* using log directory 'd:/Rcompile/CRANpkg/local/4.4/automatedRecLin.Rcheck'
* using R version 4.4.3 (2025-02-28 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'automatedRecLin/DESCRIPTION' ... OK
* this is package 'automatedRecLin' version '1.0.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'automatedRecLin' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [4s] OK
* checking whether the package can be loaded with stated dependencies ... [4s] OK
* checking whether the package can be unloaded cleanly ... [4s] OK
* checking whether the namespace can be loaded with stated dependencies ... [4s] OK
* checking whether the namespace can be unloaded cleanly ... [4s] OK
* checking loading without being on the library search path ... [4s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [13s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [5s] ERROR
Running examples in 'automatedRecLin-Ex.R' failed
The error most likely occurred in:

> ### Name: custom_rec_lin_model
> ### Title: Create a Custom Record Linkage Model
> ### Aliases: custom_rec_lin_model
> 
> ### ** Examples
> 
> if (requireNamespace("xgboost", quietly = TRUE)) {
+   df_1 <- data.frame(
+     "name" = c("James", "Emma", "William", "Olivia", "Thomas",
+     "Sophie", "Harry", "Amelia", "George", "Isabella"),
+     "surname" = c("Smith", "Johnson", "Brown", "Taylor", "Wilson",
+     "Davis", "Clark", "Harris", "Lewis", "Walker")
+   )
+   df_2 <- data.frame(
+     "name" = c("James", "Ema", "Wimliam", "Olivia", "Charlotte",
+     "Henry", "Lucy", "Edward", "Alice", "Jack"),
+     "surname" = c("Smith", "Johnson", "Bron", "Tailor", "Moore",
+     "Evans", "Hall", "Wright", "Green", "King")
+   )
+   comparators <- list("name" = jarowinkler_complement(),
+                       "surname" = jarowinkler_complement())
+   matches <- data.frame("a" = 1:4, "b" = 1:4)
+   vectors <- comparison_vectors(A = df_1, B = df_2, variables = c("name", "surname"),
+                                comparators = comparators, matches = matches)
+   train_data <- xgboost::xgb.DMatrix(
+     data = as.matrix(vectors$Omega[, c("gamma_name", "gamma_surname")]),
+     label = vectors$Omega$match
+   )
+   params <- list(objective = "binary:logistic",
+                  eval_metric = "logloss")
+   model_xgb <- xgboost::xgboost(data = train_data, params = params,
+                                 nrounds = 100, verbose = 0)
+   custom_xgb_model <- custom_rec_lin_model(model_xgb, vectors)
+   custom_xgb_model
+ }
Warning in throw_err_or_depr_msg("Parameter(s) have been removed from this function: ",  :
  Parameter(s) have been removed from this function: params. This warning will become an error in a future version.
Warning in throw_err_or_depr_msg("Passed unrecognized parameters: ", paste(head(names_unrecognized),  :
  Passed unrecognized parameters: verbose. This warning will become an error in a future version.
Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '",  :
  Parameter 'data' has been renamed to 'x'. This warning will become an error in a future version.
Error in xgboost::xgboost(data = train_data, params = params, nrounds = 100,  : 
  argument "y" is missing, with no default
Calls: <Anonymous> -> process.y.margin.and.objective -> NROW
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [6s] ERROR
  Running 'tinytest.R' [6s]
Running the tests in 'tests/tinytest.R' failed.
Complete output:
  > if ( requireNamespace("tinytest", quietly=TRUE) ){
  +   tinytest::test_package("automatedRecLin", ncpu = 1)
  + }
  starting worker pid=77088 on localhost:11184 at 08:13:13.639
  
  test_comparators.R............    2 tests OK  98ms
  
  test_comparison_vectors.R.....    2 tests OK  45ms
  kliep function error: missing value where TRUE/FALSE needed 
  ========================================================
  kliep function error: missing value where TRUE/FALSE needed 
  ========================================================
  
  test_mec.R....................   11 tests OK  1.1s
  Error in checkForRemoteErrors(val) : 
    one node produced an error: argument "y" is missing, with no default
  Calls: <Anonymous> ... clusterApply -> staticClusterApply -> checkForRemoteErrors
  Warning messages:
  1: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) :
    There are duplicate values in 'sigma', only the unique values are used.
  
  2: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) :
    There are duplicate values in 'sigma', only the unique values are used.
  
  3: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) :
    There are duplicate values in 'sigma', only the unique values are used.
  
  4: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) :
    There are duplicate values in 'sigma', only the unique values are used.
  
  5: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) :
    There are duplicate values in 'sigma', only the unique values are used.
  
  6: In throw_err_or_depr_msg("Parameter(s) have been removed from this function: ",  :
    Parameter(s) have been removed from this function: params. This warning will become an error in a future version.
  7: In throw_err_or_depr_msg("Passed unrecognized parameters: ", paste(head(names_unrecognized),  :
    Passed unrecognized parameters: verbose. This warning will become an error in a future version.
  8: In throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '",  :
    Parameter 'data' has been renamed to 'x'. This warning will become an error in a future version.
  Execution halted
* checking PDF version of manual ... [18s] OK
* checking HTML version of manual ... [3s] OK
* DONE
Status: 2 ERRORs