* using log directory 'd:/Rcompile/CRANpkg/local/4.5/medfateland.Rcheck' * using R Under development (unstable) (2024-07-14 r86899 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'medfateland/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'medfateland' version '2.4.3' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'medfateland' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 13.2.0' * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [7s] OK * checking whether the package can be loaded with stated dependencies ... [6s] OK * checking whether the package can be unloaded cleanly ... [7s] OK * checking whether the namespace can be loaded with stated dependencies ... [7s] OK * checking whether the namespace can be unloaded cleanly ... [7s] OK * checking loading without being on the library search path ... [7s] OK * checking whether startup messages can be suppressed ... [6s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [25s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: add_forests.Rd: sf, forest_mergeTrees, forest_mergeShrubs, SpParamsMED add_topography.Rd: sf, SpatRaster create_management_scenario.Rd: defaultManagementArguments, defaultManagementFunction defaultPrescriptionsBySpecies.Rd: defaultManagementArguments default_volume_function.Rd: forest dispersal.Rd: sf, forest, SpParamsMED, defaultControl example_ifn.Rd: sf example_watershed.Rd: sf extract_variables.Rd: sf, SpParamsMED, rast, forest, soil, summary.forest fire_regime_instance.Rd: sf fordyn_scenario.Rd: sf, forest, soil, spwbInput, growthInput, SpParamsMED, defaultControl, summary.fordyn, defaultManagementFunction, defaultManagementArguments forest_parametrization.Rd: sf, forest, rast, vect, forest_mergeTrees, forest_mergeShrubs initialize_landscape.Rd: spwb, growth, sf, forest, soil, SpParamsMED, defaultControl, forest_reduceToDominant, spwbInput, growthInput landscape_summary.Rd: sf, forest, soil, summary.forest plot_summary.Rd: rast, ggplot shinyplot_land.Rd: SpParamsMED, rast, sf simulation_summary.Rd: spwb, growth, fordyn, summary.spwb, sf soil_parametrization.Rd: sf, rast, vect spwb_land.Rd: spwb_day, growth_day, SpatRaster, sf, forest, soil, spwbInput, growthInput, SpParamsMED, defaultControl, fordyn spwb_land_day.Rd: spwb_day, growth_day, rast, sf, SpParamsMED, defaultControl spwb_spatial.Rd: spwb, growth, fordyn, sf, forest, soil, spwbInput, growthInput, SpParamsMED, defaultControl, spwb_day, growth_day, summary.spwb, meteoland spwb_spatial_day.Rd: spwb_day, growth_day, sf, SpParamsMED, defaultControl update_landscape.Rd: sf Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [7s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking examples ... [16s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [99s] OK Running 'testthat.R' [98s] * checking PDF version of manual ... [29s] OK * checking HTML version of manual ... [6s] OK * DONE Status: 1 NOTE