In-Silico Knockout Experiments from Single-Cell Gene Regulatory Networks

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Documentation for package ‘scTenifoldKnk’ version 2.0.0

• DESCRIPTION file.
• Package NEWS.

Help Pages

dRegulation	Evaluates gene differential regulation based on manifold alignment distances.
heatKernel	Spectral heat kernel of a gene-gene matrix
hkManifoldAlignment	Heat-kernel (hk) manifold alignment for in-silico knockouts
knockoutDirection	Direction of the response to an in-silico knockout
perturbationMap	Map of transcriptome-wide perturbation profiles
plotKO	Plot KO network
scQC	Performs single-cell data quality control
scTenifoldKnk	scTenifoldKNK