qPCR Data Analysis

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Documentation for package ‘rtpcr’ version 2.1.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

ANOVA_DCt	Delta Ct ANOVA analysis with optional model specification
ANOVA_DDCt	Delta Delta Ct ANOVA analysis with optional model specification
compute_wDCt	Cleaning data and weighted delta Ct (wDCt) calculation
data_2factorBlock3ref	Sample data in (two factor with blocking factor and 3 reference genes)
efficiency	Amplification efficiency statistics and standard curves
long_to_wide	Converts a 4-column qPCR long data format to wide format
Means_DDCt	Delta Delta Ct pairwise comparisons using a fitted model
meanTech	Computing the mean of technical replicates
multiplot	Combine multiple ggplot objects into a single layout
plotFactor	Bar plot of gene expression for 1-, 2-, or 3-factor experiments
TTEST_DDCt	Delta Delta Ct method t-test analysis
WILCOX_DDCt	Delta Delta Ct method wilcox.test analysis