Query and Analyse the 'EWAS Atlas' Database
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Documentation for package ‘EWAScaller’ version 0.1.0
Help Pages
| autoplot.ewas_enrichment | Plot an EWAS Atlas enrichment result |
| autoplot.ewas_result | Plot summary statistics for an EWAS Atlas query result |
| ewas_enrichment | Run EWAS Atlas enrichment analysis on a set of CpG probes |
| example_cpgs | Example CpG probe list |
| plot_wordcloud | Word cloud of EWAS Atlas trait terms |
| plot_wordcloud.ewas_enrichment | Word cloud of EWAS Atlas trait terms |
| plot_wordcloud.ewas_result | Word cloud of EWAS Atlas trait terms |
| query_cpg | Query the EWAS Atlas by CpG probe identifier |
| query_gene | Query the EWAS Atlas by gene symbol |
| query_region | Query the EWAS Atlas by genomic region |
| summary.ewas_result | Summarise an EWAS Atlas query result |
| top_traits | Rank traits by association frequency |
| top_traits.ewas_enrichment | Rank traits by association frequency |
| top_traits.ewas_result | Rank traits by association frequency |