formula	Clean and Reformat Formula String
ComplexCategorization	Generate Complex Categorical Data
ExpLogData	Generate Categorical Data Based on Exponential and Logarithmic Functions
ExpLogThreshold	Generate Exponential and Logarithmic Data
ExponentialNoise	Generate Data with Exponential Noise
get_pvalues	P-value Calculation Based on Null Distribution and Test Statistic
get_tuned_params	Get the best parameters after tuning with CCI.tuner
GridPartition	Generate Grid Partitioned Data
HardCase	Generate Hard Case Data with Two Z Variables
InteractiondData	Generate Categorical Data Based on Interactions
NonLinearCategorization	Generate Nonlinear Categorical Data (Univariate)
NonLinearData	Generate Nonlinear Categorical Data (Bivariate)
NonLinNormal	Generate Nonlinear Normal Data
NonLinNormalZs	Generate High-dimensional Nonlinear Normal Data
NormalData	Generate Normal Data for Conditional Independence Testing
perm.test	Permutation Test for Conditional Independence
plot.CCI	Plot for CCI testing
PoissonNoise	Generate Data with Poisson Noise
PolyData	Generate Categorical Polynomial Data
PolyDecision	Generate Polynomial Decision Boundary Data
print.CCI	Print and summary methods for the CCI class
print.summary.CCI	Print and summary methods for the CCI class
QQplot	QQ-plot for multiple testing in CCI
QuadThresh	Generate Quadratic Threshold Data
reports	Print and summary methods for the CCI class
SinCosThreshold	Generate Sinusoidal and Cosine Data
SineGaussian	Generate Sine-Gaussian Data (Univariate)
SineGaussianBiv	Generate Sine-Gaussian Data (Bivariate)
SineGaussianNoise	Generate Sine-Gaussian Data (Bivariate)
summary.CCI	Print and summary methods for the CCI class
test.gen	Generate the Test Statistic or Null Distribution Using Permutation
TrigData	Generate Categorical Trigonometric Data
tuner	CCI tuner function for CCI test
UniformNoise	Generate Data with Uniform Noise
wrapper_ranger	Random Forest wrapper for CCI
wrapper_svm	SVM wrapper for CCI
wrapper_xgboost	Extreme Gradient Boosting wrapper for CCI