biocohort-package	biocohort-package
AnalysisSpec	AnalysisSpec
analysis_files	analysis_files
analysis_list	analysis_list
analysis_register	analysis_register
analysis_spec	analysis_spec
analysis_spec_new	analysis_spec_new
apply_corrections	apply_corrections
as_coldata	as_coldata
biocohort	biocohort-package
check_paths	check_paths
Cohort	Cohort
cohort_contrasts	cohort_contrasts
cohort_derive	cohort_derive
cohort_filter	cohort_filter
cohort_groups	cohort_groups
cohort_new	cohort_new
cohort_qc	cohort_qc
cohort_read	cohort_read
cohort_save	cohort_save
completeness	completeness
corrections_log	corrections_log
derive_log	derive_log
ensure_dir	ensure_dir
example_cohort	example_cohort
join_metadata	join_metadata
liftover_backends	liftover_backends
liftover_crossmap	liftover_crossmap
liftover_intervals	liftover_intervals
liftover_rtracklayer	liftover_rtracklayer
liftover_vcf	liftover_vcf
load_analyses	load_analyses
load_analysis	load_analysis
manifest_from_wide	manifest_from_wide
orthologize	orthologize
ortholog_babelgene	ortholog_babelgene
ortholog_backends	ortholog_backends
ortholog_genes	ortholog_genes
project_path	project_path
project_root	project_root
qc_log	qc_log
read_corrections	read_corrections
read_dotenv	read_dotenv
read_manifest	read_manifest
read_manifest_csv	read_manifest_csv
read_study_yaml	read_study_yaml
register_liftover_backend	register_liftover_backend
register_ortholog_backend	register_ortholog_backend
samples	samples
sample_pairs	sample_pairs
sample_sheet	sample_sheet
sample_sheet_templates	sample_sheet_templates
Study	Study
study_new	study_new
Subject	Subject
subject	cohort-subject
subjects	subjects
subject_new	subject_new
translate	translate
TranslationResult	TranslationResult
translation_report	translation_report
translation_stats	translation_stats
validate_cohort	validate_cohort
validate_manifest	validate_manifest
write_manifest	write_manifest
write_study_yaml	write_study_yaml
