Geometric Smoothing and Conditional Expectation Methods


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Documentation for package ‘geosmooth’ version 0.1.0

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A B C E F G H L M N P Q R S T V

geosmooth-package geosmooth package

-- A --

apply.metric.graph.lowpass.path Apply a Metric Graph Low-Pass Filter Path
as.data.frame.synthetic_dataset Summarize a synthetic dataset as one metadata row

-- B --

bootstrap.malps Bootstrap Uncertainty For A Fixed-Selection MALPS Fit

-- C --

compare.synthetic.dataset Compare two synthetic datasets scientifically

-- E --

edge.lengths.synthetic.geometry Exact latent-segment lengths under a synthetic geometry
embed.synthetic.geometry Embed latent coordinates through a synthetic geometry

-- F --

fit.chart.kernel Fit a Chart-Kernel Smoother
fit.density Fit a Density Estimator
fit.graph.trend.filtering Fit Graph Trend Filtering
fit.local.likelihood Fit a Local-Likelihood Density or Bernoulli Smoother
fit.lpl.tf Fit A Local Polynomial Lifting Trend Filter
fit.lps Fit a Local Polynomial Smoother
fit.malps Fit Model-Averaged Local Polynomial Smoothing
fit.metric.graph.lowpass Fit Metric-Conductance Graph Low-Pass Regression
fit.ps.lps Fit Prediction-Synchronized Local Polynomial Smoothing
fit.pttf.trend.filtering Fit A Parallel-Transport Trend Filter From A PTTF Operator
fit.slpl.tf Fit A Fixed-Operator Synchronized LPL-TF Model
fit.ssrhe.hessian.l1.regression Fit SSRHE-Style Hessian L1 Regression
fit.ssrhe.hessian.regression Fit SSRHE-Style Hessian-Energy Regression
fit.ssrhe.hessian.regression.cv Select SSRHE Hessian Regression Penalties by Label Cross-Validation
fit.ssrhe.hessian.regression.gcv Select SSRHE Hessian Regression Penalties by GCV
fit.subject.od Fit Subject-Occupation Density

-- G --

geosmooth geosmooth package
get.region.boundary Get Boundary Vertices of a Region in a Graph
graph.trend.filtering.operator Construct a Graph Trend-Filtering Operator

-- H --

harmonic.smoother Perform Harmonic Smoothing with Topology Tracking

-- L --

lpl.tf.operator Construct a Local Polynomial Lifting Trend-Filtering Operator
lps.backend.diagnostics Report LPS Backend and Chart-Dimension Diagnostics
lps.grouped.foldid Build a Cluster-Respecting Fold Assignment
lps.nested.cv Nested Cross-Validation for LPS with Explicit, Recorded Folds
lps.pointwise.band Pointwise Variance and Confidence Band for a Fixed-Configuration LPS Fit
lps.smoother.matrix Extract the Linear-Smoother Matrix of a Fixed-Configuration LPS Fit

-- M --

malps.gcv Compute MALPS Linear-Smoother Diagnostics
malps.smoother.matrix Construct The Conditional MALPS Smoother Matrix
materialize.synthetic Materialize a synthetic-data specification
materialize.synthetic.instance Materialize a frozen synthetic instance
metric.graph.heat.eta.grid Construct a Graph Heat-Time Grid
metric.graph.heat.extend.lower Propose a Guarded Lower Graph Heat Time
metric.graph.lowpass.basis Construct a Reusable Metric Graph Low-Pass Spectral Basis
metric.graph.lowpass.operator Construct a Metric-Conductance Graph Low-Pass Operator

-- N --

normalize.density Normalize Fitted Values Into a Density
normalize.density.default Normalize Fitted Values Into a Density
normalize.density.lps Normalize Fitted Values Into a Density
normalize.density.metric.graph.lowpass.fit Normalize Fitted Values Into a Density
normalize.density.metric.graph.lowpass.refit Normalize Fitted Values Into a Density
normalize.density.numeric Normalize Fitted Values Into a Density
normalize.density.ps_lps Normalize Fitted Values Into a Density

