* using log directory 'd:/Rcompile/CRANpkg/local/4.3/malariaAtlas.Rcheck'
* using R version 4.3.3 (2024-02-29 ucrt)
* using platform: x86_64-w64-mingw32 (64-bit)
* R was compiled by
    gcc.exe (GCC) 12.3.0
    GNU Fortran (GCC) 12.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'malariaAtlas/DESCRIPTION' ... OK
* this is package 'malariaAtlas' version '1.6.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'malariaAtlas' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s] OK
* checking whether the package can be unloaded cleanly ... [1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s] OK
* checking whether the namespace can be unloaded cleanly ... [2s] OK
* checking loading without being on the library search path ... [2s] OK
* checking startup messages can be suppressed ... [2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [10s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [4s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [22s] ERROR
  Running 'testthat.R' [21s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(malariaAtlas)
  Loading required package: ggplot2
  > 
  > test_check("malariaAtlas")
  [ FAIL 2 | WARN 1 | SKIP 47 | PASS 31 ]
  
  ══ Skipped tests (47) ══════════════════════════════════════════════════════════
  • On CRAN (47): 'test_as.class.R:7:3', 'test_as.class.R:28:3',
    'test_autoplot.MAPraster.R:8:3', 'test_autoplot.MAPraster.R:27:3',
    'test_extractRaster.R:6:3', 'test_extractRaster.R:20:3',
    'test_extractRaster.R:32:3', 'test_extractRaster.R:52:3',
    'test_extractRaster.R:71:3', 'test_extractRaster.R:90:3',
    'test_extractRaster.R:112:3', 'test_extractRaster.R:123:3',
    'test_extractRaster.R:132:3', 'test_extractRaster.R:140:3',
    'test_extractRaster.R:149:3', 'test_extractRaster.R:157:3',
    'test_extractRaster.R:165:3', 'test_extractRaster.R:173:3',
    'test_extractRaster.R:185:3', 'test_extractRaster.R:196:3',
    'test_getPR.R:7:3', 'test_getPR.R:97:3', 'test_getPR.R:109:3',
    'test_getPR.R:121:3', 'test_getRaster.R:5:3', 'test_getRaster.R:77:3',
    'test_getRaster.R:90:3', 'test_getRaster.R:99:3', 'test_getRaster.R:110:3',
    'test_getRaster.R:133:3', 'test_getShp.R:5:3', 'test_getShp.R:47:3',
    'test_getShp.R:54:5', 'test_getShp.R:63:3', 'test_getVecOcc.R:7:4',
    'test_getVecOcc.R:75:3', 'test_getVecOcc.R:85:3', 'test_getVecOcc.R:102:3',
    'test_isAvailable.R:11:3', 'test_listData.R:11:3', 'test_listData.R:46:3',
    'test_listData.R:79:3', 'test_listData.R:106:3', 'test_listData.R:148:3',
    'test_plots.R:8:1', 'test_plots.R:33:1', 'test_plots.R:69:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test_extractRaster.R:205:3'): Output in same order as input ─────────
  Error in `names(namespaces) <- rep("", length(namespaces))`: Failed to connect to MAP geoserver. Please try again later. If this error keeps occurring please send us an email at data.malariaatlas.org@telethonkids.org.au
  Backtrace:
      ▆
   1. └─malariaAtlas::getPR(country = c("Nigeria", "Cameroon"), species = "Pf") at test_extractRaster.R:205:3
   2.   └─malariaAtlas:::getLatestPRPointVersion()
   3.     └─malariaAtlas::listPRPointVersions(printed = FALSE)
   4.       └─malariaAtlas:::get_wfs_clients()
   5.         └─base::tryCatch(...)
   6.           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   7.             └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   8.               └─value[[3L]](cond)
  ── Error ('test_getPR.R:130:3'): Version works ─────────────────────────────────
  Error in `names(namespaces) <- rep("", length(namespaces))`: Failed to connect to MAP geoserver. Please try again later. If this error keeps occurring please send us an email at data.malariaatlas.org@telethonkids.org.au
  Backtrace:
       ▆
    1. ├─testthat::expect_message(...) at test_getPR.R:130:3
    2. │ └─testthat:::quasi_capture(enquo(object), label, capture_messages)
    3. │   ├─testthat (local) .capture(...)
    4. │   │ └─base::withCallingHandlers(...)
    5. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
    6. └─malariaAtlas::getPR(species = "both", country = c("Kenya"))
    7.   └─malariaAtlas:::getLatestPRPointVersion()
    8.     └─malariaAtlas::listPRPointVersions(printed = FALSE)
    9.       └─malariaAtlas:::get_wfs_clients()
   10.         └─base::tryCatch(...)
   11.           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   12.             └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   13.               └─value[[3L]](cond)
  
  [ FAIL 2 | WARN 1 | SKIP 47 | PASS 31 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking re-building of vignette outputs ... [21s] ERROR
Error(s) in re-building vignettes:
--- re-building 'overview.Rmd' using rmarkdown

Quitting from lines 42-43 [unnamed-chunk-1] (overview.Rmd)
Error: processing vignette 'overview.Rmd' failed with diagnostics:
Failed to connect to MAP geoserver. Please try again later. If this error keeps occurring please send us an email at data.malariaatlas.org@telethonkids.org.au
--- failed re-building 'overview.Rmd'

SUMMARY: processing the following file failed:
  'overview.Rmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [18s] OK
* checking HTML version of manual ... [10s] OK
* DONE
Status: 2 ERRORs