# Tidy Clean-Room Psychological Network Modeling

## Documentation for package ‘psychnets’ version 0.5.2

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

$.psychnet | Back-compatible field access for a psychnet object
as.data.frame.psychnet | Tidy edge list for a psychnet network
as.data.frame.psychnet_bootstrap | Tidy a network bootstrap
as.data.frame.psychnet_group | Per-group psychometric networks
as.data.frame.psychnet_multilevel | Within / between event-data networks
as.data.frame.psychnet_result_group | Per-group framework results
certificate | Correctness certificate of a fitted network
condition | Condition a moderated network at a moderator value
cor_auto | Automatic correlation matrix (polychoric / polyserial / Pearson)
cor_network | Correlation network
dichotomize | Dichotomize numeric columns to 0/1
difference_test | Bootstrapped difference test for edges or centralities
ebic_glasso | EBIC-regularized Gaussian graphical model (graphical lasso)
event_frequencies | Action frequencies from an event log
ggm_modselect | Stepwise Gaussian graphical model selection (ggmModSelect)
ggm_support_kkt | Constrained Gaussian-MRF (graph-restricted MLE) stationarity residual
glasso_kkt | Graphical-lasso stationarity (KKT) residual
glm_lasso_kkt | Stationarity (KKT) residual of an L1-penalized GLM fit
huge_network | Nonparanormal graphical model (huge)
ising_fit | Ising network for binary data
ising_sampler | Unregularized Ising network for binary data
lmg_certificate | Relative-importance (LMG / Shapley) certificate
logo_network | Local-Global sparse inverse covariance (LoGo)
mgm_fit | Mixed graphical model
net_aggregate | Aggregate a network's communities into super-nodes
net_boot | Bootstrap a psychometric network
net_bridge | Bridge centrality
net_casedrop_reliability | Edge-weight stability coefficient (case-dropping subset bootstrap)
net_centralities | Node centrality
net_clustering | Weighted clustering coefficients
net_compare | Network Comparison Test
net_crosswalk | Argument crosswalk: psychnet as a substitute for qgraph / IsingFit / mgm
net_edge_betweenness | Edge betweenness centrality
net_predict | Node predictability
net_smallworld | Small-world index
net_split_reliability | Split-half reliability of the network edge structure
net_stability | Centrality-stability coefficient (case-dropping subset bootstrap)
node_predictability | Node predictability as a plotting vector
pcor_network | Partial correlation network
plot.psychnet | Plot a psychnet network
plot.psychnet_bootstrap | Plot a network bootstrap
plot.psychnet_bridge | Plot bridge centrality
plot.psychnet_casedrop | Plot edge-weight case-dropping stability
plot.psychnet_centrality | Plot node centralities
plot.psychnet_difference | Plot a bootstrapped difference test
plot.psychnet_nct | Plot a Network Comparison Test
plot.psychnet_reliability | Plot split-half reliability
plot.psychnet_stability | Plot centrality stability (case-dropping)
print.psychnet | Print a psychnet network
print.psychnet_bootstrap | Print a network bootstrap
print.psychnet_casedrop | Print an edge-weight stability result
print.psychnet_group | Per-group psychometric networks
print.psychnet_moderated | Print a moderated MGM fit
print.psychnet_multilevel | Within / between event-data networks
print.psychnet_nct | Print a Network Comparison Test
print.psychnet_redundancy | Print a redundancy result
print.psychnet_reliability | Print a split-half reliability result
print.psychnet_result_group | Per-group framework results
print.psychnet_stability | Print a centrality-stability result
psychnet | Estimate a psychometric network
psychnet_group | Per-group psychometric networks
redundancy | Detect redundant node pairs ("goldbricker")
relimp_network | Relative-importance network (LMG / Shapley)
SRL | Self-regulated-learning (MSLQ) construct scores simulated by large language models
SRL_Claude | Self-regulated-learning (MSLQ) construct scores simulated by large language models
SRL_Gemini | Self-regulated-learning (MSLQ) construct scores simulated by large language models
SRL_GPT | Self-regulated-learning (MSLQ) construct scores simulated by large language models
SRL_LLaMa | Self-regulated-learning (MSLQ) construct scores simulated by large language models
SRL_Mistral | Self-regulated-learning (MSLQ) construct scores simulated by large language models
summary.psychnet | Summarize a psychnet network
summary.psychnet_group | Per-group psychometric networks
tmfg_certificate | Structural certificate for a TMFG network
tmfg_network | Triangulated Maximally Filtered Graph (TMFG)