Multi-Barrier Approach for Water Reuse Risk Assessment
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Documentation for package ‘ambre’ version 2.1.2
Help Pages
| annual_cost | Annual cost |
| collective_treatment_cost_calculation | Collective treatment cost calculation |
| config_ambre | config_ambre |
| create_random_distribution | Create random distribution |
| create_scenario | Create Exposure Scenario |
| create_scenario_from_df | Create Exposure Scenario from a data.frame |
| dalys_calculation | Dalys calculation |
| distribution_repeater | Helper function: distribution repeater |
| dr.betapoisson | Dose-response model: beta-poisson |
| dr.expo | Dose-response model: exponential |
| enumeration | Enumerate Elements |
| final_dose_calculation | Final dose calculation |
| generate_random_values | Create random distribution based on configuration file |
| get_exposure_value_or_stop | Get exposure value or stop |
| get_infection_prob | Get infection probability values |
| get_risk_total | Get risk total |
| get_scheme_events_wide | Calculate Wide-Format Treatment Scheme Events |
| get_tbl_risk | Get table risk |
| get_treatment_data | Simulate treatment data for pathogen processes |
| illness_probability_calculation | Illness probability calculation |
| infection_probability_calculation | Infection probability calculation |
| inflow_concentration | Inflow concentration |
| inflow_concentration_custom | Inflow concentration custom |
| initial_dose_calculation | Initial dose concentration |
| irrigation_need_calculation | Irrigation need calculation |
| percentage_irrigation_need | Percentage irrigation need |
| perimeter_calculation | Perimeter calculation |
| plot_comparison_qmra_initial_vs_supplementary_processes | Plot comparison QMRA calculation with initial vs supplementary processes |
| plot_dalys | Plot dalys |
| plot_infection_probability | Plot infection probability |
| plot_inflow | Plot inflow concentration |
| plot_logreduction | Plot log reduction |
| plot_volumes | Plot volume |
| process_cost_calculation | Barrier Cost Calculation |
| query_barrier | Barrier Query |
| query_crop | Crop Query |
| query_crop_height | Query crop height |
| query_exp_path | Path Query |
| query_frequency | Query frequency |
| query_irrigation_need | Query irrigation need |
| query_matrix | Query Matrix |
| query_pathogen | Pathogen Query |
| query_pop | Population Query |
| query_volume | Query volume |
| regulation_matrix_concentration | Concentration reduction matrix calculation |
| regulation_matrix_log | Log reduction matrix calculation |
| retrieve_specific_barrier | Apply barriers' specific log-reduction to a config |
| run_economic_analysis | Run economic analysis |
| run_qmra_custom | Run QMRA custom |
| run_qmra_initial_situation | Run QMRA on initial situation |
| run_qmra_learning_case | QMRA on learning case |
| run_qmra_supplementary_process | Run QMRA on addition process |
| simulate_exposure | Simulate: exposure |
| simulate_inflow | Simulate: inflow |
| simulate_treatment | Simulate Treatment |
| total_area_calculation | Total area |
| total_investment_cost | Total investment cost |
| total_irrigation_need | Total irrigation need |
| update_concentration | Update concentration with desired value |
| update_frequency | Frequency update |
| update_frequency_with_desired_value | Updated frequency with desired value |
| update_logreduction_decay | Update log reduction for decay barrier |
| update_logreduction_path | Update log reduction for specific path |
| update_logreduction_specific_barrier | Update log reduction with specific value |
| update_monte_carlo | Update monte carlo value |
| update_pathogen | Pathogen update |
| update_treatment_scheme | Update treatment scheme |
| update_volume | Volume update |
| update_volume_with_desired_value | Update volume with desired value |
| water_price | Water charge |