-- P --

perform.harmonic.smoothing Perform Harmonic Smoothing on Graph Function Values
plot.harmonic_smoother Plot Method for Harmonic Smoother Results
plot.synthetic_dataset Plot a canonical synthetic dataset
predict.lpl_tf Predict From A Local Polynomial Lifting Trend Filter
predict.lps Predict from an LPS Fit
predict.malps Predict From A MALPS Fit
predict.slpl_tf Predict From A Fixed-Operator Synchronized LPL-TF Model
print.harmonic_smoother Print Method for Harmonic Smoother Results
print.summary.harmonic_smoother Print Method for Summary of Harmonic Smoother Results
print.synthetic_dataset Print a canonical synthetic dataset
pttf.geometry Construct PTTF Local Geometry
pttf.operator Construct PTTF Transported-Difference Operators
pttf.operator.filter.rows Filter Rows Of A PTTF Operator

-- Q --

quadform.gradient Evaluate gradients of all quadforms
quadform.metric Evaluate the induced metric of a quadform geometry

-- R --

refit.lpl.tf Refit A Local Polynomial Lifting Trend Filter
refit.malps Refit A MALPS Smoother With A New Response
refit.metric.graph.lowpass Refit Metric-Conductance Graph Low-Pass Regression
refit.slpl.tf Refit A Fixed-Operator Synchronized LPL-TF Model
refit.ssrhe.hessian.l1.regression Refit SSRHE-Style Hessian L1 Regression
refit.ssrhe.hessian.regression Refit SSRHE-Style Hessian-Energy Regression

-- S --

slpl.tf.operator Construct A Synchronized LPL-TF Fixed Operator
ssrhe.hessian.operator Construct an SSRHE-Style Local Hessian Energy Operator
ssrhe.support.grid Build Candidate Support Profiles for SSRHE Adaptive-Radius Tuning
summary.harmonic_smoother Summary Method for Harmonic Smoother Results
synthetic.circle Specify a circle geometry
synthetic.dataset.checksum Compute the canonical content checksum of a synthetic dataset
synthetic.helix Specify a helix geometry
synthetic.point.line.junction Specify a point-line junction
synthetic.quadform Specify a quadform geometry
synthetic.registry.ids List maintained synthetic recipe IDs
synthetic.registry.seed Resolve the legacy seed for an SSRHE registry recipe
synthetic.registry.spec Resolve a maintained synthetic recipe
synthetic.response.bernoulli Bernoulli response specification
synthetic.response.clustered.gaussian Clustered Gaussian response specification
synthetic.response.gaussian Gaussian response specification
synthetic.response.heteroskedastic.gaussian Heteroskedastic Gaussian response specification
synthetic.response.laplace.outlier Laplace response with Gaussian contamination
synthetic.sampling.clustered Clustered sampling specification
synthetic.sampling.dirichlet.zeros Dirichlet sampling with structural zeros
synthetic.sampling.gapped.uniform Gapped-uniform sampling specification
synthetic.sampling.grid.interval Deterministic interval-grid sampling specification
synthetic.sampling.stratified Legacy G4 stratified sampling specification
synthetic.sampling.truncated.normal Truncated-normal sampling specification
synthetic.sampling.uniform.box Uniform-box sampling specification
synthetic.sampling.uniform.disk Uniform-disk sampling specification
synthetic.sampling.uniform.interval Uniform-interval sampling specification
synthetic.sampling.uniform.rectangle Uniform-rectangle sampling specification
synthetic.simplex Specify a simplex geometry
synthetic.spec Assemble a synthetic-data specification
synthetic.sphere.cap Specify a sphere-cap geometry
synthetic.stratified Assemble a stratified geometry
synthetic.stratum.point Specify a point stratum
synthetic.stratum.rectangle Specify a rectangle stratum
synthetic.stratum.segment Specify a line-segment stratum
synthetic.torus.patch Specify a torus-patch geometry
synthetic.trefoil Specify a trefoil-knot geometry
synthetic.truth.gaussian.mixture Specify a Gaussian-mixture truth
synthetic.truth.logit Specify a sinusoidal finite-design logit truth
synthetic.truth.named Specify a versioned named truth evaluator
synthetic.truth.occupation.mixture Specify a finite-design occupation-mixture truth
synthetic.truth.polynomial Specify a polynomial truth

-- T --

transported.graph.hessian.operator Construct a Transported Graph Hessian Operator

-- V --

validate.synthetic.dataset Validate a canonical synthetic dataset