Package: rChEA3
Title: R Client for the 'ChEA3' Transcription Factor Enrichment API
Version: 1.0.1
Authors@R: 
    person("Christophe", "Tav",
    email = "christophe.tav@gmail.com",
    role = c("aut", "cre"),
    comment = c(ORCID = "0000-0001-8808-9617"))
Description: Interface to the 'ChEA3' transcription factor enrichment API.
    'ChEA3' integrates evidence from ChIP-seq, co-expression, and literature
    resources to prioritize transcription factors regulating a given set
    of genes. This package provides convenient R functions to query the API,
    retrieve ranked results across collections (including integrated scores),
    and standardize output for downstream analysis in R/Bioconductor workflows.
    See <https://maayanlab.cloud/chea3/> or Keenan (2019) <doi:10.1093/nar/gkz446>
    for further details.
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 8.0.0
URL: https://github.com/ckntav/rChEA3, https://ckntav.github.io/rChEA3/
BugReports: https://github.com/ckntav/rChEA3/issues
Imports: cli, crayon, dplyr, ggplot2, httr, jsonlite, lubridate, rlang,
        tidyselect, writexl
Depends: R (>= 4.1.0)
LazyData: true
Suggests: knitr, readxl, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2026-05-28 04:32:53 UTC; chris
Author: Christophe Tav [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-8808-9617>)
Maintainer: Christophe Tav <christophe.tav@gmail.com>
Repository: CRAN
Date/Publication: 2026-05-28 04:50:03 UTC
Built: R 4.5.3; ; 2026-06-04 21:05:57 UTC; windows
