NetworkOptimizer        Network optimizer for corridor selection
UnionFind               Union-Find data structure
build_contiguous_raster
                        Build contiguous network raster (patches +
                        corridors)
build_corridor_raster   Create corridor raster from selected edges
build_graph_from_corridors
                        Build an igraph graph from patch ids and
                        corridor edges
build_patch_candidates
                        Build candidate edges between patches (centroid
                        distance)
build_raster_candidates
                        Build raster candidates using shortest paths
calculate_disturbance_penalty
                        Calculate disturbance penalty (diameter
                        normalized)
calculate_failure_probability
                        Estimate failure probability via edge removal
calculate_movement_entropy
                        Calculate movement entropy for a graph
calculate_topology_penalty
                        Calculate topology penalty (cycle count)
calculate_total_entropy
                        Calculate total entropy summary
calculate_two_edge_connectivity
                        Calculate the fraction of node pairs with two
                        edge-disjoint paths
label_patches           Label contiguous habitat patches
new_candidate           Create a candidate corridor descriptor
new_patch               Create a patch descriptor
optimize_largest_network
                        Optimize for largest connected network (MST
                        backbone + loops)
optimize_network        Optimize a network given nodes and candidate
                        edges
optimize_strategy       Choose optimization strategy
patch_summary_from_labels
                        Summarize patch labels into a data frame
raster_mask_from_values
                        Create a logical mask from raster values
run_raster_analysis     Run TerraLink raster workflow
run_vector_analysis     Run TerraLink vector workflow
score_edge_for_loops    Score a loop edge for shortcut value
select_circuit_utility
                        Select corridors for the "Most Connectivity"
                        strategy
terralink-package       terralink: Connectivity Corridor Optimization
terralink_engine        Run TerraLink optimization on abstract nodes
                        and edges
terralink_examples      Locate packaged TerraLink example scripts
terralink_raster        Run TerraLink corridor analysis on raster data
terralink_run           Run TerraLink with a single entry point
terralink_sample_data   Locate packaged TerraLink sample data files
terralink_vector        Run TerraLink corridor analysis on vector
                        patches
write_terralink_raster_outputs
                        Write raster outputs to disk
write_terralink_vector_outputs
                        Write vector outputs to disk
